Homologs of IAI47_14015 from Pantoea sp. MT58

ribosome silencing factor
SEED: Ribosomal silencing factor RsfA (former Iojap)
KEGG: ribosome-associated protein

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Pantoea sp. MT58	IAI47_14015		ribosome silencing factor	sig.	100	100
o	Escherichia coli BL21	ECD_00606		ribosomal silencing factor	cofit	84	100
o	Escherichia fergusonii Becca	EFB2_03455		Ribosomal silencing factor RsfS	insig.	84	100
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_03069		Ribosomal silencing factor RsfS	insig.	84	100
o	Escherichia coli Nissle 1917	ECOLIN_RS03470		ribosome silencing factor	no data	84	100
o	Escherichia coli BW25113	b0637	ybeB	orf, hypothetical protein (VIMSS)	no data	84	100
o	Pectobacterium carotovorum WPP14	HER17_RS15235		ribosome silencing factor	insig.	84	99
o	Klebsiella michiganensis M5al	BWI76_RS08045		ribosome silencing factor RsfS	no data	84	100
o	Enterobacter sp. TBS_079	MPMX20_01296		Ribosomal silencing factor RsfS	insig.	86	99
o	Escherichia coli ECOR27	NOLOHH_23730	rsfS	ribosome silencing factor	cofit	83	100
o	Escherichia coli ECOR38	HEPCGN_00920	rsfS	ribosome silencing factor	no data	83	100
o	Escherichia coli ECRC101	OKFHMN_07355	rsfS	ribosome silencing factor	insig.	83	100
o	Escherichia coli ECRC101	MCAODC_26570	rsfS	ribosome silencing factor	insig.	83	100
o	Escherichia coli ECRC102	NIAGMN_05410	rsfS	ribosome silencing factor	insig.	83	100
o	Escherichia coli ECRC62	BNILDI_21740	rsfS	ribosome silencing factor	insig.	83	100
o	Escherichia coli ECRC98	JDDGAC_11000	rsfS	ribosome silencing factor	no data	83	100
o	Escherichia coli ECRC99	KEDOAH_20615	rsfS	ribosome silencing factor	no data	83	100
o	Dickeya dianthicola 67-19	HGI48_RS06225		ribosome silencing factor	insig.	85	99
	Enterobacter asburiae PDN3	EX28DRAFT_2326		ribosome silencing factor RsfS/YbeB/iojap	insig.	84	99
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF4550		Iojap protein	insig.	82	100
o	Dickeya dadantii 3937	DDA3937_RS06180		ribosome silencing factor	insig.	84	99
o	Dickeya dianthicola ME23	DZA65_RS06570		ribosome silencing factor	insig.	84	99
o	Serratia liquefaciens MT49	IAI46_05940		ribosome silencing factor	no data	79	100
o	Erwinia tracheiphila SCR3	LU632_RS16365	rsfS	ribosome silencing factor	insig.	75	100
o	Rahnella sp. WP5	EX31_RS23130		ribosome silencing factor	insig.	74	99
o	Vibrio cholerae E7946 ATCC 55056	CSW01_04870		ribosome silencing factor	insig.	63	99
o	Shewanella oneidensis MR-1	SO1170		iojap domain protein (NCBI ptt file)	sig.	57	100
o	Shewanella sp. ANA-3	Shewana3_0997		iojap-like protein (RefSeq)	no data	56	100
o	Alteromonas macleodii MIT1002	MIT1002_01853		Ribosomal silencing factor RsfS	insig.	60	100
o	Shewanella loihica PV-4	Shew_2933		iojap-like protein (RefSeq)	no data	53	100
o	Shewanella amazonensis SB2B	Sama_2586		iojap domain-containing protein (RefSeq)	sig.	55	99
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS09060		ribosome silencing factor	no data	55	95
o	Kangiella aquimarina DSM 16071	B158DRAFT_0086		iojap-like ribosome-associated protein	strong	49	99
o	Pseudomonas stutzeri RCH2	Psest_0510		iojap-like ribosome-associated protein	sig.	51	99
	Rhodanobacter denitrificans MT42	LRK55_RS02455		ribosome silencing factor	insig.	53	95
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS02700		ribosome silencing factor	sig.	53	95
	Rhodanobacter sp. FW510-T8	OKGIIK_09755	rsfS	ribosome silencing factor	cofit	53	95
o	Pseudomonas sp. S08-1	OH686_09330		ribosome silencing factor	insig.	49	99
o	Marinobacter adhaerens HP15	HP15_603		Iojap-related protein	sig.	45	99
o	Pseudomonas syringae pv. syringae B728a	Psyr_4367		Iojap-related protein	insig.	49	99
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_4367		Iojap-related protein	insig.	49	99
	Pseudomonas putida KT2440	PP_4809		Ribosomal silencing factor RsfS	no data	54	87
	Pseudomonas sp. RS175	PFR28_03870		Ribosomal silencing factor RsfS	no data	51	91
	Pseudomonas fluorescens GW456-L13	PfGW456L13_1358		Iojap protein	no data	47	98
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4995		Iojap protein	no data	47	100
	Pseudomonas fluorescens FW300-N2C3	AO356_15300		ribosome silencing factor	no data	48	98
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_2690		Iojap protein	no data	45	99
	Pseudomonas fluorescens SBW25	PFLU_RS26665		ribosome silencing factor	no data	46	99
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS26665		ribosome silencing factor	no data	46	99
	Pseudomonas simiae WCS417	PS417_24735		ribosome-associated protein IOJAP	no data	46	99
	Pseudomonas fluorescens FW300-N2E3	AO353_06485		ribosome silencing factor	no data	47	97
	Acinetobacter radioresistens SK82	MPMX26_00531		Ribosomal silencing factor RsfS	strong	44	98
o	Rhodopseudomonas palustris CGA009	TX73_000865		ribosome silencing factor	insig.	41	98
	Agrobacterium fabrum C58	Atu2777		hypothetical protein	sig.	45	93
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.1874.1		Iojap protein	insig.	53	97
	Caulobacter crescentus NA1000	CCNA_03545		iojap protein family	no data	42	97
	Caulobacter crescentus NA1000 Δfur	CCNA_03545		iojap protein family	no data	42	97
	Bosea sp. OAE506	ABIE41_RS07570		ribosome silencing factor	insig.	49	87
	Sinorhizobium meliloti 1021	SMc03780		hypothetical protein	sig.	43	97
o	Dechlorosoma suillum PS	Dsui_0452		iojap-like ribosome-associated protein	insig.	44	99
	Rhizobium sp. OAE497	ABIE40_RS18960		ribosome silencing factor	insig.	42	91
o	Azospirillum brasilense Sp245	AZOBR_RS04065		ribosome-associated protein IOJAP	insig.	42	94
	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS14820		ribosome silencing factor	cofit	43	96
	Lysobacter sp. OAE881	ABIE51_RS06745		ribosome silencing factor	insig.	54	88
o	Dinoroseobacter shibae DFL-12	Dshi_0087		iojap-like protein (RefSeq)	insig.	41	91
	Rhodospirillum rubrum S1H	Rru_A1236		Iojap-related protein (NCBI)	insig.	43	94
	Phaeobacter inhibens DSM 17395	PGA1_c29760		iojap-like ribosome-associated protein	sig.	43	90
	Castellaniella sp019104865 MT123	ABCV34_RS02535		ribosome silencing factor	insig.	42	93
	Sphingomonas koreensis DSMZ 15582	Ga0059261_2504		ribosome silencing factor RsfS/YbeB/iojap	strong	40	99
o	Magnetospirillum magneticum AMB-1	AMB_RS23800		ribosome silencing factor	insig.	44	91
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF4528		Iojap protein	cofit	38	94
	Azospirillum sp. SherDot2	MPMX19_01941		Ribosomal silencing factor RsfS	insig.	41	79
	Ralstonia solanacearum GMI1000	RS_RS11010		ribosome silencing factor	insig.	36	96
	Ralstonia sp. UNC404CL21Col	ABZR87_RS15425		ribosome silencing factor	sig.	36	96
	Herbaspirillum seropedicae SmR1	HSERO_RS17775		hypothetical protein	no data	39	96
	Ralstonia solanacearum PSI07	RPSI07_RS13665		ribosome silencing factor	insig.	36	96
	Variovorax sp. OAS795	ABID97_RS16720		ribosome silencing factor	insig.	37	94
	Variovorax sp. SCN45	GFF299		Ribosomal silencing factor RsfA	cofit	37	94
	Ralstonia solanacearum IBSBF1503	RALBFv3_RS03560		ribosome silencing factor	strong	36	96
	Ralstonia solanacearum UW163	UW163_RS10110		ribosome silencing factor	insig.	36	96
o	Parabacteroides merdae CL09T00C40	HMPREF1078_RS16245		ribosome silencing factor	cofit	39	99
	Paraburkholderia graminis OAS925	ABIE53_001542		ribosome-associated protein	sig.	36	99
	Acidovorax sp. GW101-3H11	Ac3H11_2419		Iojap protein	strong	35	94
o	Bacteroides stercoris CC31F	HMPREF1181_RS09150		ribosome silencing factor	strong	39	99
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04518		ribosome-associated protein	insig.	36	99
	Burkholderia phytofirmans PsJN	BPHYT_RS06390		ribosome-associated protein IOJAP	sig.	35	99
	Paraburkholderia sabiae LMG 24235	QEN71_RS24415		ribosome silencing factor	insig.	34	99
	Cupriavidus basilensis FW507-4G11	RR42_RS04715		ribosome silencing factor RsfS	insig.	36	96
o	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS21000		ribosome silencing factor	strong	39	94
	Bifidobacterium breve UCC2003	BBR_RS14420		ribosome silencing factor	insig.	40	86
	Mycobacterium tuberculosis H37Rv	Rv2420c		Conserved hypothetical protein	no data	38	80
	Desulfovibrio vulgaris Hildenborough JW710	DVU1618		iojap-related protein (TIGR)	no data	36	91
o	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_2428		iojap-like ribosome-associated protein	sig.	33	99
	Synechococcus elongatus PCC 7942	Synpcc7942_0164		Iojap-related protein	strong	37	86
o	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_20060		ribosome silencing factor RsfS	strong	34	94
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS14110		ribosome silencing factor	insig.	36	99
o	Bacteroides ovatus ATCC 8483	BACOVA_04827		iojap-like protein	strong	36	97
o	Bacteroides thetaiotaomicron VPI-5482	BT4008		conserved hypothetical protein (NCBI ptt file)	strong	37	97
o	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS20165		ribosome silencing factor	strong	37	94
	Desulfovibrio vulgaris Miyazaki F	DvMF_0440		iojap-like protein (RefSeq)	strong	34	88