Homologs of MIT1002_03370 from Alteromonas macleodii MIT1002

tRNA (uracil(54)-C(5))-methyltransferase
SEED: tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35)
KEGG: tRNA (uracil-5-)-methyltransferase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Alteromonas macleodii MIT1002 MIT1002_03370 tRNA (uracil(54)-C(5))-methyltransferase insig. 100 100
o Erwinia amylovora T8 OLJFJH_06160 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 60 98
o Pantoea sp. MT58 IAI47_00950 tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 60 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18390 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 60 98
o Shewanella amazonensis SB2B Sama_0193 tRNA (uracil-5-)-methyltransferase (RefSeq) sig. 60 99
o Pectobacterium carotovorum WPP14 HER17_RS00975 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 59 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_00785 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 59 98
o Klebsiella pneumoniae MKP103 KDGMDA_09400 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 59 98
o Dickeya dadantii 3937 DDA3937_RS00990 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 58 98
o Klebsiella michiganensis M5al BWI76_RS00885 tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 58 98
o Shewanella loihica PV-4 Shew_0138 tRNA (uracil-5-)-methyltransferase (RefSeq) insig. 57 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_13145 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 59 98
o Erwinia tracheiphila SCR3 LU632_RS19550 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 59 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2351 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) cofit 59 98
o Escherichia coli ECRC100 OKFHMN_13535 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 59 98
o Escherichia coli ECRC102 NIAGMN_11285 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 59 98
o Escherichia coli ECRC98 JDDGAC_17160 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 59 98
o Escherichia coli ECRC99 KEDOAH_14625 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA no data 59 98
o Escherichia coli BL21 ECD_03850 tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase cofit 59 98
o Escherichia coli ECOR27 NOLOHH_05680 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 59 98
o Escherichia coli ECRC62 BNILDI_05845 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 59 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04085 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 59 98
o Escherichia coli BW25113 b3965 trmA tRNA (uracil-5-)-methyltransferase (NCBI) sig. 59 98
o Escherichia fergusonii Becca EFB2_04645 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 58 98
o Escherichia coli Nissle 1917 ECOLIN_RS22900 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 58 98
o Serratia liquefaciens MT49 IAI46_24455 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 57 98
o Escherichia coli ECOR38 HEPCGN_12190 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 58 98
o Escherichia coli ECRC101 MCAODC_04035 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 58 98
o Enterobacter sp. TBS_079 MPMX20_04515 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 58 98
o Dickeya dianthicola 67-19 HGI48_RS20385 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 57 98
o Dickeya dianthicola ME23 DZA65_RS21430 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 57 98
o Enterobacter asburiae PDN3 EX28DRAFT_4428 tRNA (uracil(54)-C(5))-methyltransferase insig. 57 98
o Rahnella sp. WP5 EX31_RS14140 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 57 98
o Shewanella sp. ANA-3 Shewana3_0179 tRNA (uracil-5-)-methyltransferase (RefSeq) insig. 56 100
o Shewanella oneidensis MR-1 SO0206 trmA tRNA (uracil-5-)-methyltransferase (NCBI ptt file) sig. 56 99
o Acinetobacter baumannii LAC-4 RR41_RS11900 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 51 97
o Acinetobacter radioresistens SK82 MPMX26_01714 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 51 99
o Pseudomonas segetis P6 ACVTMO_RS19815 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 51 98
o Pseudomonas orientalis W4I3 QF045_RS26680 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 50 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05030 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 49 98
o Pseudomonas simiae WCS417 PS417_24385 tRNA (uracil-5-)-methyltransferase sig. 49 98
o Pseudomonas fluorescens FW300-N2E3 AO353_13905 tRNA (uracil-5-)-methyltransferase sig. 48 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2754 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) insig. 48 99
o Pseudomonas sp. SVBP6 COO64_RS02860 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 48 98
o Pseudomonas fluorescens SBW25 PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 48 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 48 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1430 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) sig. 48 99
o Pseudomonas sp. DMC3 GFF3938 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 48 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5063 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) strong 48 99
o Pseudomonas sp. BP01 JOY50_RS27500 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 47 100
o Pseudomonas putida KT2440 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase strong 47 100
o Pseudomonas fluorescens FW300-N2C3 AO356_15600 tRNA (uracil-5-)-methyltransferase insig. 47 99
o Pseudomonas sp. RS175 PFR28_03809 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 47 99
o Pseudomonas stutzeri RCH2 Psest_3451 tRNA (uracil-5-)-methyltransferase sig. 47 98
o Dechlorosoma suillum PS Dsui_2239 tRNA (uracil-5-)-methyltransferase insig. 45 98
o Pseudomonas sp. S08-1 OH686_16060 tRNA (uracil(54)-C(5))-methyltransferase cofit 47 98
o Pseudomonas aeruginosa MRSN321 DY961_RS09335 trmA;go_function=S-adenosylmethionine-dependent tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 48 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS52695 trmA;go_function=tRNA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 48 98
o Pseudomonas syringae pv. syringae B728a Psyr_4287 tRNA (uracil-5-)-methyltransferase insig. 48 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4287 tRNA (uracil-5-)-methyltransferase insig. 48 98
o Pseudomonas aeruginosa PA14 IKLFDK_30015 tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 48 98
  Kangiella aquimarina DSM 16071 B158DRAFT_2275 23S rRNA (uracil-5-)-methyltransferase RumA insig. 34 49
  Pseudomonas syringae pv. syringae B728a Psyr_3696 23S rRNA m(5)U-1939 methyltransferase insig. 35 49
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3696 23S rRNA m(5)U-1939 methyltransferase insig. 35 49
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17370 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 29 97
  Erwinia tracheiphila SCR3 LU632_RS06345 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 29 97
  Pseudomonas aeruginosa MRSN321 DY961_RS07780 rlmD;go_function=RNA 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD sig. 34 51
  Pseudomonas aeruginosa PA14 IKLFDK_04195 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD sig. 34 51
  Pseudomonas aeruginosa PUPa3 DQ20_RS45015 rlmD;go_function=RNA 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD strong 34 51
  Pseudomonas sp. SVBP6 COO64_RS07330 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 35 49
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 34 49
  Pseudomonas sp. DMC3 GFF4819 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 34 49
  Pseudomonas fluorescens FW300-N2C3 AO356_19055 23S rRNA methyltransferase insig. 34 49
  Escherichia coli BL21 ECD_02630 23S rRNA m(5)U1939 methyltransferase, SAM-dependent insig. 36 52
  Escherichia coli ECOR38 HEPCGN_19495 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 36 52
  Escherichia coli ECRC62 BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 36 52
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00946 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 36 52
  Escherichia coli BW25113 b2785 rumA 23S rRNA (uracil-5-)-methyltransferase (NCBI) insig. 36 52
  Lysobacter sp. OAE881 ABIE51_RS13830 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 32 53
  Marinobacter adhaerens HP15 HP15_790 23S rRNA 5-methyluridine methyltransferase insig. 32 49
  Escherichia coli ECOR27 NOLOHH_12120 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 36 52
  Escherichia coli ECRC100 OKFHMN_20245 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 36 52
  Escherichia coli ECRC101 MCAODC_10770 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 36 52
  Escherichia coli ECRC102 NIAGMN_18015 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 36 52
  Escherichia coli ECRC98 JDDGAC_23910 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 36 52
  Escherichia coli ECRC99 KEDOAH_07885 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no data 36 52
  Escherichia coli Nissle 1917 ECOLIN_RS15520 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 36 52
  Escherichia fergusonii Becca EFB2_01132 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 36 52
  Pseudomonas simiae WCS417 PS417_20155 23S rRNA methyltransferase insig. 34 49
  Shewanella oneidensis MR-1 SO3456 RNA methyltransferase, TrmA family (NCBI ptt file) strong 36 48
  Pseudomonas stutzeri RCH2 Psest_1639 23S rRNA (uracil-5-)-methyltransferase RumA insig. 34 49
  Pantoea sp. MT58 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 27 96
  Pseudomonas fluorescens SBW25 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD strong 34 49
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD sig. 34 49
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 strong 34 49
  Pseudomonas segetis P6 ACVTMO_RS08190 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 33 49
  Erwinia amylovora T8 OLJFJH_09240 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 36 49
  Enterobacter asburiae PDN3 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA insig. 35 52
  Vibrio cholerae E7946 ATCC 55056 CSW01_12410 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 35 50
  Shewanella loihica PV-4 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) cofit 28 88