Homologs of MIT1002_02719 from Alteromonas macleodii MIT1002

Sigma-24
SEED: RNA polymerase sigma factor RpoE
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Alteromonas macleodii MIT1002 MIT1002_02719 Sigma-24 no data 100 100
o Shewanella sp. ANA-3 Shewana3_3032 RNA polymerase sigma factor RpoE (RefSeq) no data 74 99
o Shewanella oneidensis MR-1 SO1342 rpoE RNA polymerase sigma-24 factor (NCBI ptt file) no data 74 99
o Shewanella loihica PV-4 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) cofit 73 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_12485 RNA polymerase sigma factor RpoE no data 72 99
o Escherichia coli BL21 ECD_02467 RNA polymerase sigma E factor no data 73 99
o Escherichia fergusonii Becca EFB2_01323 ECF RNA polymerase sigma-E factor no data 73 99
o Escherichia coli ECOR27 NOLOHH_13050 rpoE RNA polymerase sigma factor RpoE no data 73 99
o Escherichia coli ECOR38 HEPCGN_20520 rpoE RNA polymerase sigma factor RpoE no data 73 99
o Escherichia coli ECRC100 OKFHMN_21375 rpoE RNA polymerase sigma factor RpoE no data 73 99
o Escherichia coli ECRC101 MCAODC_11905 rpoE RNA polymerase sigma factor RpoE no data 73 99
o Escherichia coli ECRC102 NIAGMN_19145 rpoE RNA polymerase sigma factor RpoE no data 73 99
o Escherichia coli ECRC62 BNILDI_11850 rpoE RNA polymerase sigma factor RpoE no data 73 99
o Escherichia coli ECRC98 JDDGAC_25040 rpoE RNA polymerase sigma factor RpoE no data 73 99
o Escherichia coli ECRC99 KEDOAH_06845 rpoE RNA polymerase sigma factor RpoE no data 73 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01134 ECF RNA polymerase sigma-E factor no data 73 99
o Escherichia coli Nissle 1917 ECOLIN_RS14560 RNA polymerase sigma factor RpoE no data 73 99
o Escherichia coli BW25113 b2573 rpoE RNA polymerase, sigma 24 (sigma E) factor (NCBI) no data 73 99
o Serratia liquefaciens MT49 IAI46_19585 RNA polymerase sigma factor RpoE no data 72 99
o Klebsiella pneumoniae MKP103 KDGMDA_28480 RNA polymerase sigma factor RpoE no data 72 99
o Klebsiella pneumoniae MRSN742743 GJGHJB_01209 rpoE RNA polymerase sigma factor RpoE no data 72 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2107 RNA polymerase sigma factor RpoE no data 73 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS05140 rpoE RNA polymerase sigma factor RpoE no data 72 99
o Enterobacter asburiae PDN3 EX28DRAFT_0072 RNA polymerase sigma factor RpoE no data 72 99
o Enterobacter sp. TBS_079 MPMX20_03444 ECF RNA polymerase sigma-E factor no data 72 99
o Klebsiella michiganensis M5al BWI76_RS21355 RNA polymerase sigma factor RpoE no data 71 99
o Erwinia amylovora T8 OLJFJH_10215 RNA polymerase sigma factor RpoE strong 71 99
o Rahnella sp. WP5 EX31_RS21800 RNA polymerase sigma factor RpoE no data 71 99
o Shewanella amazonensis SB2B Sama_0874 RNA polymerase sigma factor RpoE (RefSeq) strong 72 100
o Pantoea sp. MT58 IAI47_04850 RNA polymerase sigma factor RpoE no data 71 99
o Dickeya dadantii 3937 DDA3937_RS15765 RNA polymerase sigma factor RpoE strong 71 99
o Dickeya dianthicola 67-19 HGI48_RS15850 RNA polymerase sigma factor RpoE cofit 71 99
o Dickeya dianthicola ME23 DZA65_RS16930 RNA polymerase sigma factor RpoE strong 71 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_01235 rpoE RNA polymerase sigma factor RpoE strong 70 99
o Pectobacterium carotovorum WPP14 HER17_RS05780 RNA polymerase sigma factor RpoE no data 70 99
o Erwinia tracheiphila SCR3 LU632_RS15425 rpoE RNA polymerase sigma factor RpoE strong 70 99
o Pseudomonas segetis P6 ACVTMO_RS06940 rpoE RNA polymerase sigma factor RpoE strong 68 99
o Kangiella aquimarina DSM 16071 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE strong 66 100
o Pseudomonas sp. BP01 JOY50_RS14665 rpoE RNA polymerase sigma factor RpoE insig. 67 99
o Pseudomonas protegens RBAN4 FABNJH_07555 algU alginate biosynthesis protein AlgZ/FimS insig. 67 99
o Pseudomonas sp. S08-1 OH686_20045 RNA polymerase sigma factor RpoE strong 67 99
o Pseudomonas putida KT2440 PP_1427 RNA polymerase sigma E factor sig. 67 99
o Pseudomonas stutzeri RCH2 Psest_3100 RNA polymerase sigma factor RpoE strong 67 99
o Pseudomonas fluorescens FW300-N2E3 AO353_17625 RNA polymerase subunit sigma strong 67 99
o Pseudomonas fluorescens SBW25 PFLU_RS07230 RNA polymerase sigma factor RpoE sig. 67 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07230 RNA polymerase sigma factor RpoE strong 67 99
o Pseudomonas sp. DMC3 GFF2277 RNA polymerase sigma-H factor cofit 67 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01572 RNA polymerase sigma-H factor cofit 67 99
o Pseudomonas sp. RS175 PFR28_00690 RNA polymerase sigma-H factor strong 67 99
o Pseudomonas orientalis W4I3 QF045_RS09835 RNA polymerase sigma factor RpoE cofit 67 99
o Pseudomonas simiae WCS417 PS417_07120 RNA polymerase sigma-H factor strong 67 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT sig. 67 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT no data 67 99
o Pseudomonas fluorescens FW300-N2C3 AO356_04575 RNA polymerase subunit sigma strong 67 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT strong 67 99
o Pseudomonas sp. SVBP6 COO64_RS16525 rpoE RNA polymerase sigma factor RpoE insig. 66 99
o Pseudomonas aeruginosa MRSN321 PFGADD_04374 algU alginate biosynthesis protein AlgZ/FimS strong 67 99
o Pseudomonas aeruginosa PA14 IKLFDK_03265 alginate biosynthesis protein AlgZ/FimS strong 67 99
o Pseudomonas aeruginosa PUPa3 NPBIFN_04430 algU alginate biosynthesis protein AlgZ/FimS strong 67 99
o Pseudomonas syringae pv. syringae B728a Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 66 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 66 99
o Rhodanobacter sp. FW510-T8 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE strong 61 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07180 RNA polymerase sigma factor RpoE strong 62 100
o Rhodanobacter denitrificans MT42 LRK55_RS16655 RNA polymerase sigma factor RpoE no data 61 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16940 RNA polymerase sigma factor RpoE strong 61 97
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12005 RNA polymerase sigma factor RpoE no data 61 97
o Lysobacter sp. OAE881 ABIE51_RS13890 RNA polymerase sigma factor RpoE strong 60 97
o Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 62 99
o Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 61 99
o Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 61 100
o Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 61 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 61 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 61 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 60 99
o Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 60 99
o Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 60 99
o Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 60 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 60 99
o Dechlorosoma suillum PS Dsui_2453 RNA polymerase sigma factor RpoE no data 59 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3681.1 RNA polymerase sigma factor RpoE insig. 55 98
o Castellaniella sp019104865 MT123 ABCV34_RS08355 RNA polymerase sigma factor RpoE strong 55 100
o Methylophilus sp. DMC18 GFF2730 RNA polymerase sigma-H factor no data 57 97
  Marinobacter adhaerens HP15 HP15_775 RNA polymerase sigma-70 RpoE type insig. 55 97
o Acidovorax sp. GW101-3H11 Ac3H11_1573 RNA polymerase sigma factor RpoE no data 53 97
o Variovorax sp. OAS795 ABID97_RS08330 RNA polymerase sigma factor RpoE strong 52 97
o Variovorax sp. SCN45 GFF3863 RNA polymerase sigma factor RpoE insig. 51 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3339 RNA polymerase sigma factor RpoE cofit 51 95
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 38 92
o Synechococcus elongatus PCC 7942 Synpcc7942_1923 sigG RNA polymerase sigma factor RpoE strong 37 94
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11965 RNA polymerase subunit sigma insig. 32 88
  Lysobacter sp. OAE881 ABIE51_RS16295 sigma-70 family RNA polymerase sigma factor insig. 37 90
o Synechocystis sp000284455 PCC 6803 SGL_RS06480 sigma-70 family RNA polymerase sigma factor no data 35 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00665 RNA polymerase subunit sigma-24 strong 35 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01538 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 93
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01700 RNA polymerase sigma factor insig. 30 95
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13970 RNA polymerase sigma factor cofit 31 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS18240 RNA polymerase sigma factor insig. 30 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2047 RNA polymerase sigma factor, sigma-70 family strong 30 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS22010 RNA polymerase sigma factor insig. 34 100
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15190 RNA polymerase sigma factor insig. 30 96
  Xanthobacter sp. DMC5 GFF1406 RNA polymerase sigma-H factor insig. 32 92
  Alteromonas macleodii MIT1002 MIT1002_00882 Sigma-W factor insig. 33 90
  Pseudomonas sp. S08-1 OH686_05515 RNA polymerase sigma factor RpoE cofit 33 91
  Paraburkholderia graminis OAS925 ABIE53_005146 RNA polymerase sigma factor (sigma-70 family) sig. 31 89
  Variovorax sp. OAS795 ABID97_RS28845 RNA polymerase sigma factor insig. 31 93
  Shewanella amazonensis SB2B Sama_2611 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 30 96
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19220 sigma-70 family RNA polymerase sigma factor insig. 29 97
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04580 sigma-70 family RNA polymerase sigma factor insig. 31 94
  Castellaniella sp019104865 MT123 ABCV34_RS11175 sigma-70 family RNA polymerase sigma factor insig. 33 89
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13725 sigma-70 family RNA polymerase sigma factor strong 31 96
  Lysobacter sp. OAE881 ABIE51_RS18540 sigma-70 family RNA polymerase sigma factor insig. 30 94
  Rhodanobacter denitrificans MT42 LRK55_RS05200 sigma-70 family RNA polymerase sigma factor insig. 31 96
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05425 sigma-70 family RNA polymerase sigma factor insig. 31 96
  Shewanella oneidensis MR-1 SO3840 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 29 92
  Shewanella sp. ANA-3 Shewana3_0763 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 28 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11315 sigma-70 family RNA polymerase sigma factor insig. 31 90
  Kangiella aquimarina DSM 16071 B158DRAFT_2027 RNA polymerase sigma factor, sigma-70 family insig. 32 90
  Rhodanobacter denitrificans MT42 LRK55_RS11045 sigma-70 family RNA polymerase sigma factor cofit 32 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 32 90
  Synechocystis sp000284455 PCC 6803 SGL_RS08165 sigma-70 family RNA polymerase sigma factor strong 32 93
  Shewanella loihica PV-4 Shew_2956 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 28 96
  Rhodanobacter sp. FW510-T8 OKGIIK_01380 rpoE RNA polymerase subunit sigma-24 insig. 40 72
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00445 sigma-70 family RNA polymerase sigma factor insig. 28 98
  Bifidobacterium breve UCC2003 BBR_RS15930 RNA polymerase sigma factor insig. 33 90
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 32 94
  Rhodanobacter sp. FW510-T8 OKGIIK_12575 rpoE RNA polymerase subunit sigma-24 insig. 31 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21575 RNA polymerase subunit sigma insig. 31 100
  Alteromonas macleodii MIT1002 MIT1002_03807 Sigma-W factor insig. 29 92
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 31 94
  Bacteroides thetaiotaomicron VPI-5482 BT4571 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 28 91
  Cellulophaga baltica 18 M666_RS18230 RNA polymerase sigma factor insig. 27 95
  Xanthobacter sp. DMC5 GFF1190 ECF RNA polymerase sigma factor SigR insig. 36 76
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18950 sigma-70 family RNA polymerase sigma factor insig. 33 86
  Sinorhizobium meliloti 1021 SM_b20592 RNA polymerase sigma factor insig. 31 90
  Cellulophaga baltica 18 M666_RS11420 RNA polymerase sigma factor insig. 28 94
  Rhodanobacter sp. FW510-T8 OKGIIK_14780 RNA polymerase subunit sigma-70 insig. 28 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01799 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 87
  Rhodanobacter denitrificans MT42 LRK55_RS04975 sigma-70 family RNA polymerase sigma factor cofit 29 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05195 sigma-70 family RNA polymerase sigma factor insig. 29 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2952 RNA polymerase sigma factor, sigma-70 family strong 30 91
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19215 RNA polymerase subunit sigma sig. 29 81
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10790 RNA polymerase sigma factor insig. 31 92
  Kangiella aquimarina DSM 16071 B158DRAFT_0596 RNA polymerase sigma factor, sigma-70 family insig. 25 94
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00075 RNA polymerase sigma factor cofit 30 93
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 32 74
  Bacteroides stercoris CC31F HMPREF1181_RS05860 sigma-70 family RNA polymerase sigma factor insig. 29 88
  Pseudomonas aeruginosa MRSN321 PFGADD_01675 RNA polymerase subunit sigma-24 insig. 32 91
  Pseudomonas aeruginosa PUPa3 NPBIFN_01711 RNA polymerase subunit sigma-24 sig. 32 91
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3183.1 RNA polymerase sigma factor RpoE insig. 28 96
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor insig. 27 99
  Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 32 74
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04205 sigma-70 family RNA polymerase sigma factor insig. 29 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10600 RNA polymerase subunit sigma-24 strong 33 79
  Pseudomonas aeruginosa PA14 IKLFDK_16830 RNA polymerase subunit sigma-24 sig. 32 91
  Azospirillum sp. SherDot2 MPMX19_05475 hypothetical protein no data 31 84
  Rhodanobacter denitrificans MT42 LRK55_RS07625 RNA polymerase sigma factor insig. 28 88
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07895 RNA polymerase sigma factor insig. 28 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0443 RNA polymerase sigma factor, sigma-70 family insig. 28 95
  Bacteroides ovatus ATCC 8483 BACOVA_05165 Sigma-70 region 2 insig. 26 89
  Bacteroides stercoris CC31F HMPREF1181_RS11830 sigma-70 family RNA polymerase sigma factor insig. 29 95
  Pseudomonas orientalis W4I3 QF045_RS22475 RNA polymerase sigma factor insig. 30 90
  Rhizobium sp. OAE497 ABIE40_RS15675 sigma-70 family RNA polymerase sigma factor insig. 31 79
  Cellulophaga baltica 18 M666_RS15960 RNA polymerase sigma factor insig. 29 92
  Bacteroides thetaiotaomicron VPI-5482 BT4347 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 28 88
  Rhodanobacter sp. FW510-T8 OKGIIK_14380 RNA polymerase sigma factor insig. 27 88
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04785 sigma-70 family RNA polymerase sigma factor insig. 28 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15905 RNA polymerase sigma factor cofit 29 93
  Bacteroides thetaiotaomicron VPI-5482 BT2044 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 32 93
  Castellaniella sp019104865 MT123 ABCV34_RS07155 RNA polymerase sigma factor insig. 27 94
  Cupriavidus basilensis FW507-4G11 RR42_RS16520 RNA polymerase sigma factor insig. 31 87
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 28 94
  Pseudomonas segetis P6 ACVTMO_RS16165 RNA polymerase sigma factor sig. 29 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04263 ECF RNA polymerase sigma-E factor cofit 29 90
  Bacteroides ovatus ATCC 8483 BACOVA_05461 Sigma-70 region 2 cofit 29 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19950 RNA polymerase subunit sigma-24 insig. 28 93
  Pseudomonas sp. S08-1 OH686_11525 hypothetical protein cofit 31 91
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16905 sigma-70 family RNA polymerase sigma factor insig. 27 92
  Bacteroides thetaiotaomicron VPI-5482 BT4647 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 31 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07715 RNA polymerase sigma factor no data 30 86
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3635.1 RNA polymerase ECF-type sigma factor insig. 35 71
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4527 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 82
  Bacteroides ovatus ATCC 8483 BACOVA_00669 Sigma-70 region 2 insig. 31 93
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16945 RNA polymerase sigma factor sig. 27 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19605 RNA polymerase insig. 27 96
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 26 95
  Rhodopseudomonas palustris CGA009 TX73_023085 RNA polymerase sigma factor cofit 29 96
  Pseudomonas sp. DMC3 GFF2343 ECF RNA polymerase sigma-E factor insig. 32 90
  Bacteroides thetaiotaomicron VPI-5482 BT3190 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 31 92
  Caulobacter crescentus NA1000 CCNA_02837 RNA polymerase ECF-type sigma factor insig. 28 92
  Caulobacter crescentus NA1000 Δfur CCNA_02837 RNA polymerase ECF-type sigma factor cofit 28 92
  Bacteroides stercoris CC31F HMPREF1181_RS08110 sigma-70 family RNA polymerase sigma factor insig. 29 93
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4578 RNA polymerase sigma factor, sigma-70 family insig. 27 93
  Phocaeicola dorei CL03T12C01 ABI39_RS12815 sigma-70 family RNA polymerase sigma factor insig. 27 92
  Azospirillum brasilense Sp245 AZOBR_RS31600 RNA polymerase insig. 28 96
  Cellulophaga baltica 18 M666_RS05355 sigma-70 family RNA polymerase sigma factor insig. 33 75
  Bacteroides thetaiotaomicron VPI-5482 BT1817 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 28 94
  Herbaspirillum seropedicae SmR1 HSERO_RS12085 RNA polymerase sigma-E factor protein insig. 26 92
  Sphingobium sp. HT1-2 GFF4485 RNA polymerase sigma factor cnrH cofit 28 96
  Phocaeicola dorei CL03T12C01 ABI39_RS12855 RNA polymerase sigma factor insig. 27 90
  Phocaeicola dorei CL03T12C01 ABI39_RS11710 RNA polymerase sigma factor insig. 28 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15730 RNA polymerase sigma factor sig. 28 84
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00650 RNA polymerase sigma factor insig. 27 88
  Paraburkholderia graminis OAS925 ABIE53_002003 RNA polymerase sigma factor (sigma-70 family) sig. 32 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3390 RNA polymerase sigma factor RpoE insig. 31 90
  Pseudomonas simiae WCS417 PS417_20565 RNA polymerase subunit sigma-24 insig. 29 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23205 hypothetical protein insig. 24 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14290 sigma-70 family RNA polymerase sigma factor insig. 31 96
  Pseudomonas sp. SVBP6 COO64_RS21990 RNA polymerase sigma factor insig. 29 89
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 28 92
  Rhodopseudomonas palustris CGA009 TX73_024905 sigma-70 family RNA polymerase sigma factor insig. 26 95
  Phocaeicola dorei CL03T12C01 ABI39_RS00235 sigma-70 family RNA polymerase sigma factor sig. 26 95
  Phocaeicola dorei CL03T12C01 ABI39_RS09920 sigma-70 family RNA polymerase sigma factor insig. 31 96
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14945 RNA polymerase subunit sigma-24 strong 28 91
  Herbaspirillum seropedicae SmR1 HSERO_RS03905 RNA polymerase subunit sigma-24 insig. 31 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04530 sigma-70 family RNA polymerase sigma factor insig. 28 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07720 sigma-70 family RNA polymerase sigma factor strong 26 95
  Burkholderia phytofirmans PsJN BPHYT_RS08845 RNA polymerase sigma factor insig. 30 86
  Pseudomonas fluorescens SBW25 PFLU_RS22255 RNA polymerase sigma factor cofit 29 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22255 RNA polymerase sigma factor insig. 29 90
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 28 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07040 RNA polymerase sigma factor insig. 32 96
  Pseudomonas orientalis W4I3 QF045_RS06435 RNA polymerase sigma factor insig. 31 84
  Cellulophaga baltica 18 M666_RS08305 RNA polymerase sigma factor insig. 25 90
  Pseudomonas fluorescens FW300-N2E3 AO353_18235 RNA polymerase subunit sigma-24 insig. 30 90
  Kangiella aquimarina DSM 16071 B158DRAFT_0015 RNA polymerase sigma factor, sigma-70 family insig. 30 83
  Mycobacterium tuberculosis H37Rv Rv2069 RNA polymerase sigma factor, ECF subfamily, SigC insig. 30 93
  Pseudomonas syringae pv. syringae B728a Psyr_1217 Sigma-70 region 2:Sigma-70 region 4 strong 29 80
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1217 Sigma-70 region 2:Sigma-70 region 4 cofit 29 80
  Burkholderia phytofirmans PsJN BPHYT_RS24975 RNA polymerase sigma24 factor strong 28 93
  Sphingobium sp. HT1-2 GFF5350 sigma-24 (FecI-like) protein insig. 25 95
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0603 RNA polymerase sigma factor, sigma-70 family sig. 21 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05041 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 80
  Marinobacter adhaerens HP15 HP15_950 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 28 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2692 RNA polymerase sigma factor RpoE sig. 28 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2774 RNA polymerase sigma factor, sigma-70 family insig. 27 94
  Pseudomonas aeruginosa MRSN321 PFGADD_02077 sbrI ECF family RNA polymerase sigma factor SbrI insig. 27 97
  Pseudomonas aeruginosa PA14 IKLFDK_14715 ECF family RNA polymerase sigma factor SbrI insig. 27 97
  Pseudomonas aeruginosa PUPa3 NPBIFN_02116 sbrI ECF family RNA polymerase sigma factor SbrI insig. 27 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS01445 sigma-70 family RNA polymerase sigma factor insig. 27 96
  Lysobacter sp. OAE881 ABIE51_RS13770 RNA polymerase sigma factor insig. 31 88
  Pseudomonas fluorescens FW300-N2C3 AO356_04270 RNA polymerase subunit sigma-24 insig. 28 90
  Caulobacter crescentus NA1000 CCNA_01718 RNA polymerase ECF sigma factor insig. 28 94
  Caulobacter crescentus NA1000 Δfur CCNA_01718 RNA polymerase ECF sigma factor cofit 28 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13165 RNA polymerase sigma factor insig. 23 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02680 RNA polymerase subunit sigma-70 insig. 31 95
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00902 ECF RNA polymerase sigma factor SigC insig. 29 85
  Pseudomonas sp. RS175 PFR28_00741 ECF RNA polymerase sigma-E factor insig. 28 91
  Dinoroseobacter shibae DFL-12 Dshi_2428 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 26 95
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19085 RNA polymerase subunit sigma-24 insig. 26 90
  Sphingobium sp. HT1-2 GFF5201 sigma-24 (FecI-like) protein insig. 26 94