Homologs of LRK55_RS02455 from Rhodanobacter denitrificans MT42

ribosome silencing factor
SEED: Ribosomal silencing factor RsfA (former Iojap)
KEGG: ribosome-associated protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans MT42 LRK55_RS02455 ribosome silencing factor insig. 100 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02700 ribosome silencing factor sig. 100 100
o Rhodanobacter sp. FW510-T8 OKGIIK_09755 rsfS ribosome silencing factor cofit 98 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09060 ribosome silencing factor no data 86 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1874.1 Iojap protein insig. 69 92
o Lysobacter sp. OAE881 ABIE51_RS06745 ribosome silencing factor insig. 67 96
  Kangiella aquimarina DSM 16071 B158DRAFT_0086 iojap-like ribosome-associated protein strong 55 77
o Acinetobacter radioresistens SK82 MPMX26_00531 Ribosomal silencing factor RsfS strong 52 86
  Dickeya dianthicola ME23 DZA65_RS06570 ribosome silencing factor insig. 55 80
  Dickeya dianthicola 67-19 HGI48_RS06225 ribosome silencing factor insig. 57 77
  Pseudomonas sp. S08-1 OH686_09330 ribosome silencing factor insig. 60 77
  Dickeya dadantii 3937 DDA3937_RS06180 ribosome silencing factor insig. 56 77
  Marinobacter adhaerens HP15 HP15_603 Iojap-related protein sig. 59 77
  Pectobacterium carotovorum WPP14 HER17_RS15235 ribosome silencing factor insig. 55 77
  Escherichia coli BL21 ECD_00606 ribosomal silencing factor cofit 53 78
  Escherichia fergusonii Becca EFB2_03455 Ribosomal silencing factor RsfS insig. 53 78
  Escherichia coli ECOR27 NOLOHH_23730 rsfS ribosome silencing factor cofit 53 78
  Escherichia coli ECOR38 HEPCGN_00920 rsfS ribosome silencing factor no data 53 78
  Escherichia coli ECRC101 OKFHMN_07355 rsfS ribosome silencing factor insig. 53 78
  Escherichia coli ECRC101 MCAODC_26570 rsfS ribosome silencing factor insig. 53 78
  Escherichia coli ECRC102 NIAGMN_05410 rsfS ribosome silencing factor insig. 53 78
  Escherichia coli ECRC62 BNILDI_21740 rsfS ribosome silencing factor insig. 53 78
  Escherichia coli ECRC98 JDDGAC_11000 rsfS ribosome silencing factor no data 53 78
  Escherichia coli ECRC99 KEDOAH_20615 rsfS ribosome silencing factor no data 53 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03069 Ribosomal silencing factor RsfS insig. 53 78
  Escherichia coli Nissle 1917 ECOLIN_RS03470 ribosome silencing factor no data 53 78
  Escherichia coli BW25113 b0637 ybeB orf, hypothetical protein (VIMSS) no data 53 78
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4550 Iojap protein insig. 53 78
  Pantoea sp. MT58 IAI47_14015 ribosome silencing factor sig. 53 78
  Enterobacter asburiae PDN3 EX28DRAFT_2326 ribosome silencing factor RsfS/YbeB/iojap insig. 56 77
  Enterobacter sp. TBS_079 MPMX20_01296 Ribosomal silencing factor RsfS insig. 56 77
o Alteromonas macleodii MIT1002 MIT1002_01853 Ribosomal silencing factor RsfS insig. 54 80
  Klebsiella michiganensis M5al BWI76_RS08045 ribosome silencing factor RsfS no data 54 78
o Shewanella sp. ANA-3 Shewana3_0997 iojap-like protein (RefSeq) no data 50 83
o Shewanella oneidensis MR-1 SO1170 iojap domain protein (NCBI ptt file) sig. 50 80
o Pseudomonas stutzeri RCH2 Psest_0510 iojap-like ribosome-associated protein sig. 53 81
o Shewanella loihica PV-4 Shew_2933 iojap-like protein (RefSeq) no data 51 83
  Pseudomonas fluorescens FW300-N2C3 AO356_15300 ribosome silencing factor no data 44 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4995 Iojap protein no data 46 89
  Dechlorosoma suillum PS Dsui_0452 iojap-like ribosome-associated protein insig. 53 77
  Castellaniella sp019104865 MT123 ABCV34_RS02535 ribosome silencing factor insig. 48 77
  Pseudomonas sp. RS175 PFR28_03870 Ribosomal silencing factor RsfS no data 45 88
o Pseudomonas syringae pv. syringae B728a Psyr_4367 Iojap-related protein insig. 50 84
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4367 Iojap-related protein insig. 50 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2690 Iojap protein no data 47 89
  Pseudomonas fluorescens FW300-N2E3 AO353_06485 ribosome silencing factor no data 47 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_04870 ribosome silencing factor insig. 46 77
  Pseudomonas putida KT2440 PP_4809 Ribosomal silencing factor RsfS no data 46 84
  Pseudomonas fluorescens SBW25 PFLU_RS26665 ribosome silencing factor no data 45 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26665 ribosome silencing factor no data 45 89
  Pseudomonas simiae WCS417 PS417_24735 ribosome-associated protein IOJAP no data 45 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1358 Iojap protein no data 46 89
  Rahnella sp. WP5 EX31_RS23130 ribosome silencing factor insig. 49 77
  Shewanella amazonensis SB2B Sama_2586 iojap domain-containing protein (RefSeq) sig. 48 77
  Erwinia tracheiphila SCR3 LU632_RS16365 rsfS ribosome silencing factor insig. 48 79
  Serratia liquefaciens MT49 IAI46_05940 ribosome silencing factor no data 46 78
o Phaeobacter inhibens DSM 17395 PGA1_c29760 iojap-like ribosome-associated protein sig. 48 80
o Rhodopseudomonas palustris CGA009 TX73_000865 ribosome silencing factor insig. 47 81
  Ralstonia solanacearum PSI07 RPSI07_RS13665 ribosome silencing factor insig. 46 77
  Ralstonia solanacearum GMI1000 RS_RS11010 ribosome silencing factor insig. 46 77
  Herbaspirillum seropedicae SmR1 HSERO_RS17775 hypothetical protein no data 48 88
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03560 ribosome silencing factor strong 46 77
  Ralstonia solanacearum UW163 UW163_RS10110 ribosome silencing factor insig. 46 77
  Rhizobium sp. OAE497 ABIE40_RS18960 ribosome silencing factor insig. 45 80
  Ralstonia sp. UNC404CL21Col ABZR87_RS15425 ribosome silencing factor sig. 46 77
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14820 ribosome silencing factor cofit 41 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS24415 ribosome silencing factor insig. 44 77
  Bosea sp. OAE506 ABIE41_RS07570 ribosome silencing factor insig. 48 71
  Cupriavidus basilensis FW507-4G11 RR42_RS04715 ribosome silencing factor RsfS insig. 45 77
  Caulobacter crescentus NA1000 CCNA_03545 iojap protein family no data 43 79
  Caulobacter crescentus NA1000 Δfur CCNA_03545 iojap protein family no data 43 79
  Paraburkholderia graminis OAS925 ABIE53_001542 ribosome-associated protein sig. 43 77
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04518 ribosome-associated protein insig. 43 77
  Burkholderia phytofirmans PsJN BPHYT_RS06390 ribosome-associated protein IOJAP sig. 42 77
  Azospirillum brasilense Sp245 AZOBR_RS04065 ribosome-associated protein IOJAP insig. 43 77
  Sinorhizobium meliloti 1021 SMc03780 hypothetical protein sig. 42 85
  Agrobacterium fabrum C58 Atu2777 hypothetical protein sig. 40 82
  Dinoroseobacter shibae DFL-12 Dshi_0087 iojap-like protein (RefSeq) insig. 45 73
  Variovorax sp. OAS795 ABID97_RS16720 ribosome silencing factor insig. 38 80
  Variovorax sp. SCN45 GFF299 Ribosomal silencing factor RsfA cofit 38 80
  Magnetospirillum magneticum AMB-1 AMB_RS23800 ribosome silencing factor insig. 48 71
  Acidovorax sp. GW101-3H11 Ac3H11_2419 Iojap protein strong 38 77
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2504 ribosome silencing factor RsfS/YbeB/iojap strong 44 80
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16245 ribosome silencing factor cofit 37 88
  Rhodospirillum rubrum S1H Rru_A1236 Iojap-related protein (NCBI) insig. 46 72
  Bifidobacterium breve UCC2003 BBR_RS14420 ribosome silencing factor insig. 45 73
  Azospirillum sp. SherDot2 MPMX19_01941 Ribosomal silencing factor RsfS insig. 45 63
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4528 Iojap protein cofit 36 77
o Desulfovibrio vulgaris Hildenborough JW710 DVU1618 iojap-related protein (TIGR) no data 39 85
  Mycobacterium tuberculosis H37Rv Rv2420c Conserved hypothetical protein no data 46 66
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2428 iojap-like ribosome-associated protein sig. 39 81
  Bacteroides thetaiotaomicron VPI-5482 BT4008 conserved hypothetical protein (NCBI ptt file) strong 38 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14110 ribosome silencing factor insig. 37 78
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20060 ribosome silencing factor RsfS strong 39 80
  Synechococcus elongatus PCC 7942 Synpcc7942_0164 Iojap-related protein strong 43 68
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21000 ribosome silencing factor strong 38 80
  Phocaeicola dorei CL03T12C01 ABI39_RS09760 ribosome silencing factor insig. 37 78
  Bacteroides ovatus ATCC 8483 BACOVA_04827 iojap-like protein strong 36 80
  Bacteroides stercoris CC31F HMPREF1181_RS09150 ribosome silencing factor strong 36 77
  Desulfovibrio vulgaris Miyazaki F DvMF_0440 iojap-like protein (RefSeq) strong 34 84