Conservation of cofitness between Atu1308 and Atu3755 in Agrobacterium fabrum C58

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1308 aspartate carbamoyl transferase catalytic subunit 1.0 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.89 13
Sinorhizobium meliloti 1021 0.91 SMc01360 aspartate carbamoyltransferase catalytic subunit 0.66 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.86 8
Rhizobium sp. OAE497 0.89 ABIE40_RS07385 aspartate carbamoyltransferase catalytic subunit 0.69 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase
Bosea sp. OAE506 0.75 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit 0.42 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase 0.60 6
Rhodopseudomonas palustris CGA009 0.68 TX73_016120 aspartate carbamoyltransferase catalytic subunit 0.42 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodospirillum rubrum S1H 0.67 Rru_A3190 Aspartate carbamoyltransferase (NCBI) 0.40 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) 0.46 50
Magnetospirillum magneticum AMB-1 0.67 AMB_RS18300 aspartate carbamoyltransferase 0.38 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase
Azospirillum sp. SherDot2 0.67 MPMX19_01054 Aspartate carbamoyltransferase 0.39 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase
Azospirillum brasilense Sp245 0.66 AZOBR_RS20575 aspartate carbamoyltransferase 0.42 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase
Phaeobacter inhibens DSM 17395 0.65 PGA1_c03060 aspartate carbamoyltransferase PyrB 0.46 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK 0.87 13
Dinoroseobacter shibae DFL-12 0.64 Dshi_3091 aspartate carbamoyltransferase (RefSeq) 0.48 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.77 17
Sphingomonas koreensis DSMZ 15582 0.61 Ga0059261_0076 aspartate carbamoyltransferase (EC 2.1.3.2) 0.39 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02525 aspartate carbamoyltransferase 0.45 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit low > 67
Caulobacter crescentus NA1000 0.61 CCNA_02525 aspartate carbamoyltransferase 0.45 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.90 13
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS04260 aspartate carbamoyltransferase catalytic subunit 0.43 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum UW163 0.53 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit 0.31 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit 0.31 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS15860 aspartate carbamoyltransferase catalytic subunit 0.35 RR42_RS03230 phosphoribosylaminoimidazole carboxylase
Ralstonia solanacearum PSI07 0.53 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit 0.32 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit 0.32 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum GMI1000 0.53 RS_RS03410 aspartate carbamoyltransferase 0.32 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS25780 aspartate carbamoyltransferase catalytic subunit 0.37 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase low > 153
Pseudomonas stutzeri RCH2 0.52 Psest_0291 aspartate carbamoyltransferase 0.38 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein
Paraburkholderia graminis OAS925 0.52 ABIE53_001131 aspartate carbamoyltransferase catalytic subunit 0.37 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_04817 aspartate carbamoyltransferase 0.37 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas sp. S08-1 0.52 OH686_10940 aspartate carbamoyltransferase 0.38 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS04235 aspartate carbamoyltransferase 0.37 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 0.25 61
Marinobacter adhaerens HP15 0.52 HP15_3507 aspartate carbamoyltransferase 0.34 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit
Acidovorax sp. GW101-3H11 0.51 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.31 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Dechlorosoma suillum PS 0.51 Dsui_0596 aspartate carbamoyltransferase 0.32 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein
Variovorax sp. SCN45 0.51 GFF2160 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.36 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) low > 127
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_08135 aspartate carbamoyltransferase catalytic subunit 0.36 AO353_09935 phosphoribosylaminoimidazole carboxylase
Pseudomonas simiae WCS417 0.51 PS417_26700 aspartate carbamoyltransferase catalytic subunit 0.36 PS417_28115 phosphoribosylaminoimidazole carboxylase
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.38 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.36 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_13450 aspartate carbamoyltransferase catalytic subunit 0.37 AO356_11075 phosphoribosylaminoimidazole carboxylase
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU2901 pyrB aspartate carbamoyltransferase (TIGR) 0.15 DVU0723 purT phosphoribosylglycinamide formyltransferase 2 (TIGR)
Pseudomonas sp. RS175 0.51 PFR28_04237 Aspartate carbamoyltransferase 0.38 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_0482 aspartate carbamoyltransferase 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_0482 aspartate carbamoyltransferase 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas fluorescens SBW25 0.51 PFLU_RS28345 aspartate carbamoyltransferase 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.36 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS28345 aspartate carbamoyltransferase 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase
Variovorax sp. OAS795 0.50 ABID97_RS24660 aspartate carbamoyltransferase catalytic subunit 0.34 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas putida KT2440 0.50 PP_4998 Aspartate carbamoyltransferase 0.38 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.34 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS02330 aspartate carbamoyltransferase 0.40 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase
Echinicola vietnamensis KMM 6221, DSM 17526 0.49 Echvi_4661 aspartate carbamoyltransferase 0.29 Echvi_0884 phosphoribosylaminoimidazole carboxylase, PurK protein
Pedobacter sp. GW460-11-11-14-LB5 0.48 CA265_RS14660 aspartate carbamoyltransferase 0.26 CA265_RS07745 5-(carboxyamino)imidazole ribonucleotide synthase
Pontibacter actiniarum KMM 6156, DSM 19842 0.47 CA264_20465 aspartate carbamoyltransferase 0.28 CA264_12600 5-(carboxyamino)imidazole ribonucleotide synthase low > 74
Desulfovibrio vulgaris Miyazaki F 0.47 DvMF_1425 pyrB aspartate carbamoyltransferase catalytic subunit (RefSeq) 0.16 DvMF_2756 purT phosphoribosylglycinamide formyltransferase 2 (RefSeq) low > 51
Mucilaginibacter yixingensis YX-36 DSM 26809 0.47 ABZR88_RS03460 aspartate carbamoyltransferase catalytic subunit 0.27 ABZR88_RS09290 5-(carboxyamino)imidazole ribonucleotide synthase
Mycobacterium tuberculosis H37Rv 0.46 Rv1380 Probable aspartate carbamoyltransferase PyrB (ATCase) (aspartate transcarbamylase) 0.25 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC)
Acinetobacter radioresistens SK82 0.46 MPMX26_01099 Aspartate carbamoyltransferase 0.38 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase low > 36
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit 0.36 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit 0.33 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodanobacter denitrificans MT42 0.42 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit 0.34 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit 0.35 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.36 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Lysobacter sp. OAE881 0.41 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit 0.37 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 25
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_0670 pyrB aspartate carbamoyltransferase catalytic subunit 0.30 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit
Methanococcus maripaludis JJ 0.24 MMJJ_RS05825 aspartate carbamoyltransferase 0.17 MMJJ_RS04770 formate-dependent phosphoribosylglycinamide formyltransferase
Methanococcus maripaludis S2 0.24 MMP_RS08545 aspartate carbamoyltransferase 0.18 MMP_RS00715 formate-dependent phosphoribosylglycinamide formyltransferase
Bifidobacterium breve UCC2003 0.23 BBR_RS15425 aspartate carbamoyltransferase 0.31 BBR_RS13300 5-(carboxyamino)imidazole ribonucleotide synthase low > 34
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.24 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) low > 78
Escherichia coli ECRC99 0.23 KEDOAH_16290 pyrB aspartate carbamoyltransferase 0.24 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli BW25113 0.23 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) 0.24 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.86 11
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit 0.24 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase low > 73
Escherichia coli ECRC102 0.23 NIAGMN_09715 pyrB aspartate carbamoyltransferase 0.24 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli Nissle 1917 0.23 ECOLIN_RS24625 aspartate carbamoyltransferase 0.24 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase low > 52
Escherichia coli ECOR38 0.23 HEPCGN_10060 pyrB aspartate carbamoyltransferase 0.24 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 85
Escherichia coli ECRC98 0.23 JDDGAC_15505 pyrB aspartate carbamoyltransferase 0.24 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia fergusonii Becca 0.23 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit 0.24 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase low > 86
Escherichia coli ECRC62 0.23 BNILDI_07385 pyrB aspartate carbamoyltransferase 0.24 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli ECOR27 0.23 NOLOHH_04125 pyrB aspartate carbamoyltransferase 0.24 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 57
Escherichia coli BL21 0.23 ECD_04113 aspartate carbamoyltransferase, catalytic subunit 0.24 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.74 10
Escherichia coli ECRC101 0.23 OKFHMN_11865 pyrB aspartate carbamoyltransferase 0.24 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli ECRC101 0.23 MCAODC_02370 pyrB aspartate carbamoyltransferase 0.24 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Enterobacter asburiae PDN3 0.22 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) 0.23 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein
Klebsiella michiganensis M5al 0.22 BWI76_RS02995 aspartate carbamoyltransferase 0.24 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.57 13
Enterobacter sp. TBS_079 0.22 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.24 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.82 45
Pantoea sp. MT58 0.22 IAI47_16860 aspartate carbamoyltransferase 0.26 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.96 10
Serratia liquefaciens MT49 0.22 IAI46_02275 aspartate carbamoyltransferase 0.22 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.69 41
Dickeya dadantii 3937 0.22 DDA3937_RS01925 aspartate carbamoyltransferase 0.23 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.74 31
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS01350 aspartate carbamoyltransferase 0.15 HMPREF1078_RS10980 formate-dependent phosphoribosylglycinamide formyltransferase
Erwinia tracheiphila SCR3 0.22 LU632_RS20950 pyrB aspartate carbamoyltransferase 0.22 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.85 15
Dickeya dianthicola ME23 0.22 DZA65_RS01970 aspartate carbamoyltransferase 0.23 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 61
Vibrio cholerae E7946 ATCC 55056 0.21 CSW01_12725 aspartate carbamoyltransferase 0.28 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase low > 62
Pectobacterium carotovorum WPP14 0.21 HER17_RS19510 aspartate carbamoyltransferase 0.23 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.96 27
Phocaeicola dorei CL03T12C01 0.21 ABI39_RS17400 aspartate carbamoyltransferase 0.14 ABI39_RS14185 formate-dependent phosphoribosylglycinamide formyltransferase
Dickeya dianthicola 67-19 0.21 HGI48_RS01900 aspartate carbamoyltransferase 0.24 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.76 20
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS03820 aspartate carbamoyltransferase 0.14 HMPREF1058_RS17920 formate-dependent phosphoribosylglycinamide formyltransferase
Alteromonas macleodii MIT1002 0.21 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain 0.26 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.90 31
Rahnella sp. WP5 0.21 EX31_RS12785 aspartate carbamoyltransferase 0.23 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.86 65
Bacteroides stercoris CC31F 0.21 HMPREF1181_RS14990 aspartate carbamoyltransferase 0.15 HMPREF1181_RS16250 formate-dependent phosphoribosylglycinamide formyltransferase low > 56
Bacteroides ovatus ATCC 8483 0.21 BACOVA_02450 aspartate carbamoyltransferase 0.14 BACOVA_02411 phosphoribosylglycinamide formyltransferase 2
Bacteroides thetaiotaomicron VPI-5482 0.21 BT0742 aspartate carbamoyltransferase catalytic chain (NCBI ptt file) 0.15 BT0704 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file)
Shewanella oneidensis MR-1 0.20 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) 0.25 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.84 17
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_0021 aspartate carbamoyltransferase (EC 2.1.3.2) 0.27 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase
Shewanella sp. ANA-3 0.20 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.23 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.84 62
Shewanella loihica PV-4 0.20 Shew_1013 aspartate carbamoyltransferase (RefSeq) 0.25 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) low > 60
Shewanella amazonensis SB2B 0.19 Sama_0840 aspartate carbamoyltransferase (RefSeq) 0.23 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.58 19

Not shown: 1 genomes with orthologs for Atu1308 only; 1 genomes with orthologs for Atu3755 only