Homologs of GFF4084 from Sphingobium sp. HT1-2

UPF0126 inner membrane protein CC_3680
SEED: YghA protein

146 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF4084 UPF0126 inner membrane protein CC_3680 cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1348 Predicted membrane protein strong 65 96
o Caulobacter crescentus NA1000 CCNA_03794 hypothetical protein strong 51 93
o Caulobacter crescentus NA1000 Δfur CCNA_03794 hypothetical protein cofit 51 93
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11875 trimeric intracellular cation channel family protein insig. 53 91
o Sinorhizobium meliloti 1021 SMc00330 transmembrane protein insig. 45 92
o Agrobacterium fabrum C58 Atu0154 hypothetical protein insig. 43 90
o Rhodospirillum rubrum S1H Rru_A0991 Protein of unknown function UPF0126 (NCBI) insig. 40 98
o Rhizobium sp. OAE497 ABIE40_RS00395 trimeric intracellular cation channel family protein insig. 42 92
o Bosea sp. OAE506 ABIE41_RS00215 trimeric intracellular cation channel family protein insig. 43 88
o Shewanella oneidensis MR-1 SO3342 putative transporter, required for L-alanine utilization (from data) strong 35 92
o Shewanella amazonensis SB2B Sama_0852 hypothetical protein (RefSeq) insig. 41 89
o Shewanella sp. ANA-3 Shewana3_1204 putative transporter, required for glycine and L-alanine utilization (from data) strong 34 92
  Shewanella oneidensis MR-1 SO1319 putative transporter, required for glycine utilization (from data) strong 39 89
o Shewanella loihica PV-4 Shew_1024 hypothetical protein (RefSeq) insig. 39 89
  Shewanella sp. ANA-3 Shewana3_3055 hypothetical protein (RefSeq) insig. 39 89
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1200 Predicted membrane protein strong 35 88
o Enterobacter sp. TBS_079 MPMX20_00843 hypothetical protein sig. 40 89
o Phaeobacter inhibens DSM 17395 PGA1_c00920 putative transporter, required for glycine utilization (from data) strong 40 92
  Enterobacter asburiae PDN3 EX28DRAFT_3746 Predicted membrane protein cofit 38 89
  Erwinia amylovora T8 OLJFJH_05580 UPF0126 membrane protein insig. 36 92
  Xanthobacter sp. DMC5 GFF643 hypothetical protein insig. 37 84
  Bacteroides ovatus ATCC 8483 BACOVA_03975 hypothetical protein sig. 34 93
  Dechlorosoma suillum PS Dsui_0014 putative membrane protein strong 36 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_12060 hypothetical protein insig. 40 92
  Pseudomonas sp. S08-1 OH686_01605 UPF0126 inner membrane protein YadS insig. 35 89
  Vibrio cholerae E7946 ATCC 55056 CSW01_10555 hypothetical protein insig. 34 93
  Castellaniella sp019104865 MT123 ABCV34_RS03090 trimeric intracellular cation channel family protein insig. 39 90
  Pantoea sp. MT58 IAI47_00530 trimeric intracellular cation channel family protein insig. 35 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06085 hypothetical protein strong 31 90
  Dickeya dadantii 3937 DDA3937_RS10315 trimeric intracellular cation channel family protein insig. 33 93
  Dickeya dianthicola ME23 DZA65_RS10800 trimeric intracellular cation channel family protein insig. 33 93
  Azospirillum sp. SherDot2 MPMX19_04399 hypothetical protein insig. 37 94
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18815 trimeric intracellular cation channel family protein cofit 35 92
  Bacteroides thetaiotaomicron VPI-5482 BT1201 conserved hypothetical protein (NCBI ptt file) strong 32 93
  Bacteroides stercoris CC31F HMPREF1181_RS16955 trimeric intracellular cation channel family protein cofit 33 93
  Dickeya dianthicola 67-19 HGI48_RS10325 trimeric intracellular cation channel family protein insig. 33 93
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4770.1 FIG01211391: hypothetical protein insig. 35 93
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00405 trimeric intracellular cation channel family protein insig. 41 91
  Enterobacter asburiae PDN3 EX28DRAFT_3895 Predicted membrane protein insig. 34 93
  Pseudomonas segetis P6 ACVTMO_RS12450 trimeric intracellular cation channel family protein insig. 34 90
  Phocaeicola dorei CL03T12C01 ABI39_RS17455 trimeric intracellular cation channel family protein cofit 33 91
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03765 trimeric intracellular cation channel family protein strong 33 91
  Klebsiella michiganensis M5al BWI76_RS27405 membrane protein insig. 34 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS16075 trimeric intracellular cation channel family protein strong 36 93
  Klebsiella pneumoniae MKP103 KDGMDA_08105 UPF0126 inner membrane protein YicG insig. 34 93
  Klebsiella pneumoniae MRSN742743 KFA93_RS09055 trimeric intracellular cation channel family protein insig. 34 93
  Pseudomonas aeruginosa MRSN321 DY961_RS07275 trimeric intracellular cation channel family protein insig. 34 91
  Pseudomonas aeruginosa PA14 IKLFDK_04740 UPF0126 membrane protein Cj0593c insig. 34 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS45510 trimeric intracellular cation channel family protein insig. 34 91
  Klebsiella michiganensis M5al BWI76_RS05160 hypothetical protein sig. 40 89
  Desulfovibrio vulgaris Hildenborough JW710 DVU2672 glycine transporter (from data) strong 38 70
  Azospirillum brasilense Sp245 AZOBR_RS19810 membrane protein insig. 34 93
  Ralstonia solanacearum PSI07 RPSI07_RS13175 trimeric intracellular cation channel family protein cofit 35 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15435 glycine transporter (from data) strong 29 93
  Rhodopseudomonas palustris CGA009 TX73_015510 trimeric intracellular cation channel family protein insig. 43 92
  Pseudomonas orientalis W4I3 QF045_RS05515 trimeric intracellular cation channel family protein cofit 32 91
  Klebsiella pneumoniae MKP103 KDGMDA_13405 UPF0126 membrane protein VC_2382 insig. 45 68
  Klebsiella pneumoniae MRSN742743 KFA93_RS11865 TRIC cation channel family protein insig. 45 68
  Ralstonia solanacearum GMI1000 RS_RS11765 trimeric intracellular cation channel family protein insig. 36 90
  Dechlorosoma suillum PS Dsui_2676 putative membrane protein insig. 39 93
  Serratia liquefaciens MT49 IAI46_03565 TRIC cation channel family protein insig. 38 89
  Escherichia coli ECRC100 OKFHMN_10275 yadS UPF0126 inner membrane protein YadS cofit 37 89
  Escherichia coli ECRC101 MCAODC_00790 yadS UPF0126 inner membrane protein YadS insig. 37 89
  Escherichia coli ECRC102 NIAGMN_08125 yadS UPF0126 inner membrane protein YadS insig. 37 89
  Escherichia coli ECRC98 JDDGAC_13870 yadS UPF0126 inner membrane protein YadS insig. 37 89
  Pseudomonas fluorescens SBW25 PFLU_RS02535 trimeric intracellular cation channel family protein insig. 32 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02535 trimeric intracellular cation channel family protein strong 32 91
  Pseudomonas simiae WCS417 PS417_02455 putative transporter, required for glycine utilization (from data) strong 32 91
  Pectobacterium carotovorum WPP14 HER17_RS11080 trimeric intracellular cation channel family protein cofit 32 92
  Escherichia coli BL21 ECD_00156 UPF0126 family inner membrane protein insig. 38 89
  Escherichia fergusonii Becca EFB2_03887 hypothetical protein insig. 38 89
  Escherichia coli ECOR27 NOLOHH_02620 yadS UPF0126 inner membrane protein YadS insig. 38 89
  Escherichia coli ECOR38 HEPCGN_08225 yadS UPF0126 inner membrane protein YadS insig. 38 89
  Escherichia coli ECRC62 BNILDI_09050 yadS UPF0126 inner membrane protein YadS insig. 38 89
  Escherichia coli ECRC99 KEDOAH_17880 yadS UPF0126 inner membrane protein YadS no data 38 89
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03505 hypothetical protein insig. 38 89
  Escherichia coli Nissle 1917 ECOLIN_RS00875 TRIC cation channel family protein insig. 38 89
  Escherichia coli BW25113 b0157 yadS conserved inner membrane protein (NCBI) sig. 38 89
  Marinobacter adhaerens HP15 HP15_2547 membrane protein containing uncharacterized protein family UPF0126 domains insig. 34 72
  Acinetobacter baumannii LAC-4 RR41_RS17940 trimeric intracellular cation channel family protein insig. 33 85
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF64 Putative inner membrane protein insig. 38 89
  Acinetobacter radioresistens SK82 MPMX26_00138 hypothetical protein strong 32 86
  Shewanella amazonensis SB2B Sama_2463 hypothetical protein (RefSeq) sig. 38 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00729 hypothetical protein cofit 32 91
  Acidovorax sp. GW101-3H11 Ac3H11_3909 Putative membrane protein no data 35 90
  Shewanella loihica PV-4 Shew_1154 hypothetical protein (RefSeq) insig. 33 89
  Rhodanobacter sp. FW510-T8 OKGIIK_14815 putative membrane protein insig. 39 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF679 Putative membrane protein insig. 32 90
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04175 trimeric intracellular cation channel family protein insig. 35 82
  Ralstonia solanacearum UW163 UW163_RS09495 trimeric intracellular cation channel family protein insig. 35 82
  Pseudomonas stutzeri RCH2 Psest_1636 putative transporter, required for glycine utilization (from data) strong 32 92
  Rahnella sp. WP5 EX31_RS15790 trimeric intracellular cation channel family protein insig. 31 92
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS05500 trimeric intracellular cation channel family protein insig. 38 90
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF362 Putative inner membrane protein insig. 32 84
  Rhodanobacter sp. FW510-T8 OKGIIK_06540 Trimeric intracellular cation channel family protein insig. 36 89
  Burkholderia phytofirmans PsJN BPHYT_RS05060 membrane protein sig. 32 90
  Pseudomonas sp. BP01 JOY50_RS17195 trimeric intracellular cation channel family protein insig. 34 93
  Pseudomonas putida KT2440 PP_4901 conserved inner membrane protein strong 34 93
  Pseudomonas syringae pv. syringae B728a Psyr_0565 Protein of unknown function UPF0126 strong 33 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0565 Protein of unknown function UPF0126 strong 33 93
  Serratia liquefaciens MT49 IAI46_24875 trimeric intracellular cation channel family protein insig. 32 92
  Cellulophaga baltica 18 M666_RS11265 trimeric intracellular cation channel family protein sig. 30 92
  Alteromonas macleodii MIT1002 MIT1002_04042 putative membrane protein insig. 34 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_161 putative transporter, required for glycine utilization (from data) strong 35 76
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04215 trimeric intracellular cation channel family protein insig. 36 91
  Variovorax sp. OAS795 ABID97_RS11750 trimeric intracellular cation channel family protein insig. 33 86
  Escherichia coli BL21 ECD_03503 UPF0126 family inner membrane protein insig. 33 84
  Escherichia fergusonii Becca EFB2_00142 hypothetical protein insig. 33 84
  Escherichia coli ECOR27 NOLOHH_07455 yicG UPF0126 inner membrane protein YicG insig. 33 84
  Escherichia coli ECOR38 HEPCGN_14395 yicG UPF0126 inner membrane protein YicG insig. 33 84
  Escherichia coli ECRC100 OKFHMN_15575 yicG UPF0126 inner membrane protein YicG cofit 33 84
  Escherichia coli ECRC101 MCAODC_06085 yicG UPF0126 inner membrane protein YicG insig. 33 84
  Escherichia coli ECRC102 NIAGMN_13335 yicG UPF0126 inner membrane protein YicG cofit 33 84
  Escherichia coli ECRC62 BNILDI_04060 yicG UPF0126 inner membrane protein YicG insig. 33 84
  Escherichia coli ECRC98 JDDGAC_19200 yicG UPF0126 inner membrane protein YicG insig. 33 84
  Escherichia coli ECRC99 KEDOAH_12570 yicG UPF0126 inner membrane protein YicG no data 33 84
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00055 hypothetical protein insig. 33 84
  Escherichia coli Nissle 1917 ECOLIN_RS20770 trimeric intracellular cation channel family protein insig. 33 84
  Escherichia coli BW25113 b3646 yicG orf, hypothetical protein (VIMSS) sig. 33 84
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08780 trimeric intracellular cation channel family protein insig. 32 71
  Paraburkholderia sabiae LMG 24235 QEN71_RS03365 trimeric intracellular cation channel family protein insig. 32 96
  Enterobacter sp. TBS_079 MPMX20_00090 hypothetical protein insig. 33 75
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00171 Uncharacterized membrane protein YeiH insig. 32 90
  Pseudomonas fluorescens FW300-N2E3 AO353_13110 putative transporter, required for glycine utilization (from data) strong 33 93
  Pseudomonas fluorescens FW300-N2C3 AO356_08690 hypothetical protein insig. 33 93
  Cupriavidus basilensis FW507-4G11 RR42_RS04305 membrane protein insig. 30 91
  Pseudomonas sp. RS175 PFR28_05114 hypothetical protein insig. 33 93
  Cupriavidus basilensis FW507-4G11 RR42_RS30380 membrane protein insig. 36 90
  Rhodanobacter denitrificans MT42 LRK55_RS11055 trimeric intracellular cation channel family protein insig. 35 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11325 trimeric intracellular cation channel family protein insig. 35 93
  Alteromonas macleodii MIT1002 MIT1002_01312 putative membrane protein insig. 34 77
  Paraburkholderia graminis OAS925 ABIE53_001283 putative membrane protein YeiH strong 33 84
  Herbaspirillum seropedicae SmR1 HSERO_RS02545 membrane protein insig. 31 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1419 putative membrane protein sig. 34 77
  Pseudomonas sp. SVBP6 COO64_RS17865 trimeric intracellular cation channel family protein insig. 35 67
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3621 putative transporter, required for glycine utilization (from data) strong 33 93
  Pseudomonas sp. DMC3 GFF3208 hypothetical protein insig. 34 79
  Cupriavidus basilensis FW507-4G11 RR42_RS33360 membrane protein sig. 39 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS21860 TRIC cation channel family protein insig. 37 92
  Magnetospirillum magneticum AMB-1 AMB_RS09810 hypothetical protein insig. 34 71
  Dinoroseobacter shibae DFL-12 Dshi_0905 protein of unknown function UPF0126 (RefSeq) no data 35 57
  Burkholderia phytofirmans PsJN BPHYT_RS08720 membrane protein insig. 36 92
  Methanococcus maripaludis S2 MMP_RS01980 trimeric intracellular cation channel family protein strong 27 92
  Methanococcus maripaludis JJ MMJJ_RS03505 trimeric intracellular cation channel family protein insig. 26 92
  Bifidobacterium breve UCC2003 BBR_RS15220 trimeric intracellular cation channel family protein sig. 30 72