Conservation of cofitness between BT3758 and BT1857 in Bacteroides thetaiotaomicron VPI-5482

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT3758 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) 1.0 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.86 11
Bacteroides ovatus ATCC 8483 0.95 BACOVA_03588 aminotransferase, class III 0.99 BACOVA_04600 3-isopropylmalate dehydrogenase 0.94 18
Bacteroides stercoris CC31F 0.87 HMPREF1181_RS03445 aspartate aminotransferase family protein 0.93 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.90 33
Phocaeicola vulgatus CL09T03C04 0.83 HMPREF1058_RS08835 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.96 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.62 20
Phocaeicola dorei CL03T12C01 0.83 ABI39_RS02965 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.96 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.77 17
Parabacteroides merdae CL09T00C40 0.75 HMPREF1078_RS10585 aspartate aminotransferase family protein 0.91 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.96 10
Mucilaginibacter yixingensis YX-36 DSM 26809 0.63 ABZR88_RS15500 aspartate aminotransferase family protein 0.48 ABZR88_RS11605 3-isopropylmalate dehydrogenase
Pedobacter sp. GW460-11-11-14-LB5 0.58 CA265_RS18530 aspartate aminotransferase family protein 0.48 CA265_RS15850 3-isopropylmalate dehydrogenase 0.88 23
Pontibacter actiniarum KMM 6156, DSM 19842 0.56 CA264_06245 aspartate aminotransferase family protein 0.55 CA264_09445 3-isopropylmalate dehydrogenase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.53 Echvi_3848 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.57 Echvi_2062 3-isopropylmalate dehydrogenase
Acidovorax sp. GW101-3H11 0.36 Ac3H11_1332 Acetylornithine aminotransferase (EC 2.6.1.11) 0.40 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
Variovorax sp. OAS795 0.34 ABID97_RS08635 aspartate aminotransferase family protein 0.41 ABID97_RS08455 3-isopropylmalate dehydrogenase
Pseudomonas sp. RS175 0.34 PFR28_00252 Acetylornithine aminotransferase 0.42 PFR28_02821 3-isopropylmalate dehydrogenase 0.30 11
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_17010 acetylornithine aminotransferase 0.42 AO356_21415 3-isopropylmalate dehydrogenase low > 104
Variovorax sp. SCN45 0.34 GFF3927 N-acetylornithine aminotransferase (EC 2.6.1.11) 0.41 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_5326 Acetylornithine aminotransferase (EC 2.6.1.11) 0.42 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_2358 acetylornithine aminotransferase apoenzyme 0.42 Psyr_1985 3-isopropylmalate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_2358 acetylornithine aminotransferase apoenzyme 0.42 Psyr_1985 3-isopropylmalate dehydrogenase low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF3420 Acetylornithine aminotransferase (EC 2.6.1.11) 0.40 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 90
Pseudomonas fluorescens SBW25 0.33 PFLU_RS07995 aspartate aminotransferase family protein 0.41 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS07995 aspartate aminotransferase family protein 0.41 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_4910 Acetylornithine aminotransferase (EC 2.6.1.11) 0.42 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 87
Pseudomonas simiae WCS417 0.33 PS417_08025 acetylornithine aminotransferase 0.41 PS417_18585 3-isopropylmalate dehydrogenase low > 88
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2980 Acetylornithine aminotransferase (EC 2.6.1.11) 0.42 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 87
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_15640 acetylornithine aminotransferase 0.42 AO353_20635 3-isopropylmalate dehydrogenase low > 101
Acinetobacter radioresistens SK82 0.31 MPMX26_01057 Acetylornithine aminotransferase 0.41 MPMX26_00348 3-isopropylmalate dehydrogenase low > 36
Sinorhizobium meliloti 1021 0.31 SMc02138 acetylornithine transaminase 0.33 SMc04405 3-isopropylmalate dehydrogenase 0.90 24
Pantoea sp. MT58 0.31 IAI47_01955 aspartate aminotransferase family protein 0.39 IAI47_16005 3-isopropylmalate dehydrogenase 0.69 41
Agrobacterium fabrum C58 0.31 Atu0428 acetylornithine aminotransferase 0.33 Atu2791 3-isopropylmalate dehydrogenase
Erwinia tracheiphila SCR3 0.31 LU632_RS22810 aspartate aminotransferase family protein 0.38 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase low > 74
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_13250 aspartate aminotransferase family protein 0.41 CSW01_12600 3-isopropylmalate dehydrogenase low > 62
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_3205 transaminase, acetylornithine/succinylornithine family 0.36 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.97 21
Rahnella sp. WP5 0.31 EX31_RS04630 aspartate aminotransferase family protein 0.42 EX31_RS03685 3-isopropylmalate dehydrogenase 0.87 35
Escherichia coli Nissle 1917 0.30 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.43 ECOLIN_RS00395 3-isopropylmalate dehydrogenase low > 52
Methanococcus maripaludis JJ 0.30 MMJJ_RS08660 acetylornithine transaminase 0.28 MMJJ_RS00560 homoisocitrate dehydrogenase low > 28
Dechlorosoma suillum PS 0.30 Dsui_3250 acetylornithine/succinylornithine aminotransferase 0.41 Dsui_3198 3-isopropylmalate dehydrogenase
Rhizobium sp. OAE497 0.30 ABIE40_RS02320 aspartate aminotransferase family protein 0.33 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.95 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.42 OHPLBJKB_03584 3-isopropylmalate dehydrogenase low > 73
Escherichia fergusonii Becca 0.30 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.43 EFB2_03972 3-isopropylmalate dehydrogenase low > 86
Escherichia coli ECRC101 0.30 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.43 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase
Escherichia coli ECRC101 0.30 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.43 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS23375 aspartate aminotransferase family protein 0.38 QEN71_RS17620 3-isopropylmalate dehydrogenase
Escherichia coli ECOR38 0.30 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.43 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase low > 85
Escherichia coli ECRC99 0.30 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.43 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase
Escherichia coli ECRC102 0.30 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.43 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase
Pectobacterium carotovorum WPP14 0.30 HER17_RS01910 aspartate aminotransferase family protein 0.41 HER17_RS03080 3-isopropylmalate dehydrogenase low > 75
Escherichia coli ECRC98 0.30 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.43 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase
Methanococcus maripaludis S2 0.30 MMP_RS05690 acetylornithine transaminase 0.28 MMP_RS04575 homoisocitrate dehydrogenase
Escherichia coli BL21 0.30 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.42 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent low > 60
Marinobacter adhaerens HP15 0.30 HP15_3042 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.40 HP15_1832 3-isopropylmalate dehydrogenase 0.69 52
Escherichia coli BW25113 0.30 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.42 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) low > 76
Escherichia coli ECOR27 0.30 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.42 NOLOHH_03065 leuA 2-isopropylmalate synthase low > 57
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS07695 acetylornithine aminotransferase 0.38 BPHYT_RS33900 3-isopropylmalate dehydrogenase
Enterobacter sp. TBS_079 0.30 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.43 MPMX20_00768 3-isopropylmalate dehydrogenase 0.60 26
Bifidobacterium breve UCC2003 0.30 BBR_RS13900 acetylornithine transaminase 0.27 BBR_RS12870 3-isopropylmalate dehydrogenase low > 34
Escherichia coli ECRC62 0.30 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.42 BNILDI_08545 leuA 2-isopropylmalate synthase
Paraburkholderia graminis OAS925 0.30 ABIE53_001769 succinylornithine aminotransferase 0.37 ABIE53_004804 3-isopropylmalate dehydrogenase low > 113
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.32 CCNA_00193 3-isopropylmalate dehydrogenase low > 67
Caulobacter crescentus NA1000 0.30 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.32 CCNA_00193 3-isopropylmalate dehydrogenase low > 66
Serratia liquefaciens MT49 0.29 IAI46_15335 aspartate aminotransferase family protein 0.41 IAI46_03350 3-isopropylmalate dehydrogenase low > 86
Dickeya dadantii 3937 0.29 DDA3937_RS19450 aspartate aminotransferase family protein 0.42 DDA3937_RS18120 3-isopropylmalate dehydrogenase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.43 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 78
Dickeya dianthicola ME23 0.29 DZA65_RS20655 aspartate aminotransferase family protein 0.41 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.70 46
Enterobacter asburiae PDN3 0.29 EX28DRAFT_1752 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.44 EX28DRAFT_3669 3-isopropylmalate dehydrogenase low > 76
Synechococcus elongatus PCC 7942 0.29 Synpcc7942_0943 argD acetylornithine aminotransferase 0.39 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase
Rhodopseudomonas palustris CGA009 0.29 TX73_024810 aspartate aminotransferase family protein 0.32 TX73_001175 3-isopropylmalate dehydrogenase
Bosea sp. OAE506 0.29 ABIE41_RS04340 aspartate aminotransferase family protein 0.34 ABIE41_RS11860 3-isopropylmalate dehydrogenase
Dickeya dianthicola 67-19 0.29 HGI48_RS19570 aspartate aminotransferase family protein 0.42 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.75 50
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_06478 succinylornithine aminotransferase apoenzyme 0.38 H281DRAFT_06072 3-isopropylmalate dehydrogenase low > 103
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU2347 argD acetylornithine aminotransferase (TIGR) 0.43 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.91 13
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS11925 aspartate aminotransferase family protein 0.43 A4249_RS09995 3-isopropylmalate dehydrogenase
Mycobacterium tuberculosis H37Rv 0.29 Rv1655 Probable acetylornithine aminotransferase ArgD 0.25 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH)
Klebsiella michiganensis M5al 0.29 BWI76_RS26000 aspartate aminotransferase family protein 0.43 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.69 29
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS17400 acetylornithine transaminase 0.40 ABZR86_RS15950 3-isopropylmalate dehydrogenase low > 74
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS04500 acetyl ornithine aminotransferase family protein 0.41 LRK54_RS10325 3-isopropylmalate dehydrogenase low > 59
Shewanella amazonensis SB2B 0.28 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.40 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.58 54
Rhodanobacter denitrificans MT42 0.28 LRK55_RS04275 acetyl ornithine aminotransferase family protein 0.41 LRK55_RS09965 3-isopropylmalate dehydrogenase low > 63
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_2221 acetylornithine and succinylornithine transaminases/succinylornithine transaminase family 0.38 B158DRAFT_1322 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 40
Alteromonas macleodii MIT1002 0.28 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase 0.38 MIT1002_00948 3-isopropylmalate dehydrogenase 0.96 35
Phaeobacter inhibens DSM 17395 0.28 PGA1_c24230 acetylornithine aminotransferase ArgD 0.35 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.78 14
Pseudomonas sp. S08-1 0.28 OH686_21290 Succinylornithine transaminase 0.41 OH686_04470 3-isopropylmalate dehydrogenase low > 80
Azospirillum sp. SherDot2 0.28 MPMX19_02177 Succinylornithine transaminase/acetylornithine aminotransferase 0.36 MPMX19_00607 3-isopropylmalate dehydrogenase low > 112
Azospirillum brasilense Sp245 0.28 AZOBR_RS19025 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] (from data) 0.36 AZOBR_RS14130 3-isopropylmalate dehydrogenase
Rhodospirillum rubrum S1H 0.28 Rru_A1147 Acetylornithine and succinylornithine aminotransferase (NCBI) 0.35 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) low > 58
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_17070 astC acetylornithine transaminase 0.42 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase low > 52
Pseudomonas putida KT2440 0.27 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase 0.42 PP_1988 3-isopropylmalate dehydrogenase 0.25 49
Shewanella oneidensis MR-1 0.27 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.40 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.74 17
Shewanella sp. ANA-3 0.27 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.40 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.83 49
Lysobacter sp. OAE881 0.27 ABIE51_RS17420 acetylornithine/succinyldiaminopimelate transaminase 0.44 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.82 35
Shewanella loihica PV-4 0.27 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.39 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.71 27
Pseudomonas stutzeri RCH2 0.27 Psest_2719 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family 0.42 Psest_2589 3-isopropylmalate dehydrogenase 0.44 19
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.1117.1 hypothetical protein 0.41 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 74
Magnetospirillum magneticum AMB-1 0.27 AMB_RS01605 aspartate aminotransferase family protein 0.36 AMB_RS20570 3-isopropylmalate dehydrogenase
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS05420 4-aminobutyrate aminotransferase 0.38 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.30 70
Desulfovibrio vulgaris Miyazaki F 0.26 DvMF_3149 acetylornithine aminotransferase (RefSeq) 0.47 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.96 12
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS26160 4-aminobutyrate aminotransferase 0.37 RR42_RS14385 3-isopropylmalate dehydrogenase low > 128
Dinoroseobacter shibae DFL-12 0.26 Dshi_0798 acetylornithine and succinylornithine aminotransferase (RefSeq) 0.33 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq)
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS05190 4-aminobutyrate--2-oxoglutarate transaminase 0.38 ABZR87_RS14530 3-isopropylmalate dehydrogenase low > 80
Castellaniella sp019104865 MT123 0.24 ABCV34_RS01765 4-aminobutyrate--2-oxoglutarate transaminase 0.38 ABCV34_RS04280 3-isopropylmalate dehydrogenase low > 48
Ralstonia solanacearum GMI1000 0.24 RS_RS00145 4-aminobutyrate--2-oxoglutarate transaminase 0.38 RS_RS09990 3-isopropylmalate dehydrogenase low > 80

Not shown: 0 genomes with orthologs for BT3758 only; 3 genomes with orthologs for BT1857 only