Homologs of GFF550 from Hydrogenophaga sp. GW460-11-11-14-LB1

C4-type zinc finger protein, DksA/TraR family
SEED: C4-type zinc finger protein, DksA/TraR family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF550 C4-type zinc finger protein, DksA/TraR family sig. 100 100
  Variovorax sp. OAS795 ABID97_RS06170 RNA polymerase-binding protein DksA no data 70 53
  Acidovorax sp. GW101-3H11 Ac3H11_2002 C4-type zinc finger protein, DksA/TraR family insig. 70 51
  Variovorax sp. SCN45 GFF4486 DksA family protein PA5536 (no Zn-finger) no data 68 53
  Burkholderia phytofirmans PsJN BPHYT_RS01640 molecular chaperone DnaK no data 75 36
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02205 transcriptional regulator, TraR/DksA family insig. 75 36
  Paraburkholderia graminis OAS925 ABIE53_000423 DnaK suppressor protein strong 73 36
  Cupriavidus basilensis FW507-4G11 RR42_RS01030 molecular chaperone DnaK no data 73 36
  Paraburkholderia sabiae LMG 24235 QEN71_RS00340 RNA polymerase-binding protein DksA no data 72 36
  Ralstonia solanacearum GMI1000 RS_RS00230 RNA polymerase-binding protein DksA cofit 71 36
  Castellaniella sp019104865 MT123 ABCV34_RS13420 RNA polymerase-binding protein DksA no data 70 37
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09645 RNA polymerase-binding protein DksA strong 71 36
  Ralstonia solanacearum UW163 UW163_RS03935 RNA polymerase-binding protein DksA insig. 71 36
  Herbaspirillum seropedicae SmR1 HSERO_RS00840 molecular chaperone DnaK no data 71 36
  Ralstonia solanacearum PSI07 RPSI07_RS23720 RNA polymerase-binding protein DksA strong 70 36
  Ralstonia sp. UNC404CL21Col ABZR87_RS05100 RNA polymerase-binding protein DksA strong 69 36
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08750 RNA polymerase-binding protein DksA no data 46 42
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02440 RNA polymerase-binding protein DksA strong 54 33
  Rhodanobacter denitrificans MT42 LRK55_RS02195 RNA polymerase-binding protein DksA no data 54 33
  Rhodanobacter sp. FW510-T8 OKGIIK_09500 dksA RNA polymerase-binding protein DksA insig. 54 33
  Rhizobium sp. OAE497 ABIE40_RS10345 RNA polymerase-binding protein DksA strong 56 33
  Lysobacter sp. OAE881 ABIE51_RS13450 RNA polymerase-binding protein DksA no data 52 33
  Phaeobacter inhibens DSM 17395 PGA1_c11040 dnaK suppressor protein DksA strong 56 32
  Agrobacterium fabrum C58 Atu1359 dnaK deletion suppressor protein strong 56 33
  Sinorhizobium meliloti 1021 SMc00469 DnaK suppressor protein no data 53 33
  Azospirillum brasilense Sp245 AZOBR_RS11245 molecular chaperone DnaK no data 57 31
  Caulobacter crescentus NA1000 CCNA_02663 DnaK suppressor protein DksA strong 57 29
  Caulobacter crescentus NA1000 Δfur CCNA_02663 DnaK suppressor protein DksA cofit 57 29
  Magnetospirillum magneticum AMB-1 AMB_RS19350 RNA polymerase-binding protein DksA no data 56 31
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2307.1 C4-type zinc finger protein, DksA/TraR family no data 50 33
  Bosea sp. OAE506 ABIE41_RS13460 RNA polymerase-binding protein DksA strong 52 36
  Azospirillum sp. SherDot2 MPMX19_01492 RNA polymerase-binding transcription factor DksA insig. 55 31
  Dinoroseobacter shibae DFL-12 Dshi_1884 transcriptional regulator, TraR/DksA family (RefSeq) no data 53 32
  Kangiella aquimarina DSM 16071 B158DRAFT_0056 transcriptional regulator, TraR/DksA family strong 48 33
  Rhodospirillum rubrum S1H Rru_A2847 Transcriptional regulators, TraR/DksA family (NCBI) cofit 56 31
  Dechlorosoma suillum PS Dsui_2717 RNA polymerase-binding protein DksA strong 49 32
  Marinobacter adhaerens HP15 HP15_332 transcriptional regulator, TraR/DksA family no data 48 33
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08530 RNA polymerase-binding protein DksA strong 55 30
  Serratia liquefaciens MT49 IAI46_21210 RNA polymerase-binding protein DksA strong 46 33
  Acinetobacter radioresistens SK82 MPMX26_00177 RNA polymerase-binding transcription factor DksA strong 48 32
  Pectobacterium carotovorum WPP14 HER17_RS05580 RNA polymerase-binding protein DksA strong 45 33
  Rhodopseudomonas palustris CGA009 TX73_020255 RNA polymerase-binding protein DksA strong 51 32
  Dickeya dadantii 3937 DDA3937_RS15935 RNA polymerase-binding protein DksA no data 46 33
  Escherichia coli BL21 ECD_00144 transcriptional regulator of rRNA transcription; DnaK suppressor protein no data 45 33
  Escherichia fergusonii Becca EFB2_03899 RNA polymerase-binding transcription factor DksA strong 45 33
  Escherichia coli ECOR27 NOLOHH_02690 dksA RNA polymerase-binding protein DksA no data 45 33
  Escherichia coli ECOR38 HEPCGN_08295 dksA RNA polymerase-binding protein DksA strong 45 33
  Escherichia coli ECRC101 OKFHMN_10345 dksA RNA polymerase-binding protein DksA strong 45 33
  Escherichia coli ECRC101 MCAODC_00860 dksA RNA polymerase-binding protein DksA strong 45 33
  Escherichia coli ECRC102 NIAGMN_08195 dksA RNA polymerase-binding protein DksA strong 45 33
  Escherichia coli ECRC62 BNILDI_08980 dksA RNA polymerase-binding protein DksA insig. 45 33
  Escherichia coli ECRC98 JDDGAC_13940 dksA RNA polymerase-binding protein DksA no data 45 33
  Escherichia coli ECRC99 KEDOAH_17810 dksA RNA polymerase-binding protein DksA no data 45 33
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03517 RNA polymerase-binding transcription factor DksA sig. 45 33
  Escherichia coli Nissle 1917 ECOLIN_RS00800 RNA polymerase-binding protein DksA no data 45 33
  Escherichia coli Nissle 1917 ECOLIN_RS00815 RNA polymerase-binding protein DksA no data 45 33
  Escherichia coli BW25113 b0145 dksA DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) strong 45 33
  Pseudomonas sp. S08-1 OH686_17280 RNA polymerase-binding protein DksA no data 45 33
  Dickeya dianthicola 67-19 HGI48_RS16050 RNA polymerase-binding protein DksA insig. 45 33
  Dickeya dianthicola ME23 DZA65_RS17135 RNA polymerase-binding protein DksA no data 45 33
  Pantoea sp. MT58 IAI47_15635 RNA polymerase-binding protein DksA strong 44 33
  Shewanella amazonensis SB2B Sama_0780 TraR/DksA family transcriptional regulator (RefSeq) strong 44 33
  Rahnella sp. WP5 EX31_RS03250 RNA polymerase-binding protein DksA strong 43 33
  Pseudomonas stutzeri RCH2 Psest_1003 RNA polymerase-binding protein DksA no data 45 32
  Klebsiella michiganensis M5al BWI76_RS05015 transcriptional regulator strong 44 33
  Enterobacter asburiae PDN3 EX28DRAFT_3734 transcriptional regulator, TraR/DksA family no data 43 33
  Enterobacter sp. TBS_079 MPMX20_00831 RNA polymerase-binding transcription factor DksA strong 43 33
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF87 C4-type zinc finger protein, DksA/TraR family insig. 43 33
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1528 C4-type zinc finger protein, DksA/TraR family insig. 45 33
  Alteromonas macleodii MIT1002 MIT1002_03690 DnaK suppressor protein strong 45 32
  Pseudomonas sp. RS175 PFR28_03714 RNA polymerase-binding transcription factor DksA strong 45 33
  Erwinia tracheiphila SCR3 LU632_RS20080 dksA RNA polymerase-binding protein DksA no data 42 33
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0274 transcriptional regulator, TraR/DksA family strong 47 33
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2862 C4-type zinc finger protein, DksA/TraR family no data 44 33
  Pseudomonas fluorescens FW300-N2C3 AO356_16095 molecular chaperone DnaK strong 44 33
  Shewanella loihica PV-4 Shew_3129 TraR/DksA family transcriptional regulator (RefSeq) no data 43 33
  Pseudomonas fluorescens FW300-N2E3 AO353_14420 molecular chaperone DnaK strong 43 33
  Pseudomonas simiae WCS417 PS417_23875 molecular chaperone DnaK no data 44 33
  Vibrio cholerae E7946 ATCC 55056 CSW01_03155 RNA polymerase-binding transcription factor DksA cofit 44 34
  Pseudomonas fluorescens SBW25 PFLU_RS25715 RNA polymerase-binding protein DksA strong 44 33
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25715 RNA polymerase-binding protein DksA strong 44 33
  Pseudomonas syringae pv. syringae B728a Psyr_0835 transcriptional regulator, TraR/DksA family strong 43 33
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0835 transcriptional regulator, TraR/DksA family strong 43 33
  Pseudomonas putida KT2440 PP_4693 RNA polymerase-binding transcription factor DksA strong 42 34
  Shewanella sp. ANA-3 Shewana3_3404 TraR/DksA family transcriptional regulator (RefSeq) sig. 43 33
  Shewanella oneidensis MR-1 SO0874 dksA DnaK suppressor protein (NCBI ptt file) no data 42 33
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5160 C4-type zinc finger protein, DksA/TraR family strong 45 30
  Pseudomonas sp. S08-1 OH686_23510 RNA polymerase-binding protein DksA insig. 40 36
  Pseudomonas stutzeri RCH2 Psest_0748 RNA polymerase-binding protein DksA no data 44 35
  Desulfovibrio vulgaris Miyazaki F DvMF_0008 transcriptional regulator, TraR/DksA family (RefSeq) no data 42 32
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1993 C4-type zinc finger protein, DksA/TraR family insig. 40 35
  Desulfovibrio vulgaris Hildenborough JW710 DVU2150 dksA dnaK suppressor protein, putative (TIGR) sig. 43 32
  Serratia liquefaciens MT49 IAI46_09985 RNA polymerase-binding protein DksA insig. 42 35
  Pseudomonas fluorescens SBW25 PFLU_RS29955 RNA polymerase-binding protein DksA insig. 39 35
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29955 RNA polymerase-binding protein DksA insig. 39 35
  Pseudomonas sp. RS175 PFR28_02414 RNA polymerase-binding transcription factor DksA sig. 37 32
  Pseudomonas fluorescens FW300-N2C3 AO356_23215 conjugal transfer protein TraR strong 37 32
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_525 C4-type zinc finger protein, DksA/TraR family strong 37 32
  Pseudomonas simiae WCS417 PS417_28290 molecular chaperone DnaK no data 40 32
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4288 C4-type zinc finger protein, DksA/TraR family no data 35 32