Conservation of cofitness between b2329 and b3771 in Escherichia coli BW25113

100 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2329 aroC chorismate synthase (NCBI) 1.0 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.91 8
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01376 Chorismate synthase 1.00 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia fergusonii Becca 1.00 EFB2_01529 Chorismate synthase 0.99 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS13490 chorismate synthase 0.99 ECOLIN_RS21665 dihydroxy-acid dehydratase — —
Escherichia coli ECRC102 1.00 NIAGMN_20390 aroC chorismate synthase 1.00 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia coli BL21 1.00 ECD_02254 chorismate synthase 1.00 ECD_03649 dihydroxyacid dehydratase low > 60
Escherichia coli ECRC99 1.00 KEDOAH_05580 aroC chorismate synthase 1.00 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC101 1.00 OKFHMN_22615 aroC chorismate synthase 1.00 OKFHMN_14640 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC98 1.00 JDDGAC_26575 aroC chorismate synthase 1.00 JDDGAC_18260 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC101 1.00 MCAODC_13655 aroC chorismate synthase 1.00 MCAODC_05145 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECOR38 1.00 HEPCGN_21820 aroC chorismate synthase 1.00 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 85
Escherichia coli ECOR27 0.99 NOLOHH_14250 aroC chorismate synthase 1.00 NOLOHH_06775 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC62 0.99 BNILDI_13170 aroC chorismate synthase 1.00 BNILDI_04750 ilvD dihydroxy-acid dehydratase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF1950 Chorismate synthase (EC 4.2.3.5) 0.97 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS20435 chorismate synthase 0.96 BWI76_RS00975 dihydroxy-acid dehydratase 0.66 21
Enterobacter sp. TBS_079 0.89 MPMX20_03264 Chorismate synthase 0.97 MPMX20_04499 Dihydroxy-acid dehydratase 0.89 3
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0275 chorismate synthase (EC 4.2.3.5) 0.96 EX28DRAFT_4443 dihydroxy-acid dehydratase — —
Erwinia tracheiphila SCR3 0.87 LU632_RS07775 aroC chorismate synthase 0.86 LU632_RS24400 ilvD dihydroxy-acid dehydratase low > 74
Serratia liquefaciens MT49 0.86 IAI46_18025 chorismate synthase 0.90 IAI46_24345 dihydroxy-acid dehydratase 0.65 42
Dickeya dadantii 3937 0.86 DDA3937_RS14580 chorismate synthase 0.92 DDA3937_RS20155 dihydroxy-acid dehydratase — —
Pectobacterium carotovorum WPP14 0.85 HER17_RS06935 chorismate synthase 0.91 HER17_RS01075 dihydroxy-acid dehydratase 0.90 22
Rahnella sp. WP5 0.85 EX31_RS19685 chorismate synthase 0.87 EX31_RS15005 dihydroxy-acid dehydratase — —
Dickeya dianthicola ME23 0.85 DZA65_RS15465 chorismate synthase 0.91 DZA65_RS21335 dihydroxy-acid dehydratase — —
Dickeya dianthicola 67-19 0.85 HGI48_RS14530 chorismate synthase 0.91 HGI48_RS20295 dihydroxy-acid dehydratase — —
Pantoea sp. MT58 0.83 IAI47_06150 chorismate synthase 0.89 IAI47_01035 dihydroxy-acid dehydratase — —
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_10560 chorismate synthase 0.85 CSW01_00140 dihydroxy-acid dehydratase low > 62
Shewanella amazonensis SB2B 0.77 Sama_2159 chorismate synthase (RefSeq) 0.79 Sama_3279 dihydroxy-acid dehydratase (RefSeq) — —
Shewanella sp. ANA-3 0.75 Shewana3_1469 chorismate synthase (RefSeq) 0.80 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.93 11
Alteromonas macleodii MIT1002 0.75 MIT1002_01229 Chorismate synthase 0.79 MIT1002_04041 Dihydroxy-acid dehydratase — —
Shewanella loihica PV-4 0.74 Shew_2416 chorismate synthase (RefSeq) 0.78 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.73 15
Marinobacter adhaerens HP15 0.72 HP15_1838 chorismate synthase 0.70 HP15_595 dihydroxy-acid dehydratase — —
Pseudomonas putida KT2440 0.69 PP_1830 Chorismate synthase 0.74 PP_5128 Dihydroxy-acid dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_1853 chorismate synthase 0.74 Psyr_0469 dihydroxyacid dehydratase — —
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_1853 chorismate synthase 0.74 Psyr_0469 dihydroxyacid dehydratase — —
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_19540 chorismate synthase 0.75 AO356_13250 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5822 Chorismate synthase (EC 4.2.3.5) 0.75 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_4165 Chorismate synthase (EC 4.2.3.5) 0.75 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.70 30
Pseudomonas stutzeri RCH2 0.68 Psest_1903 chorismate synthase 0.75 Psest_0234 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_02250 chorismate synthase 0.75 AO353_08345 dihydroxy-acid dehydratase 0.32 54
Pseudomonas sp. S08-1 0.67 OH686_00675 chorismate synthase 0.75 OH686_14100 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3780 Chorismate synthase (EC 4.2.3.5) 0.75 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Pseudomonas simiae WCS417 0.67 PS417_19315 chorismate synthase 0.75 PS417_26890 dihydroxy-acid dehydratase — —
Pseudomonas sp. RS175 0.67 PFR28_03126 Chorismate synthase 0.75 PFR28_04278 Dihydroxy-acid dehydratase — —
Paraburkholderia graminis OAS925 0.67 ABIE53_002916 chorismate synthase 0.74 ABIE53_006513 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS21280 chorismate synthase 0.75 PFLU_RS28535 dihydroxy-acid dehydratase — —
Acinetobacter radioresistens SK82 0.67 MPMX26_01340 Chorismate synthase 0.29 MPMX26_03019 Dihydroxy-acid dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS21280 chorismate synthase 0.75 PFLU_RS28535 dihydroxy-acid dehydratase — —
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_04489 chorismate synthase 0.74 H281DRAFT_05312 dihydroxyacid dehydratase — —
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS08040 chorismate synthase 0.28 ABZR86_RS15945 dihydroxy-acid dehydratase 0.88 45
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS13705 chorismate synthase 0.74 BPHYT_RS10100 dihydroxy-acid dehydratase 0.79 42
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_04805 aroC chorismate synthase 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase low > 52
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS05215 chorismate synthase 0.74 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Dechlorosoma suillum PS 0.66 Dsui_3204 chorismate synthase 0.74 Dsui_1122 dihydroxy-acid dehydratase — —
Castellaniella sp019104865 MT123 0.64 ABCV34_RS04300 chorismate synthase 0.72 ABCV34_RS14810 dihydroxy-acid dehydratase — —
Magnetospirillum magneticum AMB-1 0.64 AMB_RS08025 chorismate synthase 0.73 AMB_RS12770 dihydroxy-acid dehydratase — —
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS13790 chorismate synthase 0.75 ABZR87_RS00240 dihydroxy-acid dehydratase low > 80
Acidovorax sp. GW101-3H11 0.64 Ac3H11_2925 Chorismate synthase (EC 4.2.3.5) 0.74 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.70 47
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS06485 chorismate synthase 0.29 RR42_RS16210 dihydroxy-acid dehydratase — —
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS01725 chorismate synthase 0.26 LRK54_RS10320 dihydroxy-acid dehydratase — —
Rhodanobacter denitrificans MT42 0.64 LRK55_RS01505 chorismate synthase 0.26 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Rhodopseudomonas palustris CGA009 0.62 TX73_006170 chorismate synthase 0.74 TX73_007515 dihydroxy-acid dehydratase — —
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.1955.1 Chorismate synthase (EC 4.2.3.5) 0.72 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.75 32
Ralstonia solanacearum UW163 0.62 UW163_RS15160 chorismate synthase 0.29 UW163_RS09135 dihydroxy-acid dehydratase — —
Bosea sp. OAE506 0.62 ABIE41_RS10190 chorismate synthase 0.29 ABIE41_RS15690 dihydroxy-acid dehydratase — —
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS01850 chorismate synthase 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF5239 Chorismate synthase (EC 4.2.3.5) 0.64 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 90
Lysobacter sp. OAE881 0.62 ABIE51_RS08220 chorismate synthase 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase — —
Ralstonia solanacearum PSI07 0.62 RPSI07_RS15640 chorismate synthase 0.29 RPSI07_RS12840 dihydroxy-acid dehydratase — —
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS16525 chorismate synthase 0.74 HSERO_RS02650 dihydroxy-acid dehydratase — —
Azospirillum brasilense Sp245 0.61 AZOBR_RS10730 chorismate synthase 0.74 AZOBR_RS15015 dihydroxy-acid dehydratase — —
Ralstonia solanacearum GMI1000 0.61 RS_RS07885 chorismate synthase 0.28 RS_RS12105 dihydroxy-acid dehydratase — —
Variovorax sp. OAS795 0.60 ABID97_RS19805 chorismate synthase 0.31 ABID97_RS17500 dihydroxy-acid dehydratase — —
Variovorax sp. SCN45 0.60 GFF2627 Chorismate synthase (EC 4.2.3.5) 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Rhodospirillum rubrum S1H 0.59 Rru_A2623 Chorismate synthase (NCBI) 0.71 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) — —
Azospirillum sp. SherDot2 0.58 MPMX19_01810 Chorismate synthase 0.74 MPMX19_05356 Dihydroxy-acid dehydratase — —
Phaeobacter inhibens DSM 17395 0.54 PGA1_c34060 chorismate synthase AroC 0.70 PGA1_c29490 dihydroxy-acid dehydratase LivD — —
Dinoroseobacter shibae DFL-12 0.53 Dshi_3275 Chorismate synthase (RefSeq) 0.31 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.53 DVU0894 aroC chorismate synthase (TIGR) 0.39 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.52 A4249_RS08790 chorismate synthase 0.25 A4249_RS10030 dihydroxy-acid dehydratase — —
Agrobacterium fabrum C58 0.52 Atu0754 chorismate synthase 0.73 Atu1918 dihydroxy-acid dehydratase — —
Rhizobium sp. OAE497 0.52 ABIE40_RS03980 chorismate synthase 0.75 ABIE40_RS08005 dihydroxy-acid dehydratase — —
Caulobacter crescentus NA1000 0.52 CCNA_03256 chorismate synthase 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.70 26
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_03256 chorismate synthase 0.72 CCNA_03139 dihydroxy-acid dehydratase low > 67
Sinorhizobium meliloti 1021 0.52 SMc00007 chorismate synthase 0.75 SMc04045 dihydroxy-acid dehydratase — —
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_2470 chorismate synthase (EC 4.2.3.5) 0.28 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase — —
Desulfovibrio vulgaris Miyazaki F 0.50 DvMF_1408 chorismate synthase (RefSeq) 0.39 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.48 Echvi_1518 chorismate synthase 0.29 Echvi_2055 dihydroxy-acid dehydratase — —
Parabacteroides merdae CL09T00C40 0.47 HMPREF1078_RS16710 chorismate synthase 0.65 HMPREF1078_RS16695 dihydroxy-acid dehydratase 0.85 26
Phocaeicola dorei CL03T12C01 0.46 ABI39_RS12645 chorismate synthase 0.64 ABI39_RS12715 dihydroxy-acid dehydratase 0.86 11
Phocaeicola vulgatus CL09T03C04 0.46 HMPREF1058_RS16730 chorismate synthase 0.64 HMPREF1058_RS16815 dihydroxy-acid dehydratase low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS11645 chorismate synthase 0.27 CA265_RS15795 dihydroxy-acid dehydratase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.46 CA264_19835 chorismate synthase 0.28 CA264_06935 dihydroxy-acid dehydratase — —
Synechococcus elongatus PCC 7942 0.46 Synpcc7942_0212 aroC chorismate synthase 0.75 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase — —
Bacteroides stercoris CC31F 0.45 HMPREF1181_RS08365 chorismate synthase 0.64 HMPREF1181_RS08335 dihydroxy-acid dehydratase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS06995 chorismate synthase 0.27 ABZR88_RS11575 dihydroxy-acid dehydratase — —
Bacteroides thetaiotaomicron VPI-5482 0.44 BT2084 chorismate synthase (NCBI ptt file) 0.63 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.43 BACOVA_03296 chorismate synthase 0.62 BACOVA_03302 dihydroxy-acid dehydratase 0.59 28
Methanococcus maripaludis JJ 0.37 MMJJ_RS07475 chorismate synthase 0.35 MMJJ_RS03675 dihydroxy-acid dehydratase — —
Methanococcus maripaludis S2 0.37 MMP_RS06880 chorismate synthase 0.35 MMP_RS01700 dihydroxy-acid dehydratase — —
Bifidobacterium breve UCC2003 0.26 BBR_RS15080 chorismate synthase 0.56 BBR_RS17635 dihydroxy-acid dehydratase low > 34
Mycobacterium tuberculosis H37Rv 0.24 Rv2540c Probable chorismate synthase AroF (5-enolpyruvylshikimate-3-phosphate phospholyase) 0.31 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad) — —

Not shown: 2 genomes with orthologs for b2329 only; 1 genomes with orthologs for b3771 only