| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Dickeya dianthicola ME23 | DZA65_RS08690 | | methyltransferase domain-containing protein | insig. | 100 | 100 |
| o | Dickeya dianthicola 67-19 | HGI48_RS08095 | | class I SAM-dependent methyltransferase | insig. | 93 | 100 |
| o | Dickeya dadantii 3937 | DDA3937_RS07275 | | class I SAM-dependent methyltransferase | insig. | 91 | 100 |
| o | Sinorhizobium meliloti 1021 | SM_b21433 | | methyl-transferase, S-adenosyl-L-methionine (SAM)-MTase | insig. | 31 | 88 |
| | Agrobacterium fabrum C58 | Atu3392 | | methyltransferase | insig. | 33 | 59 |
| | Sinorhizobium meliloti 1021 | SM_b20059 | | SAM-dependent methyltransferase | insig. | 32 | 61 |
| | Bosea sp. OAE506 | ABIE41_RS01440 | | methyltransferase domain-containing protein | insig. | 32 | 59 |
| | Bosea sp. OAE506 | ABIE41_RS02445 | | class I SAM-dependent methyltransferase | insig. | 26 | 97 |
| | Dechlorosoma suillum PS | Dsui_2055 | | methylase involved in ubiquinone/menaquinone biosynthesis | no data | 34 | 58 |
| | Azospirillum sp. SherDot2 | MPMX19_00634 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | cofit | 32 | 66 |
| | Mycobacterium tuberculosis H37Rv | Rv0839 | | Conserved hypothetical protein | insig. | 38 | 43 |
| | Pseudomonas putida KT2440 | PP_5011 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 66 |
| | Azospirillum brasilense Sp245 | AZOBR_RS22845 | | methyltransferase | insig. | 40 | 47 |
| | Pseudomonas sp. BP01 | JOY50_RS09635 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 29 | 66 |
| | Pseudomonas sp. RS175 | PFR28_04989 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 62 |
| | Erwinia amylovora T8 | OLJFJH_16750 | | malonyl-ACP O-methyltransferase BioC | insig. | 39 | 43 |
| | Rhizobium sp. OAE497 | ABIE40_RS11955 | | metalloregulator ArsR/SmtB family transcription factor | sig. | 33 | 59 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_09505 | | ubiquinone biosynthesis methyltransferase UbiE | no data | 32 | 55 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3779 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 32 | 55 |
| | Pseudomonas sp. DMC3 | GFF3076 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 62 |
| | Dechlorosoma suillum PS | Dsui_0861 | | ubiquinone/menaquinone biosynthesis methyltransferase | no data | 29 | 58 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1562 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 31 | 55 |
| | Pseudomonas sp. S08-1 | OH686_10145 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 29 | 66 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_12380 | | ubiquinone biosynthesis methyltransferase UbiE | no data | 31 | 55 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS03780 | | malonyl-ACP O-methyltransferase BioC | cofit | 36 | 45 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11145 | ubiE;go_function=methyltransferase | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 31 | 55 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_28210 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 31 | 55 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50940 | ubiE;go_function=methyltransferase | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 31 | 55 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0389 | | 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase | no data | 31 | 55 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0389 | | 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase | no data | 31 | 55 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_299 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 31 | 55 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3585 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 30 | 59 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS01915 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 29 | 62 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS01915 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 29 | 62 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00597 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 29 | 62 |
| | Pseudomonas simiae WCS417 | PS417_01870 | | ubiquinone biosynthesis methyltransferase UbiE | no data | 29 | 62 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_00445 | | ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 29 | 59 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21750 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 36 | 56 |
| | Pseudomonas sp. SVBP6 | COO64_RS13515 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 29 | 62 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS02400 | | ubiquinone biosynthesis methyltransferase UbiE | no data | 29 | 59 |
| | Pseudomonas stutzeri RCH2 | Psest_3940 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 31 | 55 |
| | Agrobacterium fabrum C58 | Atu2124 | | transcriptional regulator, ArsR family | sig. | 37 | 51 |
| | Pectobacterium carotovorum WPP14 | HER17_RS20935 | | class I SAM-dependent methyltransferase | insig. | 32 | 47 |
| | Pseudomonas segetis P6 | ACVTMO_RS21115 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 58 |
| | Bosea sp. OAE506 | ABIE41_RS12470 | | metalloregulator ArsR/SmtB family transcription factor | insig. | 39 | 39 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS06060 | | class I SAM-dependent methyltransferase | insig. | 37 | 38 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c36480 | | ubiquinone/menaquinone biosynthesis methyltransferase UbiE | no data | 30 | 62 |
| | Marinobacter adhaerens HP15 | HP15_2483 | | protein containing methyltransferase type 11 domain | insig. | 35 | 38 |
| | Shewanella amazonensis SB2B | Sama_3202 | | ubiquinone/menaquinone biosynthesis methlytransferase UbiE (RefSeq) | no data | 30 | 49 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02145 | | Glycine/sarcosine N-methyltransferase | cofit | 28 | 58 |
| | Shewanella loihica PV-4 | Shew_3373 | | ubiquinone/menaquinone biosynthesis methyltransferase (RefSeq) | no data | 27 | 76 |
| | Pantoea sp. MT58 | IAI47_13520 | | malonyl-ACP O-methyltransferase BioC | insig. | 34 | 45 |
| | Dechlorosoma suillum PS | Dsui_0223 | | methylase involved in ubiquinone/menaquinone biosynthesis | cofit | 44 | 31 |
| | Azospirillum sp. SherDot2 | MPMX19_01135 | | putative methyltransferase YcgJ | insig. | 35 | 56 |
| | Alteromonas macleodii MIT1002 | MIT1002_03631 | | Ubiquinone/menaquinone biosynthesis methyltransferase ubiE | no data | 31 | 55 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3788 | | PUTATIVE METHYLTRANSFERASE | insig. | 39 | 42 |
| | Pseudomonas sp. BP01 | JOY50_RS07515 | | class I SAM-dependent methyltransferase | no data | 39 | 42 |
| | Agrobacterium fabrum C58 | Atu0320 | | ubiquinone/menaquinone biosynthesis methyltransferase | no data | 32 | 59 |
| | Mycobacterium tuberculosis H37Rv | Rv3038c | | Conserved protein | no data | 35 | 37 |
| | Azospirillum sp. SherDot2 | MPMX19_04629 | | D-inositol-3-phosphate glycosyltransferase | insig. | 39 | 40 |
| | Ralstonia solanacearum GMI1000 | RS_RS17980 | | class I SAM-dependent methyltransferase | insig. | 33 | 47 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01698 | | Methylase involved in ubiquinone/menaquinone biosynthesis | no data | 37 | 40 |
| | Paraburkholderia graminis OAS925 | ABIE53_000771 | | demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 30 | 49 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0744 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 29 | 47 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS15485 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | cofit | 28 | 61 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02005 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 49 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4794 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 30 | 55 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF260 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) | no data | 28 | 55 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS12085 | | class I SAM-dependent methyltransferase | insig. | 33 | 44 |
| | Variovorax sp. SCN45 | GFF2542 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase (EC 2.1.1.201) | no data | 27 | 63 |
| | Shewanella sp. ANA-3 | Shewana3_3725 | | demethylmenaquinone methyltransferase (RefSeq) | no data | 26 | 55 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS14495 | | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 35 | 38 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10320 | | class I SAM-dependent methyltransferase | insig. | 30 | 49 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10320 | | class I SAM-dependent methyltransferase | sig. | 30 | 49 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_248 | | FIG025233: SAM-dependent methyltransferases | insig. | 29 | 45 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3379.1 | | Transcriptional regulator, ArsR family / Methyltransferase fusion | sig. | 27 | 67 |
| | Shewanella oneidensis MR-1 | SO4199 | ubiE | ubiquinone/menaquinone biosynthesis methlytransferase UbiE (NCBI ptt file) | no data | 23 | 76 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3368 | | ubiquinone/menaquinone biosynthesis methyltransferase (RefSeq) | no data | 29 | 58 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4498 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 28 | 55 |
| | Enterobacter sp. TBS_079 | MPMX20_04447 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 28 | 55 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_12755 | | SAM-dependent methyltransferase | insig. | 29 | 40 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04613 | | demethylmenaquinone methyltransferase /2-octaprenyl-6-methoxy-1,4-benzoquinone methylase | no data | 29 | 49 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4023 | | PUTATIVE METHYLTRANSFERASE | insig. | 36 | 42 |
| | Escherichia fergusonii Becca | EFB2_04782 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 28 | 55 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS22115 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 55 |
| | Methanococcus maripaludis S2 | MMP_RS06075 | | class I SAM-dependent methyltransferase | sig. | 30 | 57 |
| | Escherichia coli ECOR27 | NOLOHH_06435 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 55 |
| | Escherichia coli ECOR38 | HEPCGN_12935 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | strong | 28 | 55 |
| | Escherichia coli ECRC100 | OKFHMN_14305 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 55 |
| | Escherichia coli ECRC101 | MCAODC_04810 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 55 |
| | Escherichia coli ECRC102 | NIAGMN_12060 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 55 |
| | Escherichia coli ECRC62 | BNILDI_05095 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 55 |
| | Escherichia coli ECRC98 | JDDGAC_17930 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 55 |
| | Escherichia coli ECRC99 | KEDOAH_13845 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 55 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04218 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 28 | 55 |
| | Escherichia coli BW25113 | b3833 | ubiE | ubiquinone/menaquinone biosynthesis methyltransferase (NCBI) | no data | 28 | 55 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS01885 | | metalloregulator ArsR/SmtB family transcription factor | strong | 28 | 46 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS02110 | | metalloregulator ArsR/SmtB family transcription factor | sig. | 28 | 46 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS00510 | | class I SAM-dependent methyltransferase | insig. | 36 | 42 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS03165 | | ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 29 | 49 |