Conservation of cofitness between CSW01_10415 and CSW01_05925 in Vibrio cholerae E7946 ATCC 55056

115 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10415 succinate--CoA ligase subunit alpha 1.0 CSW01_05925 tryptophan synthase subunit alpha 0.71 15
Shewanella amazonensis SB2B 0.92 Sama_1430 succinyl-CoA synthetase alpha chain (RefSeq) 0.63 Sama_2134 trpA tryptophan synthase subunit alpha (RefSeq)
Alteromonas macleodii MIT1002 0.91 MIT1002_01951 Succinyl-CoA ligase [ADP-forming] subunit alpha 0.55 MIT1002_01425 Tryptophan synthase alpha chain
Shewanella loihica PV-4 0.91 Shew_1658 succinyl-CoA synthetase, alpha subunit (RefSeq) 0.64 Shew_2256 trpA tryptophan synthase subunit alpha (RefSeq)
Shewanella sp. ANA-3 0.90 Shewana3_1713 succinyl-CoA synthetase (ADP-forming) alpha subunit (RefSeq) 0.64 Shewana3_1515 trpA tryptophan synthase subunit alpha (RefSeq)
Enterobacter sp. TBS_079 0.90 MPMX20_01357 Succinate--CoA ligase [ADP-forming] subunit alpha 0.62 MPMX20_02514 Tryptophan synthase alpha chain low > 85
Pseudomonas sp. S08-1 0.90 OH686_01950 Succinyl-CoA ligase [ADP-forming] alpha chain 0.30 OH686_12430 tryptophan synthase, alpha subunit
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2263 succinyl-CoA synthetase, alpha subunit 0.62 EX28DRAFT_0932 tryptophan synthase, alpha chain (EC 4.2.1.20) low > 76
Pseudomonas aeruginosa MRSN321 0.90 DY961_RS19595 sucD;go_function=catalytic succinate--CoA ligase subunit alpha 0.29 DY961_RS26380 trpA;go_function=tryptophan tryptophan synthase subunit alpha
Pseudomonas aeruginosa PUPa3 0.90 DQ20_RS53710 sucD;go_function=catalytic succinate--CoA ligase subunit alpha 0.29 DQ20_RS58785 trpA;go_function=tryptophan tryptophan synthase subunit alpha
Pseudomonas aeruginosa PA14 0.90 IKLFDK_07610 succinate--CoA ligase subunit alpha 0.29 IKLFDK_25380 tryptophan synthase subunit alpha
Klebsiella pneumoniae MKP103 0.90 KDGMDA_16745 succinate--CoA ligase subunit alpha 0.62 KDGMDA_19545 tryptophan synthase subunit alpha low > 95
Shewanella oneidensis MR-1 0.90 SO1933 sucD succinyl-CoA synthase, alpha subunit (NCBI ptt file) 0.65 SO3024 trpA tryptophan synthase, alpha subunit (NCBI ptt file)
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF4642 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) 0.62 GFF2726 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 78
Klebsiella michiganensis M5al 0.89 BWI76_RS08430 succinate--CoA ligase subunit alpha 0.62 BWI76_RS11840 tryptophan synthase subunit alpha low > 92
Pseudomonas sp. SVBP6 0.89 COO64_RS18915 sucD succinate--CoA ligase subunit alpha 0.29 COO64_RS02270 trpA tryptophan synthase subunit alpha
Marinobacter adhaerens HP15 0.88 HP15_1525 succinyl-CoA synthetase, alpha subunit 0.30 HP15_1826 tryptophan synthase, alpha subunit
Pseudomonas segetis P6 0.88 MPMX49_02349 Succinate--CoA ligase [ADP-forming] subunit alpha 0.29 MPMX49_00374 Tryptophan synthase alpha chain
Pseudomonas sp. BP01 0.88 JOY50_RS19095 sucD succinate--CoA ligase subunit alpha 0.29 JOY50_RS21315 trpA tryptophan synthase subunit alpha
Pseudomonas putida KT2440 0.88 PP_4185 succinyl-CoA synthetase alpha subunit 0.29 PP_0082 tryptophan synthase alpha chain
Pseudomonas stutzeri RCH2 0.88 Psest_2490 succinyl-CoA synthetase, alpha subunit 0.31 Psest_0062 tryptophan synthase, alpha subunit low > 67
Pantoea agglomerans CFBP13505 P0401 0.88 PagCFBP13505_RS03575 succinate--CoA ligase subunit alpha 0.60 PagCFBP13505_RS07020 tryptophan synthase subunit alpha
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_2013 succinyl-CoA synthetase (ADP-forming) alpha subunit 0.28 Psyr_0033 tryptophan synthase, alpha chain
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_2013 succinyl-CoA synthetase (ADP-forming) alpha subunit 0.28 Psyr_0033 tryptophan synthase, alpha chain
Pantoea sp. MT58 0.88 IAI47_13730 succinate--CoA ligase subunit alpha 0.59 IAI47_09165 tryptophan synthase subunit alpha
Escherichia coli ECRC102 0.88 NIAGMN_04960 sucD succinate--CoA ligase subunit alpha 0.61 NIAGMN_26845 trpA tryptophan synthase subunit alpha low > 80
Escherichia coli Nissle 1917 0.88 ECOLIN_RS03885 succinate--CoA ligase subunit alpha 0.61 ECOLIN_RS07595 tryptophan synthase subunit alpha
Escherichia coli ECRC101 0.88 MCAODC_26130 sucD succinate--CoA ligase subunit alpha 0.61 MCAODC_15590 trpA tryptophan synthase subunit alpha low > 87
Escherichia fergusonii Becca 0.88 EFB2_03377 Succinate--CoA ligase [ADP-forming] subunit alpha 0.61 EFB2_02666 Tryptophan synthase alpha chain low > 86
Serratia liquefaciens MT49 0.88 IAI46_06290 succinate--CoA ligase subunit alpha 0.67 IAI46_14045 tryptophan synthase subunit alpha low > 87
Escherichia coli ECOR27 0.88 NOLOHH_23300 sucD succinate--CoA ligase subunit alpha 0.61 NOLOHH_20335 trpA tryptophan synthase subunit alpha low > 76
Escherichia coli ECRC99 0.88 KEDOAH_21055 sucD succinate--CoA ligase subunit alpha 0.61 KEDOAH_26075 trpA tryptophan synthase subunit alpha
Escherichia coli ECRC100 0.88 OKFHMN_06910 sucD succinate--CoA ligase subunit alpha 0.61 OKFHMN_02675 trpA tryptophan synthase subunit alpha low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_02988 Succinate--CoA ligase [ADP-forming] subunit alpha 0.61 OHPLBJKB_02423 Tryptophan synthase alpha chain low > 74
Escherichia coli BW25113 0.88 b0729 sucD succinyl-CoA synthetase subunit alpha (NCBI) 0.61 b1260 trpA tryptophan synthase subunit alpha (NCBI) low > 76
Escherichia coli ECOR38 0.88 HEPCGN_01320 sucD succinate--CoA ligase subunit alpha 0.61 HEPCGN_25515 trpA tryptophan synthase subunit alpha low > 88
Escherichia coli BL21 0.88 ECD_00688 succinyl-CoA synthetase, NAD(P)-binding, alpha subunit 0.61 ECD_01234 tryptophan synthase, alpha subunit 0.46 33
Escherichia coli ECRC62 0.88 BNILDI_21295 sucD succinate--CoA ligase subunit alpha 0.61 BNILDI_18480 trpA tryptophan synthase subunit alpha low > 75
Erwinia tracheiphila HP pepo 2.2 0.87 IJEDHG_02130 sucD succinate--CoA ligase subunit alpha 0.55 IJEDHG_23485 trpA tryptophan synthase subunit alpha
Kangiella aquimarina DSM 16071 0.87 B158DRAFT_1427 succinyl-CoA synthetase, alpha subunit 0.47 B158DRAFT_2430 tryptophan synthase, alpha chain (EC 4.2.1.20)
Erwinia tracheiphila SCR3 0.87 LU632_RS16080 sucD succinate--CoA ligase subunit alpha 0.56 LU632_RS12775 trpA tryptophan synthase subunit alpha
Pseudomonas sp. RS175 0.87 PFR28_03092 Succinate--CoA ligase [ADP-forming] subunit alpha 0.29 PFR28_04716 Tryptophan synthase alpha chain
Escherichia coli ECRC98 0.87 JDDGAC_10565 sucD succinate--CoA ligase subunit alpha 0.61 JDDGAC_05220 trpA tryptophan synthase subunit alpha low > 87
Pseudomonas sp. DMC3 0.87 GFF2524 Succinate--CoA ligase [ADP-forming] subunit alpha 0.30 GFF677 Tryptophan synthase alpha chain
Dickeya dadantii 3937 0.87 DDA3937_RS06475 succinate--CoA ligase subunit alpha 0.68 DDA3937_RS10460 tryptophan synthase subunit alpha 0.34 46
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_3685 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) 0.29 Pf1N1B4_1830 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.35 73
Dickeya dianthicola 67-19 0.87 HGI48_RS06515 succinate--CoA ligase subunit alpha 0.68 HGI48_RS10460 tryptophan synthase subunit alpha low > 71
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_5859 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) 0.29 Pf6N2E2_4047 Tryptophan synthase alpha chain (EC 4.2.1.20)
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_4265 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) 0.29 PfGW456L13_565 Tryptophan synthase alpha chain (EC 4.2.1.20)
Pectobacterium carotovorum WPP14 0.87 HER17_RS14915 succinate--CoA ligase subunit alpha 0.66 HER17_RS10940 tryptophan synthase subunit alpha low > 75
Erwinia amylovora T8 0.86 OLJFJH_16935 succinate--CoA ligase subunit alpha 0.61 OLJFJH_13470 tryptophan synthase subunit alpha low > 58
Dickeya dianthicola ME23 0.86 DZA65_RS06860 succinate--CoA ligase subunit alpha 0.68 DZA65_RS10940 tryptophan synthase subunit alpha low > 75
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_19715 succinyl-CoA synthetase subunit alpha 0.29 AO356_10910 tryptophan synthase subunit alpha
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_01815 succinyl-CoA synthetase subunit alpha 0.29 AO353_10705 tryptophan synthase subunit alpha
Rahnella sp. WP5 0.86 EX31_RS23455 succinate--CoA ligase subunit alpha 0.61 EX31_RS09980 tryptophan synthase subunit alpha low > 89
Pseudomonas fluorescens SBW25 0.86 PFLU_RS08975 succinate--CoA ligase subunit alpha 0.29 PFLU_RS00175 tryptophan synthase subunit alpha
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS08975 succinate--CoA ligase subunit alpha 0.29 PFLU_RS00175 tryptophan synthase subunit alpha
Pseudomonas lactucae CFBP13502 0.86 GEMAOFIL_01913 Succinate--CoA ligase [ADP-forming] subunit alpha 0.30 GEMAOFIL_00241 Tryptophan synthase alpha chain
Pseudomonas orientalis W4I3 0.86 QF045_RS11610 succinate--CoA ligase subunit alpha 0.29 QF045_RS03115 tryptophan synthase subunit alpha
Pseudomonas simiae WCS417 0.86 PS417_08915 succinyl-CoA synthetase subunit alpha 0.29 PS417_00180 tryptophan synthase subunit alpha
Acinetobacter radioresistens SK82 0.75 MPMX26_00755 Succinate--CoA ligase [ADP-forming] subunit alpha 0.29 MPMX26_02611 Tryptophan synthase alpha chain
Acinetobacter baumannii LAC-4 0.73 RR41_RS04065 succinate--CoA ligase subunit alpha 0.28 RR41_RS03140 tryptophan synthase subunit alpha low > 55
Dyella japonica UNC79MFTsu3.2 0.73 ABZR86_RS11020 succinate--CoA ligase subunit alpha 0.28 ABZR86_RS07995 tryptophan synthase subunit alpha
Methylophilus sp. DMC18 0.72 GFF786 Succinate--CoA ligase [ADP-forming] subunit alpha 0.28 GFF657 Tryptophan synthase alpha chain
Rhodanobacter denitrificans FW104-10B01 0.72 LRK54_RS04980 succinate--CoA ligase subunit alpha 0.27 LRK54_RS01680 tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data)
Rhodanobacter denitrificans MT42 0.72 LRK55_RS04760 succinate--CoA ligase subunit alpha 0.28 LRK55_RS01460 tryptophan synthase subunit alpha 0.81 49
Rhodanobacter sp. FW510-T8 0.72 OKGIIK_01765 sucD succinate--CoA ligase subunit alpha 0.28 OKGIIK_04850 trpA tryptophan synthase subunit alpha
Rhodanobacter sp000427505 FW510-R12 0.71 LRK53_RS05030 succinate--CoA ligase subunit alpha 0.28 LRK53_RS08355 tryptophan synthase subunit alpha
Dinoroseobacter shibae DFL-12 0.69 Dshi_2882 succinyl-CoA synthetase, alpha subunit (RefSeq) 0.30 Dshi_0952 tryptophan synthase, alpha subunit (RefSeq)
Magnetospirillum magneticum AMB-1 0.68 AMB_RS20035 succinate--CoA ligase subunit alpha 0.29 AMB_RS20300 tryptophan synthase subunit alpha
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.1356.1 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) 0.26 Xcc-8004.1967.1 Tryptophan synthase alpha chain (EC 4.2.1.20)
Lysobacter sp. OAE881 0.67 ABIE51_RS04865 succinate--CoA ligase subunit alpha 0.31 ABIE51_RS08265 tryptophan synthase subunit alpha
Sphingobium sp. HT1-2 0.67 GFF2449 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) 0.32 GFF1627 Tryptophan synthase alpha chain (EC 4.2.1.20)
Rhodospirillum rubrum S1H 0.67 Rru_A1212 Succinyl-CoA ligase, alpha subunit (NCBI) 0.26 Rru_A3428 Tryptophan synthase (NCBI)
Caulobacter crescentus NA1000 Δfur 0.66 CCNA_00341 succinyl-CoA synthetase alpha chain 0.28 CCNA_03657 tryptophan synthase alpha chain
Caulobacter crescentus NA1000 0.66 CCNA_00341 succinyl-CoA synthetase alpha chain 0.28 CCNA_03657 tryptophan synthase alpha chain
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS31380 succinate--CoA ligase 0.32 RR42_RS14350 tryptophan synthase alpha chain
Bosea sp. OAE506 0.66 ABIE41_RS08970 succinate--CoA ligase subunit alpha 0.29 ABIE41_RS03930 tryptophan synthase subunit alpha
Rhodopseudomonas palustris CGA009 0.66 TX73_000985 succinate--CoA ligase subunit alpha 0.29 TX73_000365 tryptophan synthase subunit alpha
Sphingomonas koreensis DSMZ 15582 0.66 Ga0059261_1340 succinyl-CoA synthetase, alpha subunit 0.26 Ga0059261_0239 tryptophan synthase, alpha chain (EC 4.2.1.20)
Phaeobacter inhibens DSM 17395 0.66 PGA1_c03610 succinyl-CoA ligase [ADP-forming] subunit alpha 0.30 PGA1_c04930 tryptophan synthase alpha chain
Xanthobacter sp. DMC5 0.65 GFF4409 Succinate--CoA ligase [ADP-forming] subunit alpha 0.28 GFF3884 Tryptophan synthase alpha chain
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS20400 succinate--CoA ligase subunit alpha 0.29 QEN71_RS17655 tryptophan synthase subunit alpha low > 153
Azospirillum sp. SherDot2 0.65 MPMX19_00105 Succinate--CoA ligase [ADP-forming] subunit alpha 0.28 MPMX19_02737 Tryptophan synthase alpha chain
Azospirillum brasilense Sp245 0.65 AZOBR_RS14070 succinyl-CoA synthetase subsunit alpha 0.31 AZOBR_RS00520 tryptophan synthase subunit alpha low > 97
Rhizobium sp. OAE497 0.62 ABIE40_RS17990 succinate--CoA ligase subunit alpha 0.27 ABIE40_RS19340 tryptophan synthase subunit alpha
Sinorhizobium meliloti 1021 0.60 SMc02481 succinyl-CoA synthetase subunit alpha 0.26 SMc02765 tryptophan synthase subunit alpha
Bacteroides ovatus ATCC 8483 0.59 BACOVA_02526 succinate-CoA ligase, alpha subunit 0.25 BACOVA_03785 tryptophan synthase, alpha subunit low > 96
Bacteroides thetaiotaomicron VPI-5482 0.59 BT0787 succinyl-CoA synthetase alpha chain (NCBI ptt file) 0.25 BT0527 tryptophan synthase alpha chain (NCBI ptt file) low > 81
Agrobacterium fabrum C58 0.59 Atu2637 succinyl-CoA synthetase alpha chain 0.25 Atu0019 tryptophan synthase alpha subunit
Variovorax sp. OAS795 0.58 ABID97_RS24470 succinate--CoA ligase subunit alpha 0.26 ABID97_RS08425 tryptophan synthase subunit alpha low > 91
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS07985 succinate--CoA ligase subunit alpha 0.31 ABZR87_RS14490 tryptophan synthase subunit alpha
Ralstonia solanacearum UW163 0.57 UW163_RS01605 succinate--CoA ligase subunit alpha 0.32 UW163_RS11150 tryptophan synthase subunit alpha
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS12030 succinate--CoA ligase subunit alpha 0.32 RALBFv3_RS02575 tryptophan synthase subunit alpha
Ralstonia solanacearum PSI07 0.57 RPSI07_RS21240 succinate--CoA ligase subunit alpha 0.32 RPSI07_RS14740 tryptophan synthase subunit alpha
Ralstonia solanacearum GMI1000 0.57 RS_RS02780 succinate--CoA ligase subunit alpha 0.32 RS_RS09955 tryptophan synthase subunit alpha low > 80
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS03285 succinyl-CoA synthetase subsunit alpha 0.28 HSERO_RS16470 tryptophan synthase subunit alpha low > 78
Castellaniella sp019104865 MT123 0.56 ABCV34_RS04430 succinate--CoA ligase subunit alpha 0.29 ABCV34_RS08430 tryptophan synthase subunit alpha
Paraburkholderia graminis OAS925 0.55 ABIE53_003444 succinyl-CoA synthetase alpha subunit 0.29 ABIE53_004811 tryptophan synthase alpha chain low > 113
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS16340 succinyl-CoA synthetase subunit alpha 0.28 BPHYT_RS33865 tryptophan synthase alpha chain low > 109
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_04204 succinyl-CoA synthetase (ADP-forming) alpha subunit 0.28 H281DRAFT_06065 tryptophan synthase, alpha chain
Dechlorosoma suillum PS 0.55 Dsui_1446 succinyl-CoA synthetase, alpha subunit 0.32 Dsui_3191 tryptophan synthase, alpha subunit
Variovorax sp. SCN45 0.55 GFF5406 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) 0.28 GFF3882 Tryptophan synthase alpha chain (EC 4.2.1.20)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF2505 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) 0.29 GFF3354 Tryptophan synthase alpha chain (EC 4.2.1.20)
Acidovorax sp. GW101-3H11 0.55 Ac3H11_1251 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) 0.30 Ac3H11_1535 Tryptophan synthase alpha chain (EC 4.2.1.20)
Echinicola vietnamensis KMM 6221, DSM 17526 0.55 Echvi_0015 succinyl-CoA synthetase, alpha subunit 0.27 Echvi_2511 tryptophan synthase, alpha subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.53 A4249_RS14425 succinate--CoA ligase subunit alpha 0.27 A4249_RS11320 tryptophan synthase subunit alpha
Methanococcus maripaludis JJ 0.53 MMJJ_RS00185 succinate--CoA ligase subunit alpha 0.29 MMJJ_RS09195 tryptophan synthase subunit alpha
Methanococcus maripaludis S2 0.53 MMP_RS04950 succinate--CoA ligase subunit alpha 0.29 MMP_RS05185 tryptophan synthase subunit alpha
Cellulophaga baltica 18 0.53 M666_RS17185 succinate--CoA ligase subunit alpha 0.24 M666_RS09060 tryptophan synthase subunit alpha low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.52 CA265_RS15540 succinate--CoA ligase subunit alpha 0.25 CA265_RS05025 tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.51 ABZR88_RS20550 succinate--CoA ligase subunit alpha 0.26 ABZR88_RS10660 tryptophan synthase subunit alpha
Pontibacter actiniarum KMM 6156, DSM 19842 0.50 CA264_13760 succinate--CoA ligase subunit alpha 0.24 CA264_05085 tryptophan synthase subunit alpha
Mycobacterium tuberculosis H37Rv 0.49 Rv0952 Probable succinyl-CoA synthetase (alpha chain) SucD (SCS-alpha) 0.18 Rv1613 Probable tryptophan synthase, alpha subunit TrpA
Bifidobacterium breve UCC2003 0.46 BBR_RS15680 succinate--CoA ligase subunit alpha 0.25 BBR_RS15810 tryptophan synthase subunit alpha low > 34
Synechocystis sp000284455 PCC 6803 0.25 SGL_RS11225 CoA-binding protein 0.30 SGL_RS03395 tryptophan synthase subunit alpha

Not shown: 0 genomes with orthologs for CSW01_10415 only; 7 genomes with orthologs for CSW01_05925 only