Homologs of CSW01_08220 from Vibrio cholerae E7946 ATCC 55056

16S rRNA pseudouridine(516) synthase
SEED: Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal small subunit pseudouridine synthase A

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_08220 16S rRNA pseudouridine(516) synthase insig. 100 100
o Enterobacter sp. TBS_079 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A insig. 60 99
o Enterobacter asburiae PDN3 EX28DRAFT_0378 pseudouridine synthase insig. 59 99
o Shewanella loihica PV-4 Shew_2975 pseudouridine synthase (RefSeq) insig. 59 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 57 99
o Escherichia coli BL21 ECD_02113 16S rRNA pseudouridine(516) synthase insig. 57 99
o Escherichia fergusonii Becca EFB2_01673 Ribosomal small subunit pseudouridine synthase A insig. 57 99
o Escherichia coli ECOR27 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 57 99
o Escherichia coli ECRC100 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 57 99
o Escherichia coli ECRC101 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 57 99
o Escherichia coli ECRC102 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 57 99
o Escherichia coli ECRC62 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 57 99
o Escherichia coli ECRC98 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 57 99
o Escherichia coli ECRC99 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 57 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A insig. 57 99
o Escherichia coli Nissle 1917 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA no data 57 99
o Escherichia coli BW25113 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) strong 57 99
o Dickeya dadantii 3937 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA insig. 58 100
o Escherichia coli ECOR38 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 57 99
o Klebsiella michiganensis M5al BWI76_RS19810 16S rRNA pseudouridine(516) synthase no data 57 99
o Dickeya dianthicola 67-19 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA insig. 57 100
o Dickeya dianthicola ME23 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA insig. 57 100
o Serratia liquefaciens MT49 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA insig. 58 99
o Shewanella amazonensis SB2B Sama_2614 pseudouridine synthase, Rsu (RefSeq) insig. 55 99
o Pantoea sp. MT58 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA sig. 57 99
o Erwinia tracheiphila SCR3 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 56 99
o Rahnella sp. WP5 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA insig. 55 99
o Pectobacterium carotovorum WPP14 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA insig. 57 99
o Erwinia amylovora T8 OLJFJH_11710 16S rRNA pseudouridine(516) synthase RsuA insig. 54 99
o Shewanella sp. ANA-3 Shewana3_0760 ribosomal small subunit pseudouridine synthase A (RefSeq) insig. 54 99
o Pseudomonas sp. S08-1 OH686_05950 SSU rRNA pseudouridine(516) synthase insig. 46 99
o Marinobacter adhaerens HP15 HP15_3359 pseudouridine synthase, Rsu insig. 49 99
o Pseudomonas aeruginosa PA14 IKLFDK_03105 Ribosomal small subunit pseudouridine synthase A insig. 45 99
o Pseudomonas stutzeri RCH2 Psest_3049 pseudouridine synthase insig. 43 99
o Pseudomonas syringae pv. syringae B728a Psyr_3981 ribosomal small subunit pseudouridine synthase A insig. 45 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3981 ribosomal small subunit pseudouridine synthase A insig. 45 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3297 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 46 99
  Shewanella sp. ANA-3 Shewana3_3175 pseudouridine synthase, Rsu (RefSeq) insig. 42 99
  Shewanella loihica PV-4 Shew_0916 pseudouridine synthase (RefSeq) insig. 41 99
o Pseudomonas fluorescens SBW25 PFLU_RS07085 pseudouridine synthase insig. 44 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07085 pseudouridine synthase insig. 44 99
o Pseudomonas simiae WCS417 PS417_07010 pseudouridine synthase insig. 44 99
o Pseudomonas fluorescens FW300-N2E3 AO353_17535 16S rRNA pseudouridine(516) synthase insig. 45 99
o Pseudomonas fluorescens FW300-N2C3 AO356_04690 16S rRNA pseudouridine(516) synthase insig. 45 99
  Marinobacter adhaerens HP15 HP15_2675 pseudouridine synthase, Rsu insig. 42 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4535 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 44 99
o Pseudomonas sp. DMC3 GFF2251 Ribosomal small subunit pseudouridine synthase A cofit 45 98
o Pseudomonas sp. BP01 JOY50_RS14575 pseudouridine synthase insig. 43 99
o Pseudomonas putida KT2440 PP_1409 ribosomal small subunit pseudouridine synthase A insig. 43 99
o Pseudomonas sp. SVBP6 COO64_RS16420 pseudouridine synthase insig. 42 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2785 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 43 99
o Pseudomonas sp. RS175 PFR28_00665 Ribosomal small subunit pseudouridine synthase A insig. 43 99
  Shewanella amazonensis SB2B Sama_2785 pseudouridine synthase, Rsu (RefSeq) insig. 40 97
o Caulobacter crescentus NA1000 CCNA_01915 ribosomal small subunit pseudouridine synthase A strong 39 99
o Caulobacter crescentus NA1000 Δfur CCNA_01915 ribosomal small subunit pseudouridine synthase A cofit 39 99
o Dechlorosoma suillum PS Dsui_0824 pseudouridine synthase family protein insig. 39 99
o Variovorax sp. OAS795 ABID97_RS09900 16S rRNA pseudouridine(516) synthase insig. 38 99
o Variovorax sp. SCN45 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) insig. 40 94
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS12605 16S rRNA pseudouridine(516) synthase insig. 37 94
o Ralstonia solanacearum UW163 UW163_RS00960 16S rRNA pseudouridine(516) synthase insig. 37 94
  Methylophilus sp. DMC18 GFF98 Ribosomal small subunit pseudouridine synthase A insig. 43 78
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4611.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 37 100
o Fusobacterium nucleatum SB010 HUW76_04445 rRNA pseudouridine synthase cofit 36 98
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00325 16S rRNA pseudouridine(516) synthase insig. 46 73
o Rhodanobacter denitrificans MT42 LRK55_RS15690 pseudouridine synthase cofit 39 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS15935 rRNA pseudouridine synthase strong 39 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12840 rRNA pseudouridine synthase insig. 41 100
o Ralstonia solanacearum PSI07 RPSI07_RS20655 16S rRNA pseudouridine(516) synthase insig. 36 94
o Acinetobacter radioresistens SK82 MPMX26_01203 Ribosomal small subunit pseudouridine synthase A insig. 37 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS08605 pseudouridine synthase insig. 37 94
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5277 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) cofit 36 99
o Rhodanobacter sp. FW510-T8 OKGIIK_09050 Pseudouridine synthase cofit 40 100
  Acidovorax sp. GW101-3H11 Ac3H11_4423 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 39 77
o Cupriavidus basilensis FW507-4G11 RR42_RS15880 pseudouridine synthase insig. 38 99
o Magnetospirillum magneticum AMB-1 AMB_RS12445 rRNA pseudouridine synthase insig. 37 99
o Ralstonia solanacearum GMI1000 RS_RS03390 16S rRNA pseudouridine(516) synthase insig. 36 94
o Lysobacter sp. OAE881 ABIE51_RS18480 pseudouridine synthase cofit 35 100
o Paraburkholderia graminis OAS925 ABIE53_003276 16S rRNA pseudouridine516 synthase insig. 34 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS03150 16S rRNA pseudouridine(516) synthase insig. 33 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11350 pseudouridine synthase insig. 40 99
o Burkholderia phytofirmans PsJN BPHYT_RS15560 pseudouridine synthase insig. 34 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04053 ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-) insig. 38 79
  Synechococcus elongatus PCC 7942 Synpcc7942_1010 ribosomal large subunit pseudouridine synthase B strong 35 97
o Herbaspirillum seropedicae SmR1 HSERO_RS08590 pseudouridine synthase insig. 34 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0719 pseudouridine synthase no data 32 99
  Synechocystis sp000284455 PCC 6803 SGL_RS12865 pseudouridine synthase insig. 33 100
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 30 100
  Bacteroides stercoris CC31F HMPREF1181_RS07005 pseudouridine synthase no data 33 98
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1070 pseudouridine synthase insig. 37 69
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11165 pseudouridine synthase no data 31 99
  Phocaeicola dorei CL03T12C01 ABI39_RS08040 pseudouridine synthase no data 33 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00420 pseudouridine synthase no data 33 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02130 pseudouridine synthase sig. 34 74
  Vibrio cholerae E7946 ATCC 55056 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF insig. 30 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17510 pseudouridylate synthase strong 32 98
  Caulobacter crescentus NA1000 CCNA_00898 ribosomal large subunit pseudouridine synthase F cofit 32 99
  Caulobacter crescentus NA1000 Δfur CCNA_00898 ribosomal large subunit pseudouridine synthase F cofit 32 99
  Pseudomonas stutzeri RCH2 Psest_0568 pseudouridine synthase insig. 37 70
  Bacteroides thetaiotaomicron VPI-5482 BT3872 ribosomal large subunit pseudouridine synthase B (NCBI ptt file) no data 31 98
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02720 pseudouridine synthase insig. 37 69