Homologs of LRK53_RS01985 from Rhodanobacter sp000427505 FW510-R12

DISARM system SNF2-like helicase DrmD
SEED: ATP-dependent RNA helicase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01985 DISARM system SNF2-like helicase DrmD insig. 100 100
o Enterobacter sp. TBS_079 MPMX20_00569 RNA polymerase-associated protein RapA insig. 74 99
o Paraburkholderia graminis OAS925 ABIE53_003106 superfamily II DNA or RNA helicase insig. 49 88
o Bosea sp. OAE506 ABIE41_RS19075 DISARM system SNF2-like helicase DrmD insig. 37 64
  Sinorhizobium meliloti 1021 SMc02152 helicase insig. 31 55
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14095 hypothetical protein insig. 28 63
  Pseudomonas sp. S08-1 OH686_23015 hypothetical protein insig. 28 64
  Rhodopseudomonas palustris CGA009 TX73_011450 helicase-related protein insig. 28 60
  Azospirillum brasilense Sp245 AZOBR_RS30290 RNA helicase insig. 29 49
  Pseudomonas segetis P6 ACVTMO_RS09795 DEAD/DEAH box helicase insig. 26 49
  Castellaniella sp019104865 MT123 ABCV34_RS02050 helicase-related protein cofit 27 66
  Escherichia coli ECRC100 OKFHMN_11670 hepA helicase cofit 29 47
  Escherichia coli ECRC101 MCAODC_02185 hepA helicase strong 29 47
  Escherichia coli ECRC102 NIAGMN_09520 hepA helicase cofit 29 47
  Escherichia coli ECRC62 BNILDI_09545 hepA helicase cofit 29 47
  Escherichia coli ECRC98 JDDGAC_15270 hepA helicase cofit 29 47
  Escherichia coli ECRC99 KEDOAH_16475 hepA helicase no data 29 47
  Paraburkholderia sabiae LMG 24235 QEN71_RS00695 DEAD/DEAH box helicase cofit 29 48
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 28 49
  Rahnella sp. WP5 EX31_RS03745 RNA polymerase-associated protein RapA cofit 26 45
  Pantoea sp. MT58 IAI47_16055 RNA polymerase-associated protein RapA cofit 27 45
  Shewanella sp. ANA-3 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) sig. 25 64
  Shewanella oneidensis MR-1 SO0575 hepA RNA polymerase-associated protein HepA (NCBI ptt file) sig. 27 46
  Pectobacterium carotovorum WPP14 HER17_RS02990 RNA polymerase-associated protein RapA cofit 26 46
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 26 46
  Marinobacter adhaerens HP15 HP15_3376 RNA polymerase-associated protein RapA strong 27 45
  Shewanella amazonensis SB2B Sama_3131 ATP-dependent helicase HepA (RefSeq) sig. 26 45
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12940 RNA polymerase-associated protein RapA cofit 38 17
  Serratia liquefaciens MT49 IAI46_03275 RNA polymerase-associated protein RapA insig. 36 17
  Acinetobacter baumannii LAC-4 RR41_RS05200 RNA polymerase-associated protein RapA insig. 38 18
  Dickeya dadantii 3937 DDA3937_RS18235 RNA polymerase-associated protein RapA sig. 38 17
  Escherichia coli BL21 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase strong 36 17
  Escherichia fergusonii Becca EFB2_03986 RNA polymerase-associated protein RapA insig. 36 17
  Escherichia coli ECOR27 NOLOHH_03145 rapA RNA polymerase-associated protein RapA strong 36 17
  Escherichia coli ECRC100 OKFHMN_10800 rapA RNA polymerase-associated protein RapA strong 36 17
  Escherichia coli ECRC101 MCAODC_01315 rapA RNA polymerase-associated protein RapA strong 36 17
  Escherichia coli ECRC102 NIAGMN_08650 rapA RNA polymerase-associated protein RapA strong 36 17
  Escherichia coli ECRC62 BNILDI_08460 rapA RNA polymerase-associated protein RapA cofit 36 17
  Escherichia coli ECRC98 JDDGAC_14395 rapA RNA polymerase-associated protein RapA strong 36 17
  Escherichia coli ECRC99 KEDOAH_17355 rapA RNA polymerase-associated protein RapA no data 36 17
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03599 RNA polymerase-associated protein RapA strong 36 17
  Escherichia coli Nissle 1917 ECOLIN_RS00315 RNA polymerase-associated protein RapA strong 36 17
  Escherichia coli BW25113 b0059 hepA ATP-dependent helicase HepA (NCBI) strong 36 17
  Erwinia amylovora T8 OLJFJH_01340 RNA polymerase-associated protein RapA strong 36 17
  Escherichia coli ECOR38 HEPCGN_08790 rapA RNA polymerase-associated protein RapA cofit 36 17
  Dickeya dianthicola 67-19 HGI48_RS18170 RNA polymerase-associated protein RapA cofit 37 17
  Dickeya dianthicola ME23 DZA65_RS19310 RNA polymerase-associated protein RapA cofit 37 17
  Acinetobacter radioresistens SK82 MPMX26_01027 RNA polymerase-associated protein RapA strong 38 17
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) cofit 36 17
  Pseudomonas sp. BP01 JOY50_RS24235 rapA RNA polymerase-associated protein RapA cofit 25 53
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_06075 RNA polymerase-associated protein RapA insig. 36 17
  Erwinia tracheiphila SCR3 LU632_RS02805 rapA RNA polymerase-associated protein RapA sig. 36 17
  Klebsiella michiganensis M5al BWI76_RS04570 RNA polymerase-associated protein RapA strong 34 17
  Klebsiella pneumoniae MKP103 KDGMDA_12795 RNA polymerase-associated protein RapA sig. 34 17
  Enterobacter sp. TBS_079 MPMX20_00753 RNA polymerase-associated protein RapA strong 34 17
  Shewanella loihica PV-4 Shew_0457 ATP-dependent helicase HepA (RefSeq) sig. 35 17
  Enterobacter asburiae PDN3 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family cofit 34 17
  Pseudomonas sp. S08-1 OH686_19955 RNA polymerase associated protein RapA insig. 36 17
  Vibrio cholerae E7946 ATCC 55056 CSW01_12705 RNA polymerase-associated protein RapA insig. 34 17
  Pseudomonas stutzeri RCH2 Psest_1327 Superfamily II DNA/RNA helicases, SNF2 family sig. 36 17
  Pseudomonas aeruginosa MRSN321 DY961_RS00330 rapA;go_function=ATP RNA polymerase-associated protein RapA cofit 38 17
  Pseudomonas aeruginosa PA14 IKLFDK_16965 RNA polymerase-associated protein RapA sig. 38 17
  Pseudomonas aeruginosa PUPa3 DQ20_RS40690 rapA;go_function=ATP RNA polymerase-associated protein RapA sig. 38 17
  Alteromonas macleodii MIT1002 MIT1002_00659 RNA polymerase-associated protein RapA cofit 32 18
  Pseudomonas aeruginosa PUPa3 DQ20_RS34555 SNF2-related protein strong 35 19
  Pseudomonas segetis P6 ACVTMO_RS09785 SNF2-related protein insig. 35 19
  Pseudomonas orientalis W4I3 QF045_RS09435 RNA polymerase-associated protein RapA insig. 37 17
  Pseudomonas fluorescens SBW25 PFLU_RS06675 RNA polymerase-associated protein RapA cofit 37 17
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06675 RNA polymerase-associated protein RapA sig. 37 17
  Pseudomonas segetis P6 ACVTMO_RS16290 rapA RNA polymerase-associated protein RapA sig. 36 17
  Pseudomonas sp. DMC3 GFF2193 RNA polymerase-associated protein RapA cofit 36 17
  Pseudomonas syringae pv. syringae B728a Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit sig. 36 17
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit sig. 36 17
  Pseudomonas sp. SVBP6 COO64_RS17145 rapA RNA polymerase-associated protein RapA cofit 36 17
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01492 RNA polymerase-associated protein RapA insig. 36 17
  Pseudomonas putida KT2440 PP_1145 RNA polymerase-associated protein RapA sig. 36 17
  Pseudomonas simiae WCS417 PS417_06645 RNA polymerase-associated protein RapA strong 36 17
  Pseudomonas fluorescens FW300-N2E3 AO353_17155 RNA polymerase-associated protein RapA sig. 36 17
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07105 RNA polymerase-associated protein RapA insig. 34 17
  Rhodanobacter denitrificans MT42 LRK55_RS02635 RNA polymerase-associated protein RapA strong 34 17
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02885 RNA polymerase-associated protein RapA strong 34 17
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3224 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 36 17
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2845 RNA polymerase associated protein RapA (EC 3.6.1.-) strong 36 17
  Pseudomonas fluorescens FW300-N2C3 AO356_04975 RNA polymerase-associated protein RapA sig. 35 17
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4599 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 36 17
  Pseudomonas sp. RS175 PFR28_00612 RNA polymerase-associated protein RapA insig. 36 17
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09245 RNA polymerase-associated protein RapA sig. 36 17
  Rhodanobacter sp. FW510-T8 OKGIIK_09865 rapA RNA polymerase-associated protein RapA insig. 33 17
  Pseudomonas aeruginosa PUPa3 DQ20_RS34555 SNF2-related protein strong 31 17
  Pseudomonas segetis P6 ACVTMO_RS09785 SNF2-related protein insig. 31 17
  Pseudomonas aeruginosa PUPa3 DQ20_RS34580 phospholipase D-like domain-containing anti-phage protein strong 33 16
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6015 RNA polymerase associated protein RapA (EC 3.6.1.-) insig. 31 19
  Bosea sp. OAE506 ABIE41_RS12660 DEAD/DEAH box helicase insig. 36 10
  Rhodopseudomonas palustris CGA009 TX73_020730 DEAD/DEAH box helicase insig. 35 11
  Erwinia amylovora T8 OLJFJH_01340 RNA polymerase-associated protein RapA strong 33 11
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3407 Superfamily II DNA and RNA helicases insig. 36 10
  Pseudomonas aeruginosa MRSN321 DY961_RS03505 helicase-related protein strong 34 17
  Pseudomonas aeruginosa MRSN321 DY961_RS03505 helicase-related protein strong 26 14
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) cofit 31 11
  Enterobacter sp. TBS_079 MPMX20_00753 RNA polymerase-associated protein RapA strong 38 7