| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sphingobium sp. HT1-2 | GFF108 | | S-adenosylmethionine:diacylgycerolhomoserine-N- methyltransferase, BtaB protein | cofit | 100 | 100 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1990 | | Methyltransferase domain | insig. | 63 | 98 |
| o | Bosea sp. OAE506 | ABIE41_RS12765 | | class I SAM-dependent methyltransferase | no data | 57 | 93 |
| o | Sinorhizobium meliloti 1021 | SMc01847 | | methyltransferase | sig. | 52 | 96 |
| o | Rhizobium sp. OAE497 | ABIE40_RS11935 | | class I SAM-dependent methyltransferase | insig. | 53 | 94 |
| o | Rhodopseudomonas palustris CGA009 | TX73_003755 | | class I SAM-dependent methyltransferase | insig. | 51 | 95 |
| o | Agrobacterium fabrum C58 | Atu2120 | | O-methyltransferase | insig. | 50 | 94 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS06315 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | sig. | 25 | 79 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05067 | | ubiquinone/menaquinone biosynthesis methyltransferase | strong | 25 | 93 |
| | Bosea sp. OAE506 | ABIE41_RS12470 | | metalloregulator ArsR/SmtB family transcription factor | insig. | 39 | 53 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS03125 | | class I SAM-dependent methyltransferase | insig. | 33 | 66 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS14205 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | insig. | 28 | 66 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4216 | | ubiquinone/menaquinone biosynthesis methyltransferase (NCBI ptt file) | no data | 26 | 67 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15820 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 26 | 66 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS07920 | | metalloregulator ArsR/SmtB family transcription factor | strong | 37 | 52 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c29610 | | phosphatidylethanolamine N-methyltransferase PmtA | strong | 30 | 69 |
| | Rhodopseudomonas palustris CGA009 | TX73_006705 | | class I SAM-dependent methyltransferase | no data | 36 | 63 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_00450 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 26 | 70 |
| | Xanthobacter sp. DMC5 | GFF4453 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 29 | 73 |
| | Bosea sp. OAE506 | ABIE41_RS10850 | | class I SAM-dependent methyltransferase | no data | 30 | 81 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS15120 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 26 | 66 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0744 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 31 | 57 |
| | Agrobacterium fabrum C58 | Atu2124 | | transcriptional regulator, ArsR family | sig. | 33 | 51 |
| | Rhizobium sp. OAE497 | ABIE40_RS11955 | | metalloregulator ArsR/SmtB family transcription factor | sig. | 33 | 51 |
| | Lysobacter sp. OAE881 | ABIE51_RS14385 | | methyltransferase domain-containing protein | no data | 32 | 56 |
| | Rhizobium sp. OAE497 | ABIE40_RS01585 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 62 |
| | Marinobacter adhaerens HP15 | HP15_1745 | | methyltransferase type 11 | cofit | 29 | 61 |
| | Sphingobium sp. HT1-2 | GFF5206 | | Methyltransferase Sare_0198 | insig. | 29 | 93 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1255 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 30 | 55 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_19955 | | SAM-dependent methyltransferase | insig. | 28 | 57 |
| | Xanthobacter sp. DMC5 | GFF4148 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 37 | 52 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 26 | 82 |
| | Pseudomonas sp. S08-1 | OH686_09385 | | SAM-dependent methyltransferase (UbiE paralog) | insig. | 35 | 60 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1822 | | ubiquinone/menaquinone biosynthesis methyltransferases | strong | 29 | 66 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS16755 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | strong | 23 | 75 |
| | Caulobacter crescentus NA1000 | CCNA_01388 | | methyltransferase | sig. | 32 | 61 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01388 | | methyltransferase | cofit | 32 | 61 |
| | Lysobacter sp. OAE881 | ABIE51_RS16455 | | class I SAM-dependent methyltransferase | insig. | 26 | 80 |
| | Dickeya dianthicola 67-19 | HGI48_RS02395 | | trans-aconitate 2-methyltransferase | insig. | 28 | 55 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS12670 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | strong | 23 | 75 |
| | Rhodospirillum rubrum S1H | Rru_A1529 | | Transcriptional Regulator, ArsR family (NCBI) | cofit | 31 | 72 |
| | Azospirillum sp. SherDot2 | MPMX19_05980 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 30 | 66 |
| | Pseudomonas sp. S08-1 | OH686_20725 | | SAM-dependent methyltransferase | insig. | 29 | 68 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS20665 | | class I SAM-dependent methyltransferase | cofit | 28 | 72 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c36480 | | ubiquinone/menaquinone biosynthesis methyltransferase UbiE | no data | 26 | 79 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3368 | | ubiquinone/menaquinone biosynthesis methyltransferase (RefSeq) | no data | 26 | 69 |
| | Rhodopseudomonas palustris CGA009 | TX73_020565 | | class I SAM-dependent methyltransferase | insig. | 30 | 51 |
| | Azospirillum brasilense Sp245 | AZOBR_RS25575 | | phosphatidylethanolamine N-methyltransferase | sig. | 27 | 68 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2712 | | Phosphatidylethanolamine N-methyltransferase (RefSeq) | insig. | 29 | 69 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_11775 | | SAM-dependent methyltransferase | insig. | 26 | 56 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c07050 | | methyltransferase domain-containing protein | insig. | 37 | 50 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS11955 | | SAM-dependent methyltransferase | insig. | 47 | 27 |
| | Acinetobacter radioresistens SK82 | MPMX26_01104 | | Carboxy-S-adenosyl-L-methionine synthase | no data | 32 | 66 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS03890 | | class I SAM-dependent methyltransferase | insig. | 29 | 53 |
| | Alteromonas macleodii MIT1002 | MIT1002_03631 | | Ubiquinone/menaquinone biosynthesis methyltransferase ubiE | no data | 27 | 64 |
| | Azospirillum sp. SherDot2 | MPMX19_00751 | | 50S ribosomal protein L3 glutamine methyltransferase | insig. | 36 | 35 |
| | Shewanella oneidensis MR-1 | SO1988 | | hypothetical methyltransferase (NCBI ptt file) | insig. | 28 | 52 |
| | Rhodopseudomonas palustris CGA009 | TX73_000430 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 27 | 64 |
| | Caulobacter crescentus NA1000 | CCNA_03610 | | methyltransferase | insig. | 34 | 50 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03610 | | methyltransferase | cofit | 34 | 50 |
| | Sphingobium sp. HT1-2 | GFF218 | | Transcriptional regulator, ArsR family / Methyltransferase fusion | cofit | 32 | 71 |
| | Xanthobacter sp. DMC5 | GFF2934 | | Trans-aconitate 2-methyltransferase | insig. | 30 | 63 |
| | Dickeya dadantii 3937 | DDA3937_RS02435 | | trans-aconitate 2-methyltransferase | insig. | 27 | 55 |
| | Acinetobacter baumannii LAC-4 | RR41_RS17230 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 31 | 53 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_248 | | FIG025233: SAM-dependent methyltransferases | insig. | 31 | 50 |
| | Marinobacter adhaerens HP15 | HP15_3191 | | ubiquinone/menaquinone biosynthesis methyltransferase UbiE | no data | 29 | 53 |
| | Pseudomonas sp. S08-1 | OH686_09950 | | SAM-dependent | cofit | 27 | 64 |
| | Sinorhizobium meliloti 1021 | SMc01155 | | ubiquinone/menaquinone biosynthesis methyltransferase | no data | 27 | 75 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08625 | | class I SAM-dependent methyltransferase | insig. | 25 | 77 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_09200 | | methyltransferase | insig. | 31 | 50 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS12500 | | class I SAM-dependent methyltransferase | insig. | 26 | 71 |
| | Methanococcus maripaludis JJ | MMJJ_RS05515 | | class I SAM-dependent methyltransferase | no data | 25 | 72 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS16450 | | methyltransferase domain-containing protein | insig. | 24 | 61 |
| | Azospirillum brasilense Sp245 | AZOBR_RS00310 | | ribosomal RNA small subunit methyltransferase C | insig. | 45 | 30 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19485 | | ubiquinone/menaquinone biosynthesis methyltransferase | no data | 29 | 53 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS02235 | | methyltransferase domain-containing protein | cofit | 30 | 53 |
| | Pseudomonas sp. DMC3 | GFF3076 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 53 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05895 | | Methylase involved in ubiquinone/menaquinone biosynthesis | no data | 27 | 57 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3025 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 27 | 93 |
| | Rhodopseudomonas palustris CGA009 | TX73_018460 | | arsenite methyltransferase | insig. | 26 | 66 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_17945 | | SAM-dependent methyltransferase | insig. | 37 | 36 |
| | Dechlorosoma suillum PS | Dsui_0861 | | ubiquinone/menaquinone biosynthesis methyltransferase | no data | 30 | 64 |
| | Pseudomonas segetis P6 | MPMX49_04258 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 28 | 59 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0867 | | biotin biosynthesis protein BioC | no data | 27 | 55 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS10075 | | methyltransferase domain-containing protein | insig. | 32 | 57 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_299 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 30 | 53 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0427 | | conserved hypothetical protein | insig. | 29 | 51 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0427 | | conserved hypothetical protein | insig. | 29 | 51 |
| | Pseudomonas sp. SVBP6 | COO64_RS13150 | | class I SAM-dependent methyltransferase | insig. | 27 | 53 |
| | Pseudomonas sp. RS175 | PFR28_04989 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 53 |
| | Pseudomonas putida KT2440 | PP_1987 | | Methlytransferase, UbiE/COQ5 family | insig. | 31 | 56 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_09505 | | ubiquinone biosynthesis methyltransferase UbiE | no data | 30 | 53 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3779 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 30 | 53 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0596 | | delta(24)-sterol C-methyltransferase | strong | 30 | 61 |
| | Rhizobium sp. OAE497 | ABIE40_RS09965 | | class I SAM-dependent methyltransferase | insig. | 28 | 51 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1601 | | protein-(glutamine-N5) methyltransferase, release factor-specific | strong | 45 | 26 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_09950 | | class I SAM-dependent methyltransferase | no data | 36 | 38 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05319 | | Malonyl-[acyl-carrier protein] O-methyltransferase | cofit | 31 | 55 |
| | Acinetobacter radioresistens SK82 | MPMX26_00267 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | no data | 31 | 53 |
| | Pseudomonas sp. BP01 | JOY50_RS16620 | | class I SAM-dependent methyltransferase | insig. | 31 | 56 |