Homologs of PS417_26870 from Pseudomonas simiae WCS417

5-hydroxymethyluracil DNA glycosylase
SEED: Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
KEGG: formamidopyrimidine-DNA glycosylase

146 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_26870 5-hydroxymethyluracil DNA glycosylase insig. 100 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05511 Formamidopyrimidine-DNA glycosylase cofit 98 100
o Pseudomonas sp. DMC3 GFF239 Formamidopyrimidine-DNA glycosylase insig. 93 100
o Pseudomonas fluorescens FW300-N2E3 AO353_08320 5-hydroxymethyluracil DNA glycosylase insig. 94 100
o Pseudomonas protegens RBAN4 FABNJH_29590 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 92 100
o Pseudomonas fluorescens SBW25 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 97 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 97 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2309 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 93 100
o Pseudomonas sp. RS175 PFR28_04272 Formamidopyrimidine-DNA glycosylase insig. 93 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_979 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 93 100
o Pseudomonas orientalis W4I3 QF045_RS01270 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 97 100
o Pseudomonas sp. SVBP6 COO64_RS12835 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 91 100
o Pseudomonas syringae pv. syringae B728a Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 89 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 89 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4569 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 94 100
o Pseudomonas fluorescens FW300-N2C3 AO356_13270 5-hydroxymethyluracil DNA glycosylase insig. 94 100
o Pseudomonas sp. BP01 JOY50_RS20760 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 93 100
o Pseudomonas putida KT2440 PP_5125 Formamidopyrimidine-DNA glycosylase insig. 93 100
o Pseudomonas aeruginosa PA14 IKLFDK_23650 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 84 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS37540 mutM;go_function=nucleic bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 84 100
o Pseudomonas aeruginosa MRSN321 DY961_RS21755 mutM;go_function=nucleic bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 84 100
o Pseudomonas segetis P6 ACVTMO_RS22040 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 81 100
o Pseudomonas sp. S08-1 OH686_14125 DNA-formamidopyrimidine glycosylase cofit 87 100
o Pseudomonas stutzeri RCH2 Psest_0239 formamidopyrimidine-DNA glycosylase (fpg) insig. 79 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 64 100
o Rhodanobacter sp. FW510-T8 OKGIIK_13060 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 62 100
o Rhodanobacter denitrificans MT42 LRK55_RS10505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 61 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 61 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03605 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 61 100
o Alteromonas macleodii MIT1002 MIT1002_00057 Formamidopyrimidine-DNA glycosylase insig. 60 100
o Lysobacter sp. OAE881 ABIE51_RS00335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 59 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5281.1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 58 100
o Shewanella amazonensis SB2B Sama_0117 formamidopyrimidine-DNA glycosylase (RefSeq) sig. 56 100
o Pantoea sp. MT58 IAI47_00635 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 56 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS00625 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 56 100
o Shewanella loihica PV-4 Shew_3690 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 56 100
o Erwinia tracheiphila SCR3 LU632_RS21975 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Serratia liquefaciens MT49 IAI46_24810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 55 100
o Escherichia coli Nissle 1917 ECOLIN_RS20715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 55 100
o Escherichia coli BL21 ECD_03492 formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase insig. 55 100
o Escherichia coli ECRC62 BNILDI_04000 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 55 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00067 Formamidopyrimidine-DNA glycosylase cofit 55 100
o Escherichia coli BW25113 b3635 mutM formamidopyrimidine-DNA glycosylase (NCBI) insig. 55 100
o Escherichia fergusonii Becca EFB2_00178 Formamidopyrimidine-DNA glycosylase insig. 55 100
o Escherichia coli ECRC100 OKFHMN_15635 Formamidopyrimidine-DNA glycosylase cofit 55 100
o Escherichia coli ECRC101 MCAODC_06145 Formamidopyrimidine-DNA glycosylase insig. 55 100
o Escherichia coli ECRC102 NIAGMN_13395 Formamidopyrimidine-DNA glycosylase insig. 55 100
o Escherichia coli ECRC98 JDDGAC_19260 Formamidopyrimidine-DNA glycosylase insig. 55 100
o Escherichia coli ECRC99 KEDOAH_12515 Formamidopyrimidine-DNA glycosylase no data 55 100
o Escherichia coli ECOR27 NOLOHH_07515 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 55 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_01175 formamidopyrimidine-DNA glycosylase insig. 54 100
o Escherichia coli ECOR38 HEPCGN_14460 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 55 100
o Shewanella oneidensis MR-1 SO4726 mutM formamidopyrimidine-DNA glycosylase (NCBI ptt file) insig. 56 100
o Rahnella sp. WP5 EX31_RS14455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 53 100
o Klebsiella pneumoniae MKP103 KDGMDA_08015 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF374 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 54 100
o Marinobacter adhaerens HP15 HP15_3493 formamidopyrimidine-DNA glycosylase insig. 56 91
o Erwinia amylovora T8 OLJFJH_05810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Klebsiella pneumoniae MRSN742743 KFA93_RS09150 mutM;go_function=nucleic bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Pectobacterium carotovorum WPP14 HER17_RS20815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Dickeya dianthicola 67-19 HGI48_RS00715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 55 100
o Dickeya dianthicola ME23 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase sig. 55 100
o Klebsiella michiganensis M5al BWI76_RS27330 DNA-formamidopyrimidine glycosylase insig. 54 100
o Dickeya dadantii 3937 DDA3937_RS20500 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Enterobacter asburiae PDN3 EX28DRAFT_3885 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 53 100
o Enterobacter sp. TBS_079 MPMX20_00100 Formamidopyrimidine-DNA glycosylase insig. 53 100
o Shewanella sp. ANA-3 Shewana3_4084 formamidopyrimidine-DNA glycosylase (RefSeq) cofit 57 100
o Herbaspirillum seropedicae SmR1 HSERO_RS19545 formamidopyrimidine-DNA glycosylase insig. 53 100
o Paraburkholderia graminis OAS925 ABIE53_000711 formamidopyrimidine-DNA glycosylase insig. 52 100
o Burkholderia phytofirmans PsJN BPHYT_RS02870 formamidopyrimidine-DNA glycosylase insig. 52 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01934 DNA-(apurinic or apyrimidinic site) lyase insig. 52 100
o Cupriavidus basilensis FW507-4G11 RR42_RS02040 formamidopyrimidine-DNA glycosylase insig. 48 100
o Acinetobacter radioresistens SK82 MPMX26_02486 Formamidopyrimidine-DNA glycosylase insig. 51 100
o Methylophilus sp. DMC18 GFF1917 Formamidopyrimidine-DNA glycosylase cofit 50 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0778 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) cofit 50 100
o Ralstonia solanacearum GMI1000 RS_RS01975 formamidopyrimidine-DNA glycosylase insig. 50 100
o Ralstonia solanacearum PSI07 RPSI07_RS22175 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 50 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11125 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 50 100
o Ralstonia solanacearum UW163 UW163_RS02455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 50 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS01720 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Acinetobacter baumannii LAC-4 RR41_RS03325 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 50 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS07015 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase cofit 49 100
o Dechlorosoma suillum PS Dsui_1031 formamidopyrimidine-DNA glycosylase Fpg insig. 47 100
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_07805 Formamidopyrimidine-DNA glycosylase cofit 53 78
o Castellaniella sp019104865 MT123 ABCV34_RS09265 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 47 100
o Variovorax sp. SCN45 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 48 100
o Phaeobacter inhibens DSM 17395 PGA1_c36490 formamidopyrimidine-DNA glycosylase MutM insig. 43 100
o Dinoroseobacter shibae DFL-12 Dshi_3369 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 43 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 44 100
o Variovorax sp. OAS795 ABID97_RS23725 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 48 100
o Azospirillum brasilense Sp245 AZOBR_RS01270 5-hydroxymethyluracil DNA glycosylase insig. 42 100
o Rhodopseudomonas palustris CGA009 TX73_000435 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 41 100
o Sphingobium sp. HT1-2 GFF386 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) cofit 45 100
o Caulobacter crescentus NA1000 CCNA_03822 formamidopyrimidine-DNA glycosylase insig. 41 100
o Caulobacter crescentus NA1000 Δfur CCNA_03822 formamidopyrimidine-DNA glycosylase cofit 41 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3586 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 45 100
o Azospirillum sp. SherDot2 MPMX19_02764 Formamidopyrimidine-DNA glycosylase insig. 42 100
o Xanthobacter sp. DMC5 GFF2040 Formamidopyrimidine-DNA glycosylase insig. 42 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF825 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 43 100
o Rhodospirillum rubrum S1H Rru_A3799 DNA-formamidopyrimidine glycosylase (NCBI) insig. 42 100
o Magnetospirillum magneticum AMB-1 AMB_RS03255 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 43 100
o Sinorhizobium meliloti 1021 SMc01154 formamidopyrimidine-DNA glycosylase insig. 39 100
o Agrobacterium fabrum C58 Atu0321 formamidopyrimidine-DNA glycosylase insig. 40 100
o Rhizobium sp. OAE497 ABIE40_RS01590 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 39 100
o Bosea sp. OAE506 ABIE41_RS04205 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 39 100
  Variovorax sp. SCN45 GFF7985 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) no data 61 53
o Synechococcus elongatus PCC 7942 Synpcc7942_1323 fpg DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 37 100
o Synechocystis sp000284455 PCC 6803 SGL_RS11245 DNA-formamidopyrimidine glycosylase insig. 36 100
o Mycobacterium tuberculosis H37Rv Rv2924c Probable formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA glycosylase) insig. 34 100
  Acidovorax sp. GW101-3H11 Ac3H11_3456 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 47 56
  Desulfovibrio vulgaris Hildenborough JW710 DVU3256 mutM formamidopyrimidine-DNA glycosylase (TIGR) insig. 36 75
  Desulfovibrio vulgaris Miyazaki F DvMF_2449 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 35 74
  Mycobacterium tuberculosis H37Rv Rv3297 Probable endonuclease VIII Nei insig. 28 100
  Mycobacterium tuberculosis H37Rv Rv2464c Possible DNA glycosylase insig. 30 54
  Klebsiella pneumoniae MRSN742743 KFA93_RS01940 nei;go_function=oxidized endonuclease VIII insig. 24 100
  Klebsiella pneumoniae MKP103 KDGMDA_16700 endonuclease VIII insig. 24 100
  Alteromonas macleodii MIT1002 MIT1002_02957 DNA glycosylase/AP lyase Nei insig. 23 100
  Klebsiella michiganensis M5al BWI76_RS08380 endonuclease VIII insig. 26 100
  Escherichia fergusonii Becca EFB2_03389 Endonuclease 8 insig. 26 100
  Escherichia coli Nissle 1917 ECOLIN_RS03820 endonuclease VIII no data 26 100
  Escherichia coli BL21 ECD_00674 endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase insig. 26 100
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03003 Endonuclease 8 insig. 26 100
  Escherichia coli BW25113 b0714 nei endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) insig. 26 100
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4632 Endonuclease VIII insig. 24 100
  Pectobacterium carotovorum WPP14 HER17_RS14965 endonuclease VIII insig. 25 100
  Pantoea sp. MT58 IAI47_13775 endonuclease VIII insig. 25 100
  Mycobacterium tuberculosis H37Rv Rv0944 Possible formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) insig. 31 52
  Erwinia amylovora T8 OLJFJH_16985 endonuclease VIII insig. 27 100
  Escherichia coli ECOR38 HEPCGN_01220 nei endonuclease VIII insig. 25 100
  Escherichia coli ECRC100 OKFHMN_06990 nei endonuclease VIII insig. 24 100
  Escherichia coli ECRC102 NIAGMN_05045 nei endonuclease VIII cofit 24 100
  Escherichia coli ECRC99 KEDOAH_20975 nei endonuclease VIII no data 24 100
  Escherichia coli ECOR27 NOLOHH_23375 nei endonuclease VIII insig. 26 100
  Escherichia coli ECRC62 BNILDI_21370 nei endonuclease VIII insig. 26 100
  Escherichia coli ECRC98 JDDGAC_10645 nei endonuclease VIII insig. 25 100
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS13885 nei endonuclease VIII insig. 25 100
  Serratia liquefaciens MT49 IAI46_06245 endonuclease VIII insig. 26 84
  Enterobacter sp. TBS_079 MPMX20_01348 Endonuclease 8 insig. 24 100
  Marinobacter adhaerens HP15 HP15_4107 endonuclease 8 cofit 27 83
  Enterobacter asburiae PDN3 EX28DRAFT_2273 Formamidopyrimidine-DNA glycosylase insig. 23 100
  Rahnella sp. WP5 EX31_RS23405 endonuclease VIII insig. 25 100
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_07800 hypothetical protein no data 54 18
  Dickeya dadantii 3937 DDA3937_RS06430 endonuclease VIII insig. 23 100
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11980 formamidopyrimidine-DNA glycosylase insig. 25 79
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07525 DNA-formamidopyrimidine glycosylase family protein insig. 32 40
  Desulfovibrio vulgaris Hildenborough JW710 DVU3256 mutM formamidopyrimidine-DNA glycosylase (TIGR) insig. 40 27