Homologs of GFF4486 from Variovorax sp. SCN45

DksA family protein PA5536 (no Zn-finger)
SEED: C4-type zinc finger protein, DksA/TraR family
KEGG: DnaK suppressor protein

158 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4486 DksA family protein PA5536 (no Zn-finger) no data 100 100
  Variovorax sp. OAS795 ABID97_RS06170 RNA polymerase-binding protein DksA no data 92 100
  Acidovorax sp. GW101-3H11 Ac3H11_2002 C4-type zinc finger protein, DksA/TraR family insig. 77 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF550 C4-type zinc finger protein, DksA/TraR family sig. 68 88
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09645 RNA polymerase-binding protein DksA strong 78 60
  Ralstonia solanacearum UW163 UW163_RS03935 RNA polymerase-binding protein DksA insig. 78 60
  Burkholderia phytofirmans PsJN BPHYT_RS01640 molecular chaperone DnaK no data 76 60
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02205 transcriptional regulator, TraR/DksA family insig. 76 60
  Ralstonia solanacearum GMI1000 RS_RS00230 RNA polymerase-binding protein DksA cofit 76 60
  Paraburkholderia graminis OAS925 ABIE53_000423 DnaK suppressor protein strong 75 60
  Cupriavidus basilensis FW507-4G11 RR42_RS01030 molecular chaperone DnaK no data 75 60
  Ralstonia solanacearum PSI07 RPSI07_RS23720 RNA polymerase-binding protein DksA strong 75 60
  Paraburkholderia sabiae LMG 24235 QEN71_RS00340 RNA polymerase-binding protein DksA no data 74 60
  Ralstonia sp. UNC404CL21Col ABZR87_RS05100 RNA polymerase-binding protein DksA strong 74 60
  Castellaniella sp019104865 MT123 ABCV34_RS13420 RNA polymerase-binding protein DksA no data 72 63
  Herbaspirillum seropedicae SmR1 HSERO_RS00840 molecular chaperone DnaK no data 72 60
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08750 RNA polymerase-binding protein DksA no data 56 55
  Agrobacterium fabrum C58 Atu1359 dnaK deletion suppressor protein strong 54 58
  Rhizobium sp. OAE497 ABIE40_RS10345 RNA polymerase-binding protein DksA strong 56 55
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02440 RNA polymerase-binding protein DksA strong 53 56
  Sinorhizobium meliloti 1021 SMc00469 DnaK suppressor protein no data 53 55
  Rhodanobacter denitrificans MT42 LRK55_RS02195 RNA polymerase-binding protein DksA no data 53 56
  Rhodanobacter sp. FW510-T8 OKGIIK_09500 dksA RNA polymerase-binding protein DksA sig. 53 55
  Phaeobacter inhibens DSM 17395 PGA1_c11040 dnaK suppressor protein DksA strong 50 57
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07505 RNA polymerase-binding protein DksA no data 53 55
  Xanthobacter sp. DMC5 GFF1254 RNA polymerase-binding transcription factor DksA no data 51 55
  Caulobacter crescentus NA1000 CCNA_02663 DnaK suppressor protein DksA strong 54 50
  Caulobacter crescentus NA1000 Δfur CCNA_02663 DnaK suppressor protein DksA cofit 54 50
  Lysobacter sp. OAE881 ABIE51_RS13450 RNA polymerase-binding protein DksA no data 49 55
  Bosea sp. OAE506 ABIE41_RS13460 RNA polymerase-binding protein DksA strong 52 59
  Rhodopseudomonas palustris CGA009 TX73_020255 RNA polymerase-binding protein DksA strong 53 54
  Dinoroseobacter shibae DFL-12 Dshi_1884 transcriptional regulator, TraR/DksA family (RefSeq) no data 52 55
  Kangiella aquimarina DSM 16071 B158DRAFT_0056 transcriptional regulator, TraR/DksA family strong 49 54
  Dechlorosoma suillum PS Dsui_2717 RNA polymerase-binding protein DksA strong 50 53
  Alteromonas macleodii MIT1002 MIT1002_03690 DnaK suppressor protein strong 49 54
  Marinobacter adhaerens HP15 HP15_332 transcriptional regulator, TraR/DksA family no data 48 54
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08530 RNA polymerase-binding protein DksA strong 55 49
  Azospirillum brasilense Sp245 AZOBR_RS11245 molecular chaperone DnaK no data 54 52
  Magnetospirillum magneticum AMB-1 AMB_RS19350 RNA polymerase-binding protein DksA no data 53 52
  Rhodospirillum rubrum S1H Rru_A2847 Transcriptional regulators, TraR/DksA family (NCBI) cofit 56 52
  Sphingobium sp. HT1-2 GFF2254 DksA family protein PA5536 (no Zn-finger) strong 48 55
  Pseudomonas stutzeri RCH2 Psest_1003 RNA polymerase-binding protein DksA no data 47 54
  Shewanella amazonensis SB2B Sama_0780 TraR/DksA family transcriptional regulator (RefSeq) strong 46 54
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2307.1 C4-type zinc finger protein, DksA/TraR family no data 48 55
  Dickeya dianthicola 67-19 HGI48_RS16050 RNA polymerase-binding protein DksA insig. 46 54
  Dickeya dianthicola ME23 DZA65_RS17135 RNA polymerase-binding protein DksA no data 46 54
  Pseudomonas aeruginosa MRSN321 DY961_RS09350 dksA;go_function=enzyme RNA polymerase-binding protein DksA strong 46 54
  Pseudomonas aeruginosa PA14 IKLFDK_30000 RNA polymerase-binding protein DksA strong 46 54
  Pseudomonas aeruginosa PUPa3 DQ20_RS52680 dksA;go_function=enzyme RNA polymerase-binding protein DksA sig. 46 54
  Shewanella oneidensis MR-1 SO0874 dksA DnaK suppressor protein (NCBI ptt file) no data 46 54
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13365 RNA polymerase-binding protein DksA strong 43 62
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0274 transcriptional regulator, TraR/DksA family strong 45 61
  Pantoea sp. MT58 IAI47_15635 RNA polymerase-binding protein DksA strong 45 54
  Escherichia coli BL21 ECD_00144 transcriptional regulator of rRNA transcription; DnaK suppressor protein no data 45 54
  Escherichia fergusonii Becca EFB2_03899 RNA polymerase-binding transcription factor DksA strong 45 54
  Escherichia coli ECOR27 NOLOHH_02690 dksA RNA polymerase-binding protein DksA strong 45 54
  Escherichia coli ECOR38 HEPCGN_08295 dksA RNA polymerase-binding protein DksA strong 45 54
  Escherichia coli ECRC100 OKFHMN_10345 dksA RNA polymerase-binding protein DksA strong 45 54
  Escherichia coli ECRC101 MCAODC_00860 dksA RNA polymerase-binding protein DksA strong 45 54
  Escherichia coli ECRC102 NIAGMN_08195 dksA RNA polymerase-binding protein DksA strong 45 54
  Escherichia coli ECRC62 BNILDI_08980 dksA RNA polymerase-binding protein DksA strong 45 54
  Escherichia coli ECRC98 JDDGAC_13940 dksA RNA polymerase-binding protein DksA strong 45 54
  Escherichia coli ECRC99 KEDOAH_17810 dksA RNA polymerase-binding protein DksA no data 45 54
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03517 RNA polymerase-binding transcription factor DksA sig. 45 54
  Escherichia coli Nissle 1917 ECOLIN_RS00800 RNA polymerase-binding protein DksA no data 45 54
  Escherichia coli Nissle 1917 ECOLIN_RS00815 RNA polymerase-binding protein DksA no data 45 54
  Escherichia coli BW25113 b0145 dksA DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) strong 45 54
  Serratia liquefaciens MT49 IAI46_21210 RNA polymerase-binding protein DksA strong 45 54
  Rahnella sp. WP5 EX31_RS03250 RNA polymerase-binding protein DksA strong 45 54
  Dickeya dadantii 3937 DDA3937_RS15935 RNA polymerase-binding protein DksA no data 45 54
  Klebsiella pneumoniae MKP103 KDGMDA_13270 RNA polymerase-binding protein DksA no data 45 54
  Klebsiella pneumoniae MRSN742743 KFA93_RS11715 dksA;inference=COORDINATES RNA polymerase-binding protein DksA strong 45 54
  Pseudomonas sp. S08-1 OH686_17280 RNA polymerase-binding protein DksA no data 46 54
  Shewanella sp. ANA-3 Shewana3_3404 TraR/DksA family transcriptional regulator (RefSeq) sig. 45 54
  Azospirillum sp. SherDot2 MPMX19_01492 RNA polymerase-binding transcription factor DksA insig. 53 52
  Acinetobacter radioresistens SK82 MPMX26_00177 RNA polymerase-binding transcription factor DksA strong 48 54
  Shewanella loihica PV-4 Shew_3129 TraR/DksA family transcriptional regulator (RefSeq) no data 45 54
  Enterobacter asburiae PDN3 EX28DRAFT_3734 transcriptional regulator, TraR/DksA family no data 44 54
  Enterobacter sp. TBS_079 MPMX20_00831 RNA polymerase-binding transcription factor DksA strong 44 54
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF87 C4-type zinc finger protein, DksA/TraR family insig. 44 54
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1528 C4-type zinc finger protein, DksA/TraR family insig. 46 54
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_15060 dksA RNA polymerase-binding protein DksA no data 44 54
  Erwinia tracheiphila SCR3 LU632_RS20080 dksA RNA polymerase-binding protein DksA no data 44 54
  Pectobacterium carotovorum WPP14 HER17_RS05580 RNA polymerase-binding protein DksA strong 44 54
  Klebsiella michiganensis M5al BWI76_RS05015 transcriptional regulator strong 42 62
  Pseudomonas segetis P6 ACVTMO_RS06235 dksA RNA polymerase-binding protein DksA no data 46 54
  Acinetobacter baumannii LAC-4 RR41_RS17730 RNA polymerase-binding protein DksA no data 47 54
  Methylophilus sp. DMC18 GFF2238 RNA polymerase-binding transcription factor DksA no data 45 53
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04926 RNA polymerase-binding transcription factor DksA strong 45 54
  Erwinia amylovora T8 OLJFJH_00765 RNA polymerase-binding protein DksA no data 43 54
  Pseudomonas fluorescens FW300-N2E3 AO353_14420 molecular chaperone DnaK strong 43 54
  Pseudomonas sp. DMC3 GFF4034 RNA polymerase-binding transcription factor DksA strong 45 54
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2862 C4-type zinc finger protein, DksA/TraR family no data 43 54
  Pseudomonas stutzeri RCH2 Psest_0748 RNA polymerase-binding protein DksA no data 47 58
  Pseudomonas fluorescens FW300-N2C3 AO356_16095 molecular chaperone DnaK strong 43 54
  Pseudomonas fluorescens SBW25 PFLU_RS25715 RNA polymerase-binding protein DksA strong 43 54
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25715 RNA polymerase-binding protein DksA strong 43 54
  Pseudomonas sp. RS175 PFR28_03714 RNA polymerase-binding transcription factor DksA strong 43 54
  Pseudomonas sp. BP01 JOY50_RS27695 dksA RNA polymerase-binding protein DksA cofit 45 54
  Pseudomonas orientalis W4I3 QF045_RS26135 RNA polymerase-binding protein DksA cofit 44 54
  Pseudomonas simiae WCS417 PS417_23875 molecular chaperone DnaK no data 44 54
  Vibrio cholerae E7946 ATCC 55056 CSW01_03155 RNA polymerase-binding transcription factor DksA cofit 44 55
  Pseudomonas syringae pv. syringae B728a Psyr_0835 transcriptional regulator, TraR/DksA family strong 43 54
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0835 transcriptional regulator, TraR/DksA family strong 43 54
  Pseudomonas sp. SVBP6 COO64_RS15070 dksA RNA polymerase-binding protein DksA cofit 43 54
  Pseudomonas sp. S08-1 OH686_23510 RNA polymerase-binding protein DksA insig. 45 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5160 C4-type zinc finger protein, DksA/TraR family strong 44 50
  Pseudomonas putida KT2440 PP_4693 RNA polymerase-binding transcription factor DksA strong 44 54
  Serratia liquefaciens MT49 IAI46_09985 RNA polymerase-binding protein DksA insig. 43 58
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1993 C4-type zinc finger protein, DksA/TraR family insig. 42 58
  Pseudomonas aeruginosa MRSN321 DY961_RS25985 dksA;go_function=enzyme RNA polymerase-binding protein DksA sig. 44 58
  Pseudomonas aeruginosa PA14 IKLFDK_25730 RNA polymerase-binding protein DksA no data 44 58
  Pseudomonas aeruginosa PUPa3 DQ20_RS58410 dksA;go_function=enzyme RNA polymerase-binding protein DksA insig. 44 58
  Desulfovibrio vulgaris Hildenborough JW710 DVU2150 dksA dnaK suppressor protein, putative (TIGR) sig. 43 54
  Pseudomonas sp. BP01 JOY50_RS14115 dksA RNA polymerase-binding protein DksA no data 41 58
  Pseudomonas segetis P6 ACVTMO_RS10135 dksA RNA polymerase-binding protein DksA insig. 42 59
  Desulfovibrio vulgaris Miyazaki F DvMF_0008 transcriptional regulator, TraR/DksA family (RefSeq) no data 41 54
  Pseudomonas sp. RS175 PFR28_02414 RNA polymerase-binding transcription factor DksA sig. 39 54
  Pseudomonas fluorescens FW300-N2C3 AO356_23215 conjugal transfer protein TraR strong 37 56
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_525 C4-type zinc finger protein, DksA/TraR family strong 37 56
  Pseudomonas fluorescens SBW25 PFLU_RS29955 RNA polymerase-binding protein DksA insig. 41 58
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29955 RNA polymerase-binding protein DksA insig. 41 58
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5427 C4-type zinc finger protein, DksA/TraR family insig. 36 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4288 C4-type zinc finger protein, DksA/TraR family no data 38 54
  Pseudomonas sp. DMC3 GFF1724 RNA polymerase-binding transcription factor DksA cofit 38 54
  Pseudomonas fluorescens FW300-N2E3 AO353_21400 conjugal transfer protein TraR strong 36 56
  Pseudomonas fluorescens SBW25 PFLU_RS12635 conjugal transfer protein TraR insig. 36 56
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12635 conjugal transfer protein TraR sig. 36 56
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02662 RNA polymerase-binding transcription factor DksA cofit 36 56
  Pseudomonas orientalis W4I3 QF045_RS14635 TraR/DksA C4-type zinc finger protein no data 36 56
  Pseudomonas simiae WCS417 PS417_11900 conjugal transfer protein TraR strong 36 56
  Pseudomonas sp. SVBP6 COO64_RS19355 TraR/DksA C4-type zinc finger protein insig. 37 56
  Pseudomonas syringae pv. syringae B728a Psyr_3262 dnaK suppressor protein, putative sig. 38 56
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3262 dnaK suppressor protein, putative no data 38 56
  Pseudomonas sp. BP01 JOY50_RS12615 TraR/DksA C4-type zinc finger protein insig. 39 54
  Pseudomonas putida KT2440 PP_2220 C4-type zinc finger protein, DksA/TraR family sig. 38 54
  Pseudomonas simiae WCS417 PS417_28290 molecular chaperone DnaK no data 39 53
  Desulfovibrio vulgaris Miyazaki F DvMF_2168 transcriptional regulator, TraR/DksA family (RefSeq) insig. 30 50
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17490 molecular chaperone DnaK no data 42 29
  Desulfovibrio vulgaris Hildenborough JW710 DVU0878 dnaK suppressor protein, putative (TIGR) insig. 40 21
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15020 TraR/DksA C4-type zinc finger protein insig. 36 30
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08290 TraR/DksA C4-type zinc finger protein insig. 38 29
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14970 TraR/DksA C4-type zinc finger protein no data 42 29
  Desulfovibrio vulgaris Miyazaki F DvMF_1239 transcriptional regulator, TraR/DksA family (RefSeq) insig. 40 21
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07990 conjugal transfer protein TraR insig. 36 29
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06455 transcriptional regulator, TraR/DksA family insig. 27 49
  Rhodanobacter denitrificans MT42 LRK55_RS07740 TraR/DksA family transcriptional regulator insig. 36 29
  Bacteroides ovatus ATCC 8483 BACOVA_02541 putative RNA polymerase-binding protein DksA strong 33 42
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19205 TraR/DksA C4-type zinc finger protein strong 41 22
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0717 DnaK suppressor protein strong 32 50
  Burkholderia phytofirmans PsJN BPHYT_RS30700 conjugal transfer protein TraR insig. 44 20
  Acidovorax sp. GW101-3H11 Ac3H11_819 transcriptional regulators, TraR/DksA family insig. 34 33
  Bacteroides stercoris CC31F HMPREF1181_RS14620 TraR/DksA C4-type zinc finger protein strong 42 24
  Bacteroides thetaiotaomicron VPI-5482 BT0807 DnaK suppressor protein, putative (NCBI ptt file) no data 42 24
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01665 TraR/DksA C4-type zinc finger protein strong 33 42
  Phocaeicola dorei CL03T12C01 ABI39_RS15400 TraR/DksA C4-type zinc finger protein strong 33 42
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02235 conjugal transfer protein TraR insig. 38 25
  Ralstonia solanacearum UW163 UW163_RS15545 conjugal transfer protein TraR insig. 38 25