Conservation of cofitness between b2021 and b2025 in Escherichia coli BW25113

100 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2021 hisC histidinol-phosphate aminotransferase (NCBI) 1.0 b2025 hisF imidazole glycerol phosphate synthase subunit HisF (NCBI) 0.95 7
Escherichia coli ECRC102 1.00 NIAGMN_22455 hisC histidinol-phosphate transaminase 1.00 NIAGMN_22435 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECOR27 1.00 NOLOHH_15825 hisC histidinol-phosphate transaminase 0.99 NOLOHH_15805 hisF Imidazole glycerol phosphate synthase subunit HisF low > 57
Escherichia fergusonii Becca 1.00 EFB2_01835 Histidinol-phosphate aminotransferase 1.00 EFB2_01831 Imidazole glycerol phosphate synthase subunit HisF low > 86
Escherichia coli ECRC99 1.00 KEDOAH_03640 hisC histidinol-phosphate transaminase 1.00 KEDOAH_03660 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC101 1.00 MCAODC_20430 hisC histidinol-phosphate transaminase 1.00 MCAODC_20450 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC101 1.00 OKFHMN_24510 hisC histidinol-phosphate transaminase 1.00 OKFHMN_24490 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC98 1.00 JDDGAC_28620 hisC histidinol-phosphate transaminase 1.00 JDDGAC_28600 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01679 Histidinol-phosphate aminotransferase 0.99 OHPLBJKB_01675 Imidazole glycerol phosphate synthase subunit HisF low > 73
Escherichia coli ECRC62 0.99 BNILDI_14735 hisC histidinol-phosphate transaminase 1.00 BNILDI_14715 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli BL21 0.99 ECD_01923 histidinol-phosphate aminotransferase 0.99 ECD_01927 imidazole glycerol phosphate synthase, catalytic subunit with HisH
Escherichia coli ECOR38 0.99 HEPCGN_03215 hisC histidinol-phosphate transaminase 0.99 HEPCGN_03195 hisF Imidazole glycerol phosphate synthase subunit HisF low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS11950 histidinol-phosphate transaminase 1.00 ECOLIN_RS11970 imidazole glycerol phosphate synthase subunit HisF
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF3911 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.95 GFF3907 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_03003 Histidinol-phosphate aminotransferase 0.97 MPMX20_03007 Imidazole glycerol phosphate synthase subunit HisF 0.97 5
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0538 histidinol-phosphate aminotransferase 0.96 EX28DRAFT_0534 imidazoleglycerol phosphate synthase, cyclase subunit 0.91 13
Klebsiella michiganensis M5al 0.87 BWI76_RS18930 histidinol-phosphate transaminase 0.96 BWI76_RS18950 imidazole glycerol phosphate synthase cyclase subunit 0.89 7
Serratia liquefaciens MT49 0.78 IAI46_08205 histidinol-phosphate transaminase 0.95 IAI46_08185 imidazole glycerol phosphate synthase subunit HisF 0.90 7
Erwinia tracheiphila SCR3 0.76 LU632_RS08940 hisC histidinol-phosphate transaminase 0.93 LU632_RS08920 hisF imidazole glycerol phosphate synthase subunit HisF 0.94 6
Rahnella sp. WP5 0.76 EX31_RS11445 histidinol-phosphate transaminase 0.91 EX31_RS11465 imidazole glycerol phosphate synthase subunit HisF 0.96 30
Pantoea sp. MT58 0.76 IAI47_07085 histidinol-phosphate transaminase 0.90 IAI47_07065 imidazole glycerol phosphate synthase subunit HisF 0.99 1
Pectobacterium carotovorum WPP14 0.74 HER17_RS12235 histidinol-phosphate transaminase 0.91 HER17_RS12255 imidazole glycerol phosphate synthase subunit HisF 0.99 4
Dickeya dianthicola ME23 0.73 DZA65_RS10050 histidinol-phosphate transaminase 0.92 DZA65_RS10030 imidazole glycerol phosphate synthase subunit HisF 0.79 9
Dickeya dianthicola 67-19 0.73 HGI48_RS09740 histidinol-phosphate transaminase 0.92 HGI48_RS09720 imidazole glycerol phosphate synthase subunit HisF
Dickeya dadantii 3937 0.73 DDA3937_RS09730 histidinol-phosphate transaminase 0.93 DDA3937_RS09710 imidazole glycerol phosphate synthase subunit HisF 0.97 6
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_05755 histidinol-phosphate transaminase 0.87 CSW01_05775 imidazole glycerol phosphate synthase cyclase subunit low > 62
Alteromonas macleodii MIT1002 0.49 MIT1002_02634 Histidinol-phosphate aminotransferase 0.76 MIT1002_02638 Imidazole glycerol phosphate synthase subunit HisF 0.98 15
Shewanella oneidensis MR-1 0.42 SO2072 hisC histidinol-phosphate aminotransferase (NCBI ptt file) 0.75 SO2068 hisF hisF protein (cyclase) (NCBI ptt file) 0.98 6
Shewanella sp. ANA-3 0.42 Shewana3_1852 histidinol phosphate aminotransferase (RefSeq) 0.75 Shewana3_1848 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.95 17
Shewanella loihica PV-4 0.40 Shew_2199 histidinol-phosphate aminotransferase (RefSeq) 0.75 Shew_2203 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.95 27
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_04955 hisC histidinol-phosphate transaminase 0.64 OKGIIK_04975 hisF imidazole glycerol phosphate synthase subunit HisF low > 52
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.2947.1 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.63 Xcc-8004.2943.1 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.90 10
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS01600 histidinol-phosphate transaminase 0.65 LRK54_RS01580 imidazole glycerol phosphate synthase subunit HisF 0.78 6
Rhodanobacter denitrificans MT42 0.37 LRK55_RS01380 histidinol-phosphate transaminase 0.64 LRK55_RS01360 imidazole glycerol phosphate synthase subunit HisF 0.68 18
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_05035 histidinol-phosphate transaminase 0.47 CA264_05110 imidazole glycerol phosphate synthase cyclase subunit 0.41 5
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS06725 histidinol-phosphate transaminase 0.63 ABZR86_RS06705 imidazole glycerol phosphate synthase subunit HisF 0.94 35
Mucilaginibacter yixingensis YX-36 DSM 26809 0.34 ABZR88_RS06875 histidinol-phosphate transaminase 0.43 ABZR88_RS06855 imidazole glycerol phosphate synthase subunit HisF 0.74 5
Lysobacter sp. OAE881 0.34 ABIE51_RS13320 histidinol-phosphate transaminase 0.65 ABIE51_RS13300 imidazole glycerol phosphate synthase subunit HisF 0.93 47
Shewanella amazonensis SB2B 0.33 Sama_1943 histidinol-phosphate aminotransferase (RefSeq) 0.77 Sama_1947 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.99 3
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_2458 histidinol-phosphate aminotransferase 0.41 Echvi_2516 imidazoleglycerol phosphate synthase, cyclase subunit 0.97 2
Parabacteroides merdae CL09T00C40 0.32 HMPREF1078_RS02445 histidinol-phosphate transaminase 0.43 HMPREF1078_RS13565 imidazole glycerol phosphate synthase subunit HisF 0.98 12
Bacteroides stercoris CC31F 0.29 HMPREF1181_RS04855 histidinol-phosphate transaminase 0.42 HMPREF1181_RS11070 imidazole glycerol phosphate synthase subunit HisF 0.97 6
Bacteroides ovatus ATCC 8483 0.29 BACOVA_01233 histidinol-phosphate transaminase 0.44 BACOVA_00219 imidazoleglycerol phosphate synthase, cyclase subunit 0.98 5
Phocaeicola vulgatus CL09T03C04 0.28 HMPREF1058_RS15880 histidinol-phosphate transaminase 0.46 HMPREF1058_RS06175 imidazole glycerol phosphate synthase subunit HisF 0.94 15
Phocaeicola dorei CL03T12C01 0.28 ABI39_RS11840 histidinol-phosphate transaminase 0.46 ABI39_RS19930 imidazole glycerol phosphate synthase subunit HisF 0.74 29
Bacteroides thetaiotaomicron VPI-5482 0.27 BT0202 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.44 BT1378 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) 0.88 30
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_2325 histidinol-phosphate aminotransferase 0.39 B158DRAFT_2291 imidazoleglycerol phosphate synthase, cyclase subunit low > 40
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS27860 histidinol-phosphate transaminase 0.40 QEN71_RS27835 imidazole glycerol phosphate synthase subunit HisF 0.65 8
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS02495 histidinol-phosphate transaminase 0.42 ABZR87_RS02470 imidazole glycerol phosphate synthase subunit HisF
Paraburkholderia graminis OAS925 0.19 ABIE53_003700 histidinol-phosphate aminotransferase 0.41 ABIE53_003695 cyclase
Ralstonia solanacearum GMI1000 0.19 RS_RS14785 histidinol-phosphate aminotransferase 1 0.42 RS_RS14760 imidazole glycerol phosphate synthase subunit HisF
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF1493 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.38 GFF1309 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_05654 histidinol phosphate aminotransferase apoenzyme 0.41 H281DRAFT_05659 imidazole glycerol phosphate synthase subunit hisF
Methanococcus maripaludis S2 0.19 MMP_RS06260 histidinol-phosphate transaminase 0.38 MMP_RS08865 imidazole glycerol phosphate synthase subunit HisF
Ralstonia solanacearum PSI07 0.19 RPSI07_RS10395 histidinol-phosphate transaminase 0.42 RPSI07_RS10420 imidazole glycerol phosphate synthase subunit HisF
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU1029 hisC histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.37 DVU0286 hisF imidazoleglycerol phosphate synthase, cyclase subunit (TIGR) 0.89 4
Magnetospirillum magneticum AMB-1 0.19 AMB_RS00655 histidinol-phosphate aminotransferase family protein 0.37 AMB_RS22925 imidazole glycerol phosphate synthase cyclase subunit
Methanococcus maripaludis JJ 0.19 MMJJ_RS08090 histidinol-phosphate transaminase 0.38 MMJJ_RS05490 imidazole glycerol phosphate synthase subunit HisF
Variovorax sp. SCN45 0.18 GFF5348 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.39 GFF5357 Imidazole glycerol phosphate synthase cyclase subunit
Ralstonia solanacearum UW163 0.18 UW163_RS06775 histidinol-phosphate transaminase 0.43 UW163_RS06800 imidazole glycerol phosphate synthase subunit HisF
Mycobacterium tuberculosis H37Rv 0.18 Rv1600 Probable histidinol-phosphate aminotransferase HisC1 0.37 Rv1605 Probable cyclase HisF
Pseudomonas stutzeri RCH2 0.18 Psest_1985 histidinol-phosphate aminotransferase 0.42 Psest_0156 imidazoleglycerol phosphate synthase, cyclase subunit
Ralstonia solanacearum IBSBF1503 0.18 RALBFv3_RS06840 histidinol-phosphate transaminase 0.43 RALBFv3_RS06815 imidazole glycerol phosphate synthase subunit HisF
Acidovorax sp. GW101-3H11 0.18 Ac3H11_4729 histidinol-phosphate transaminase (EC 2.6.1.9) (from data) 0.34 Ac3H11_4733 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_03460 aspartate aminotransferase 0.40 AO356_09795 imidazole glycerol phosphate synthase subunit HisF low > 104
Marinobacter adhaerens HP15 0.18 HP15_2427 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.39 HP15_3009 protein containing histidine biosynthesis, HisF domain
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS18910 histidinol-phosphate aminotransferase 0.42 RR42_RS18885 imidazole glycerol phosphate synthase
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_02065 aspartate aminotransferase 0.40 AO353_12090 imidazole glycerol phosphate synthase subunit HisF 0.46 47
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_2519 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) 0.40 Pf6N2E2_3838 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS02830 aspartate aminotransferase 0.41 BPHYT_RS17680 imidazole glycerol phosphate synthase subunit HisF low > 109
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_0908 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.36 DvMF_2304 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.97 5
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_349 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) 0.40 Pf1N1B4_1623 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Castellaniella sp019104865 MT123 0.18 ABCV34_RS02645 histidinol-phosphate transaminase 0.37 ABCV34_RS11250 imidazole glycerol phosphate synthase subunit HisF 0.58 21
Acinetobacter radioresistens SK82 0.17 MPMX26_02586 Histidinol-phosphate aminotransferase 0.40 MPMX26_02854 Imidazole glycerol phosphate synthase subunit HisF 0.99 5
Pseudomonas simiae WCS417 0.17 PS417_08130 aspartate aminotransferase 0.40 PS417_01580 imidazole glycerol phosphate synthase 0.22 14
Pseudomonas sp. RS175 0.17 PFR28_00908 Histidinol-phosphate aminotransferase 0.40 PFR28_04933 Imidazole glycerol phosphate synthase subunit HisF low > 88
Pseudomonas sp. S08-1 0.17 OH686_20875 histidinol-phosphate transaminase 0.42 OH686_14595 Imidazole glycerol phosphate synthase cyclase subunit low > 80
Variovorax sp. OAS795 0.17 ABID97_RS23145 histidinol-phosphate transaminase 0.41 ABID97_RS23105 imidazole glycerol phosphate synthase subunit HisF
Pseudomonas fluorescens GW456-L13 0.17 PfGW456L13_2177 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) 0.40 PfGW456L13_358 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.48 5
Pseudomonas fluorescens SBW25 0.17 PFLU_RS08100 histidinol-phosphate transaminase 0.40 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF low > 109
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS08100 histidinol-phosphate transaminase 0.40 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF low > 109
Pseudomonas putida KT2440 0.17 PP_0967 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.41 PP_0293 Imidazole glycerol phosphate synthase subunit HisF 0.86 23
Azospirillum brasilense Sp245 0.16 AZOBR_RS20485 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) 0.40 AZOBR_RS01685 imidazole glycerol phosphate synthase 0.96 5
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS23520 histidinol-phosphate aminotransferase 0.39 HSERO_RS20315 imidazole glycerol phosphate synthase low > 78
Rhodospirillum rubrum S1H 0.16 Rru_A3264 Histidinol-phosphate aminotransferase (NCBI) 0.36 Rru_A3594 Histidine biosynthesis protein HisF (NCBI) 0.85 10
Azospirillum sp. SherDot2 0.16 MPMX19_04389 Histidinol-phosphate aminotransferase 0.40 MPMX19_02542 Imidazole glycerol phosphate synthase subunit HisF
Synechococcus elongatus PCC 7942 0.16 Synpcc7942_1030 hisC histidinol-phosphate aminotransferase 0.37 Synpcc7942_2087 hisF imidazole glycerol phosphate synthase subunit HisF
Caulobacter crescentus NA1000 Δfur 0.16 CCNA_02617 histidinol-phosphate aminotransferase 0.41 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit low > 67
Caulobacter crescentus NA1000 0.16 CCNA_02617 histidinol-phosphate aminotransferase 0.41 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit low > 66
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_4132 histidinol phosphate aminotransferase apoenzyme 0.40 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF
Dechlorosoma suillum PS 0.15 Dsui_1414 histidinol-phosphate aminotransferase 0.38 Dsui_1418 imidazoleglycerol phosphate synthase, cyclase subunit
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_4132 histidinol phosphate aminotransferase apoenzyme 0.40 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF 0.82 25
Brevundimonas sp. GW460-12-10-14-LB2 0.15 A4249_RS11450 histidinol-phosphate transaminase 0.57 A4249_RS10715 imidazole glycerol phosphate synthase subunit HisF 0.98 12
Phaeobacter inhibens DSM 17395 0.15 PGA1_c25240 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) 0.34 PGA1_c09240 imidazole glycerol phosphate synthase subunit HisF
Bifidobacterium breve UCC2003 0.14 BBR_RS17050 histidinol-phosphate transaminase 0.40 BBR_RS16095 imidazole glycerol phosphate synthase subunit HisF 0.74 5
Dinoroseobacter shibae DFL-12 0.14 Dshi_2946 histidinol-phosphate aminotransferase (RefSeq) 0.37 Dshi_2576 imidazoleglycerol phosphate synthase, cyclase subunit (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.14 Ga0059261_2299 histidinol-phosphate aminotransferase 0.35 Ga0059261_1048 imidazoleglycerol phosphate synthase, cyclase subunit 0.99 1
Sinorhizobium meliloti 1021 0.13 SMc00710 histidinol-phosphate aminotransferase 0.36 SMc02569 imidazole glycerol phosphate synthase subunit HisF low > 103
Rhizobium sp. OAE497 0.12 ABIE40_RS17595 histidinol-phosphate transaminase 0.36 ABIE40_RS19440 imidazole glycerol phosphate synthase subunit HisF 0.98 7
Rhodopseudomonas palustris CGA009 0.12 TX73_023035 histidinol-phosphate transaminase 0.33 TX73_001625 imidazole glycerol phosphate synthase subunit HisF
Agrobacterium fabrum C58 0.11 Atu2810 cobalamin biosynthetic protein 0.37 Atu0039 imidazoleglycerol-phosphate synthase cyclase low > 89

Not shown: 1 genomes with orthologs for b2021 only; 1 genomes with orthologs for b2025 only