Homologs of PfGW456L13_990 from Pseudomonas fluorescens GW456-L13

Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)
SEED: Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase D

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Pseudomonas fluorescens GW456-L13	PfGW456L13_990		Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)	sig.	100	100
o	Pseudomonas fluorescens FW300-N2E3	AO353_08265		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	strong	91	98
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_2320		Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)	no data	89	98
o	Pseudomonas sp. RS175	PFR28_04262		Ribosomal RNA small subunit methyltransferase D	strong	87	100
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4579		Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)	strong	85	100
o	Pseudomonas fluorescens FW300-N2C3	AO356_13320		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	sig.	85	100
o	Pseudomonas simiae WCS417	PS417_26825		16S rRNA methyltransferase	no data	85	98
o	Pseudomonas fluorescens SBW25	PFLU_RS28470		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	insig.	84	99
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS28470		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	strong	84	99
o	Pseudomonas stutzeri RCH2	Psest_0255		RNA methyltransferase, RsmD family	no data	67	97
o	Pseudomonas syringae pv. syringae B728a	Psyr_4754		16S rRNA m(2)G-966 methyltransferase	insig.	68	94
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_4754		16S rRNA m(2)G-966 methyltransferase	insig.	68	94
o	Pseudomonas sp. S08-1	OH686_14220		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	cofit	71	95
o	Pseudomonas putida KT2440	PP_5114		putative adenine methyltransferase	strong	61	97
o	Pectobacterium carotovorum WPP14	HER17_RS00465		16S rRNA (guanine(966)-N(2))-methyltransferase	insig.	52	93
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_00238		Ribosomal RNA small subunit methyltransferase D	cofit	50	96
o	Escherichia coli BL21	ECD_03314		16S rRNA m(2)G966 methyltransferase, SAM-dependent	cofit	50	96
o	Dickeya dianthicola 67-19	HGI48_RS20760		16S rRNA (guanine(966)-N(2))-methyltransferase	cofit	53	90
o	Escherichia fergusonii Becca	EFB2_00351		Ribosomal RNA small subunit methyltransferase D	cofit	50	96
o	Dickeya dadantii 3937	DDA3937_RS00630		16S rRNA (guanine(966)-N(2))-methyltransferase	sig.	52	90
o	Escherichia coli ECOR27	NOLOHH_08500	rsmD	16S rRNA (guanine(966)-N(2))-methyltransferase	strong	50	96
o	Escherichia coli ECOR38	HEPCGN_15525	rsmD	16S rRNA (guanine(966)-N(2))-methyltransferase	strong	50	96
o	Escherichia coli ECRC62	BNILDI_03015	rsmD	16S rRNA (guanine(966)-N(2))-methyltransferase	cofit	50	96
o	Escherichia coli Nissle 1917	ECOLIN_RS19815		16S rRNA (guanine(966)-N(2))-methyltransferase	sig.	50	96
o	Escherichia coli BW25113	b3465	yhhF	predicted methyltransferase (NCBI)	strong	50	96
o	Rahnella sp. WP5	EX31_RS14835		16S rRNA (guanine(966)-N(2))-methyltransferase	insig.	52	89
o	Dickeya dianthicola ME23	DZA65_RS21770		16S rRNA (guanine(966)-N(2))-methyltransferase	insig.	52	90
o	Escherichia coli ECRC100	OKFHMN_16695	rsmD	16S rRNA (guanine(966)-N(2))-methyltransferase	cofit	49	96
o	Escherichia coli ECRC101	MCAODC_07225	rsmD	16S rRNA (guanine(966)-N(2))-methyltransferase	sig.	49	96
o	Escherichia coli ECRC102	NIAGMN_14465	rsmD	16S rRNA (guanine(966)-N(2))-methyltransferase	insig.	49	96
o	Escherichia coli ECRC98	JDDGAC_20325	rsmD	16S rRNA (guanine(966)-N(2))-methyltransferase	cofit	49	96
o	Escherichia coli ECRC99	KEDOAH_11445	rsmD	16S rRNA (guanine(966)-N(2))-methyltransferase	no data	49	96
o	Marinobacter adhaerens HP15	HP15_3491		conserved hypothetical protein	sig.	48	90
o	Serratia liquefaciens MT49	IAI46_00920		16S rRNA (guanine(966)-N(2))-methyltransferase	insig.	49	97
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF540		16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	insig.	50	96
o	Erwinia tracheiphila SCR3	LU632_RS19285	rsmD	16S rRNA (guanine(966)-N(2))-methyltransferase	insig.	50	92
o	Shewanella sp. ANA-3	Shewana3_3973		putative methyltransferase (RefSeq)	strong	44	97
o	Enterobacter sp. TBS_079	MPMX20_04342		Ribosomal RNA small subunit methyltransferase D	sig.	50	96
o	Enterobacter asburiae PDN3	EX28DRAFT_4299		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	insig.	49	96
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS19990		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	strong	50	90
o	Rhodanobacter sp. FW510-T8	OKGIIK_02580	rsmD	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	cofit	50	90
o	Klebsiella michiganensis M5al	BWI76_RS26405		16S rRNA (guanine(966)-N(2))-methyltransferase	sig.	49	96
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS13340		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	strong	49	89
o	Shewanella amazonensis SB2B	Sama_3469		hypothetical protein (RefSeq)	strong	48	90
o	Shewanella loihica PV-4	Shew_3607		putative methyltransferase (RefSeq)	strong	48	88
o	Pantoea sp. MT58	IAI47_01535		16S rRNA (guanine(966)-N(2))-methyltransferase	sig.	52	92
o	Rhodanobacter denitrificans MT42	LRK55_RS13080		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	strong	49	89
o	Shewanella oneidensis MR-1	SO4587		conserved hypothetical protein TIGR00095 (NCBI ptt file)	strong	45	90
o	Vibrio cholerae E7946 ATCC 55056	CSW01_00740		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	insig.	48	89
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.2153.1		16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	sig.	47	97
o	Kangiella aquimarina DSM 16071	B158DRAFT_0443		16S rRNA m(2)G-966 methyltransferase (EC 2.1.1.52)	sig.	39	97
o	Dechlorosoma suillum PS	Dsui_1027		RNA methyltransferase, RsmD family	insig.	47	89
o	Alteromonas macleodii MIT1002	MIT1002_03683		Ribosomal RNA small subunit methyltransferase D	sig.	42	90
o	Acinetobacter radioresistens SK82	MPMX26_02312		Ribosomal RNA small subunit methyltransferase D	cofit	43	91
o	Lysobacter sp. OAE881	ABIE51_RS15125		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	insig.	43	90
o	Castellaniella sp019104865 MT123	ABCV34_RS10145		RsmD family RNA methyltransferase	cofit	41	90
o	Burkholderia phytofirmans PsJN	BPHYT_RS02815		methyltransferase	sig.	40	89
o	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_01968		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	sig.	40	91
o	Paraburkholderia sabiae LMG 24235	QEN71_RS01665		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	strong	38	99
o	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF817		Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)	cofit	39	88
o	Paraburkholderia graminis OAS925	ABIE53_000701		16S rRNA (guanine966-N2)-methyltransferase	sig.	38	98
o	Herbaspirillum seropedicae SmR1	HSERO_RS20695		methyltransferase	sig.	39	94
o	Acidovorax sp. GW101-3H11	Ac3H11_3873		Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)	no data	39	89
o	Ralstonia solanacearum IBSBF1503	RALBFv3_RS11070		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	insig.	39	89
o	Ralstonia solanacearum UW163	UW163_RS02510		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	no data	39	89
o	Ralstonia solanacearum PSI07	RPSI07_RS22230		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	insig.	37	95
o	Ralstonia solanacearum GMI1000	RS_RS01920		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	insig.	36	96
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS06960		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	sig.	36	89
	Variovorax sp. SCN45	GFF2320		16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	insig.	45	63
	Variovorax sp. OAS795	ABID97_RS23860		RsmD family RNA methyltransferase	strong	44	62
o	Cupriavidus basilensis FW507-4G11	RR42_RS01990		methyltransferase	insig.	38	86
o	Phaeobacter inhibens DSM 17395	PGA1_c29260		ribosomal RNA small subunit methyltransferase D	sig.	39	88
	Fusobacterium nucleatum SB010	HUW76_03595		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	strong	33	72
	Azospirillum brasilense Sp245	AZOBR_RS04500		methyltransferase	no data	40	72
o	Rhodospirillum rubrum S1H	Rru_A0653		hypothetical protein (NCBI)	no data	34	89
	Desulfovibrio vulgaris Miyazaki F	DvMF_0172		methyltransferase (RefSeq)	sig.	37	74
	Caulobacter crescentus NA1000	CCNA_00227		methyltransferase	strong	34	78
	Caulobacter crescentus NA1000 Δfur	CCNA_00227		methyltransferase	insig.	34	78
	Azospirillum sp. SherDot2	MPMX19_01626		Ribosomal RNA small subunit methyltransferase D	no data	39	72
o	Bosea sp. OAE506	ABIE41_RS23215		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	insig.	34	88
	Dinoroseobacter shibae DFL-12	Dshi_0115		putative methyltransferase (RefSeq)	strong	40	75
	Desulfovibrio vulgaris Hildenborough JW710	DVU1531		methyltransferase, putative (TIGR)	sig.	34	74
o	Synechococcus elongatus PCC 7942	Synpcc7942_1480		hypothetical protein	strong	33	82
o	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS04215		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	insig.	32	86
o	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS07045		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	sig.	32	88
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12725		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	strong	34	74
o	Mycobacterium tuberculosis H37Rv	Rv2966c		Possible methyltransferase (methylase)	no data	32	88
o	Parabacteroides merdae CL09T00C40	HMPREF1078_RS04100		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	sig.	28	90
	Rhodopseudomonas palustris CGA009	TX73_005985		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	insig.	36	72
	Agrobacterium fabrum C58	Atu0690		hypothetical protein	sig.	34	72
	Sinorhizobium meliloti 1021	SMc00902		hypothetical protein	no data	34	67
	Rhizobium sp. OAE497	ABIE40_RS03765		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	sig.	32	74
o	Magnetospirillum magneticum AMB-1	AMB_RS20860		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	cofit	31	88
	Sphingomonas koreensis DSMZ 15582	Ga0059261_0246		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	insig.	34	73
o	Bacteroides stercoris CC31F	HMPREF1181_RS09245		RsmD family RNA methyltransferase	insig.	28	87
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS14025		RsmD family RNA methyltransferase	sig.	28	72
o	Phocaeicola dorei CL03T12C01	ABI39_RS09675		RsmD family RNA methyltransferase	insig.	25	89
o	Bacteroides thetaiotaomicron VPI-5482	BT3979		putative methyltransferase (NCBI ptt file)	sig.	25	87
	Bifidobacterium breve UCC2003	BBR_RS19290		16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	strong	33	59
o	Bacteroides ovatus ATCC 8483	BACOVA_04638		putative RNA methyltransferase, RsmD family	insig.	23	88