Homologs of PS417_28290 from Pseudomonas simiae WCS417

molecular chaperone DnaK
SEED: C4-type zinc finger protein, DksA/TraR family
KEGG: DnaK suppressor protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_28290 molecular chaperone DnaK no data 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS29955 RNA polymerase-binding protein DksA insig. 92 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29955 RNA polymerase-binding protein DksA insig. 92 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1993 C4-type zinc finger protein, DksA/TraR family insig. 86 99
o Pseudomonas stutzeri RCH2 Psest_0748 RNA polymerase-binding protein DksA no data 72 100
o Pseudomonas aeruginosa MRSN321 DY961_RS25985 dksA;go_function=enzyme RNA polymerase-binding protein DksA sig. 77 100
o Pseudomonas aeruginosa PA14 IKLFDK_25730 RNA polymerase-binding protein DksA no data 77 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS58410 dksA;go_function=enzyme RNA polymerase-binding protein DksA insig. 77 100
o Pseudomonas sp. BP01 JOY50_RS14115 dksA RNA polymerase-binding protein DksA no data 72 100
o Pseudomonas sp. S08-1 OH686_23510 RNA polymerase-binding protein DksA insig. 73 99
o Pseudomonas segetis P6 ACVTMO_RS10135 dksA RNA polymerase-binding protein DksA insig. 72 97
  Pseudomonas putida KT2440 PP_2220 C4-type zinc finger protein, DksA/TraR family sig. 46 99
  Pseudomonas syringae pv. syringae B728a Psyr_3262 dnaK suppressor protein, putative sig. 42 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3262 dnaK suppressor protein, putative no data 42 99
  Pseudomonas fluorescens FW300-N2E3 AO353_21400 conjugal transfer protein TraR strong 43 99
  Pseudomonas sp. BP01 JOY50_RS12615 TraR/DksA C4-type zinc finger protein insig. 45 99
  Pseudomonas sp. SVBP6 COO64_RS19355 TraR/DksA C4-type zinc finger protein insig. 44 99
  Pseudomonas fluorescens SBW25 PFLU_RS12635 conjugal transfer protein TraR insig. 42 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12635 conjugal transfer protein TraR sig. 42 99
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02662 RNA polymerase-binding transcription factor DksA cofit 42 99
  Pseudomonas orientalis W4I3 QF045_RS14635 TraR/DksA C4-type zinc finger protein no data 42 99
  Pseudomonas simiae WCS417 PS417_11900 conjugal transfer protein TraR strong 42 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4288 C4-type zinc finger protein, DksA/TraR family no data 42 99
  Pseudomonas fluorescens FW300-N2C3 AO356_23215 conjugal transfer protein TraR strong 41 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_525 C4-type zinc finger protein, DksA/TraR family strong 41 99
o Castellaniella sp019104865 MT123 ABCV34_RS13420 RNA polymerase-binding protein DksA no data 49 96
  Pseudomonas sp. DMC3 GFF1724 RNA polymerase-binding transcription factor DksA cofit 42 99
  Pseudomonas sp. RS175 PFR28_02414 RNA polymerase-binding transcription factor DksA sig. 40 99
o Serratia liquefaciens MT49 IAI46_09985 RNA polymerase-binding protein DksA insig. 50 99
  Cupriavidus basilensis FW507-4G11 RR42_RS01030 molecular chaperone DnaK no data 47 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS05100 RNA polymerase-binding protein DksA strong 46 96
  Ralstonia solanacearum PSI07 RPSI07_RS23720 RNA polymerase-binding protein DksA strong 47 96
  Herbaspirillum seropedicae SmR1 HSERO_RS00840 molecular chaperone DnaK no data 46 96
  Paraburkholderia graminis OAS925 ABIE53_000423 DnaK suppressor protein strong 47 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS00340 RNA polymerase-binding protein DksA no data 46 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09645 RNA polymerase-binding protein DksA strong 45 96
  Ralstonia solanacearum UW163 UW163_RS03935 RNA polymerase-binding protein DksA insig. 45 96
  Burkholderia phytofirmans PsJN BPHYT_RS01640 molecular chaperone DnaK no data 45 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02205 transcriptional regulator, TraR/DksA family insig. 45 96
  Ralstonia solanacearum GMI1000 RS_RS00230 RNA polymerase-binding protein DksA cofit 44 96
  Acidovorax sp. GW101-3H11 Ac3H11_2002 C4-type zinc finger protein, DksA/TraR family insig. 40 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5427 C4-type zinc finger protein, DksA/TraR family insig. 40 97
  Variovorax sp. OAS795 ABID97_RS06170 RNA polymerase-binding protein DksA no data 41 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF550 C4-type zinc finger protein, DksA/TraR family sig. 40 96
  Variovorax sp. SCN45 GFF4486 DksA family protein PA5536 (no Zn-finger) no data 40 96
  Sinorhizobium meliloti 1021 SMc00469 DnaK suppressor protein no data 46 87
  Agrobacterium fabrum C58 Atu1359 dnaK deletion suppressor protein strong 44 87
  Methylophilus sp. DMC18 GFF2238 RNA polymerase-binding transcription factor DksA no data 43 87
  Rhizobium sp. OAE497 ABIE40_RS10345 RNA polymerase-binding protein DksA strong 45 87
  Magnetospirillum magneticum AMB-1 AMB_RS19350 RNA polymerase-binding protein DksA no data 44 99
  Rhodopseudomonas palustris CGA009 TX73_020255 RNA polymerase-binding protein DksA strong 44 87
  Azospirillum brasilense Sp245 AZOBR_RS11245 molecular chaperone DnaK no data 47 90
  Azospirillum sp. SherDot2 MPMX19_01492 RNA polymerase-binding transcription factor DksA insig. 46 90
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08530 RNA polymerase-binding protein DksA strong 44 81
  Pseudomonas aeruginosa MRSN321 DY961_RS09350 dksA;go_function=enzyme RNA polymerase-binding protein DksA strong 42 87
  Pseudomonas aeruginosa PA14 IKLFDK_30000 RNA polymerase-binding protein DksA strong 42 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS52680 dksA;go_function=enzyme RNA polymerase-binding protein DksA sig. 42 87
  Dechlorosoma suillum PS Dsui_2717 RNA polymerase-binding protein DksA strong 42 87
  Pseudomonas stutzeri RCH2 Psest_1003 RNA polymerase-binding protein DksA no data 40 87
  Pseudomonas sp. S08-1 OH686_17280 RNA polymerase-binding protein DksA no data 39 87
  Dinoroseobacter shibae DFL-12 Dshi_1884 transcriptional regulator, TraR/DksA family (RefSeq) no data 46 88
  Xanthobacter sp. DMC5 GFF1254 RNA polymerase-binding transcription factor DksA no data 44 87
  Pseudomonas segetis P6 ACVTMO_RS06235 dksA RNA polymerase-binding protein DksA no data 40 87
  Caulobacter crescentus NA1000 CCNA_02663 DnaK suppressor protein DksA strong 44 81
  Caulobacter crescentus NA1000 Δfur CCNA_02663 DnaK suppressor protein DksA cofit 44 81
  Phaeobacter inhibens DSM 17395 PGA1_c11040 dnaK suppressor protein DksA strong 44 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1528 C4-type zinc finger protein, DksA/TraR family insig. 40 88
  Rhodospirillum rubrum S1H Rru_A2847 Transcriptional regulators, TraR/DksA family (NCBI) cofit 45 89
  Marinobacter adhaerens HP15 HP15_332 transcriptional regulator, TraR/DksA family no data 39 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04926 RNA polymerase-binding transcription factor DksA strong 38 88
  Bosea sp. OAE506 ABIE41_RS13460 RNA polymerase-binding protein DksA strong 42 87
  Pseudomonas putida KT2440 PP_4693 RNA polymerase-binding transcription factor DksA strong 41 87
  Pseudomonas simiae WCS417 PS417_23875 molecular chaperone DnaK no data 38 88
  Pseudomonas fluorescens FW300-N2C3 AO356_16095 molecular chaperone DnaK strong 37 93
  Pseudomonas fluorescens FW300-N2E3 AO353_14420 molecular chaperone DnaK strong 37 88
  Pseudomonas orientalis W4I3 QF045_RS26135 RNA polymerase-binding protein DksA cofit 38 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2862 C4-type zinc finger protein, DksA/TraR family no data 36 88
  Pseudomonas sp. DMC3 GFF4034 RNA polymerase-binding transcription factor DksA strong 36 93
  Pseudomonas syringae pv. syringae B728a Psyr_0835 transcriptional regulator, TraR/DksA family strong 37 87
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0835 transcriptional regulator, TraR/DksA family strong 37 87
  Pseudomonas sp. RS175 PFR28_03714 RNA polymerase-binding transcription factor DksA strong 38 88
  Pseudomonas fluorescens SBW25 PFLU_RS25715 RNA polymerase-binding protein DksA strong 37 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25715 RNA polymerase-binding protein DksA strong 37 88
  Pseudomonas sp. BP01 JOY50_RS27695 dksA RNA polymerase-binding protein DksA cofit 40 87
  Escherichia coli BL21 ECD_00144 transcriptional regulator of rRNA transcription; DnaK suppressor protein no data 38 88
  Escherichia fergusonii Becca EFB2_03899 RNA polymerase-binding transcription factor DksA strong 38 88
  Escherichia coli ECOR27 NOLOHH_02690 dksA RNA polymerase-binding protein DksA strong 38 88
  Escherichia coli ECOR38 HEPCGN_08295 dksA RNA polymerase-binding protein DksA strong 38 88
  Escherichia coli ECRC100 OKFHMN_10345 dksA RNA polymerase-binding protein DksA strong 38 88
  Escherichia coli ECRC101 MCAODC_00860 dksA RNA polymerase-binding protein DksA strong 38 88
  Escherichia coli ECRC102 NIAGMN_08195 dksA RNA polymerase-binding protein DksA strong 38 88
  Escherichia coli ECRC62 BNILDI_08980 dksA RNA polymerase-binding protein DksA strong 38 88
  Escherichia coli ECRC98 JDDGAC_13940 dksA RNA polymerase-binding protein DksA strong 38 88
  Escherichia coli ECRC99 KEDOAH_17810 dksA RNA polymerase-binding protein DksA no data 38 88
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03517 RNA polymerase-binding transcription factor DksA sig. 38 88
  Escherichia coli Nissle 1917 ECOLIN_RS00800 RNA polymerase-binding protein DksA no data 38 88
  Escherichia coli Nissle 1917 ECOLIN_RS00815 RNA polymerase-binding protein DksA no data 38 88
  Escherichia coli BW25113 b0145 dksA DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) strong 38 88
  Pseudomonas sp. SVBP6 COO64_RS15070 dksA RNA polymerase-binding protein DksA cofit 40 88
  Kangiella aquimarina DSM 16071 B158DRAFT_0056 transcriptional regulator, TraR/DksA family strong 38 87