Homologs of CSW01_02640 from Vibrio cholerae E7946 ATCC 55056

ribonuclease H
SEED: Ribonuclease HI, Vibrio paralog
KEGG: ribonuclease HI

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_02640 ribonuclease H insig. 100 100
o Alteromonas macleodii MIT1002 MIT1002_02476 Ribonuclease HI insig. 48 95
  Cupriavidus basilensis FW507-4G11 RR42_RS13580 ribonuclease H no data 42 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS14175 ribonuclease HI no data 41 97
  Ralstonia solanacearum GMI1000 RS_RS07595 ribonuclease H no data 41 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02225 ribonuclease HI no data 41 97
  Ralstonia solanacearum UW163 UW163_RS15535 ribonuclease HI no data 41 97
  Ralstonia solanacearum PSI07 RPSI07_RS15220 ribonuclease HI no data 40 97
  Dechlorosoma suillum PS Dsui_2482 ribonuclease HI no data 42 95
  Herbaspirillum seropedicae SmR1 HSERO_RS17110 ribonuclease H strong 41 97
  Pseudomonas stutzeri RCH2 Psest_2073 Ribonuclease HI no data 42 92
  Pseudomonas putida KT2440 PP_4142 ribonuclease H no data 41 95
  Caulobacter crescentus NA1000 CCNA_03476 ribonuclease HI strong 41 95
  Caulobacter crescentus NA1000 Δfur CCNA_03476 ribonuclease HI cofit 41 95
  Magnetospirillum magneticum AMB-1 AMB_RS03905 ribonuclease H cofit 39 95
  Alteromonas macleodii MIT1002 MIT1002_01690 Ribonuclease HI cofit 40 99
  Castellaniella sp019104865 MT123 ABCV34_RS10475 ribonuclease HI no data 39 96
  Serratia liquefaciens MT49 IAI46_04145 ribonuclease HI no data 40 95
  Dickeya dadantii 3937 DDA3937_RS16050 ribonuclease HI insig. 39 97
  Acidovorax sp. GW101-3H11 Ac3H11_480 Ribonuclease HI (EC 3.1.26.4) no data 42 92
  Pectobacterium carotovorum WPP14 HER17_RS05465 ribonuclease HI no data 39 97
  Shewanella amazonensis SB2B Sama_1881 rnhA ribonuclease H (RefSeq) strong 41 97
  Azospirillum brasilense Sp245 AZOBR_RS10505 ribonuclease H insig. 38 95
  Pseudomonas fluorescens FW300-N2E3 AO353_23500 ribonuclease H no data 41 95
  Pantoea sp. MT58 IAI47_15330 ribonuclease HI no data 39 96
  Dickeya dianthicola 67-19 HGI48_RS16170 ribonuclease HI insig. 38 97
  Phaeobacter inhibens DSM 17395 PGA1_c00930 ribonuclease H no data 41 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3338 Ribonuclease HI (EC 3.1.26.4) no data 39 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_11385 ribonuclease HI no data 38 96
  Escherichia fergusonii Becca EFB2_03829 Ribonuclease HI sig. 40 95
  Rahnella sp. WP5 EX31_RS21190 ribonuclease HI cofit 38 95
  Pseudomonas sp. S08-1 OH686_03570 Ribonuclease HI no data 39 96
  Escherichia coli Nissle 1917 ECOLIN_RS01170 ribonuclease HI no data 40 95
  Dickeya dianthicola ME23 DZA65_RS17255 ribonuclease HI insig. 37 97
  Escherichia coli BL21 ECD_00207 ribonuclease HI no data 40 95
  Escherichia coli ECOR27 NOLOHH_02315 rnhA ribonuclease HI cofit 40 95
  Escherichia coli ECOR38 HEPCGN_07910 rnhA ribonuclease HI cofit 40 95
  Escherichia coli ECRC101 OKFHMN_09970 rnhA ribonuclease HI insig. 40 95
  Escherichia coli ECRC101 MCAODC_00485 rnhA ribonuclease HI insig. 40 95
  Escherichia coli ECRC102 NIAGMN_07820 rnhA ribonuclease HI no data 40 95
  Escherichia coli ECRC62 BNILDI_09355 rnhA ribonuclease HI insig. 40 95
  Escherichia coli ECRC98 JDDGAC_13565 rnhA ribonuclease HI no data 40 95
  Escherichia coli ECRC99 KEDOAH_18185 rnhA ribonuclease HI no data 40 95
  Escherichia coli BW25113 b0214 rnhA ribonuclease H (NCBI) no data 40 95
  Enterobacter asburiae PDN3 EX28DRAFT_2680 Ribonuclease HI no data 39 95
  Enterobacter sp. TBS_079 MPMX20_00899 Ribonuclease HI insig. 39 95
  Klebsiella michiganensis M5al BWI76_RS05450 ribonuclease HI strong 39 95
  Kangiella aquimarina DSM 16071 B158DRAFT_1063 Ribonuclease HI no data 41 96
  Shewanella loihica PV-4 Shew_2112 ribonuclease H (RefSeq) insig. 41 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4598 Ribonuclease HI (EC 3.1.26.4) no data 40 95
  Pseudomonas fluorescens FW300-N2C3 AO356_24490 ribonuclease H no data 40 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_589 Ribonuclease HI (EC 3.1.26.4) no data 40 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03447 Ribonuclease HI cofit 40 95
  Sinorhizobium meliloti 1021 SMc00018 ribonuclease H no data 39 97
  Pseudomonas sp. RS175 PFR28_01554 Ribonuclease HI no data 40 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4046 Ribonuclease HI (EC 3.1.26.4) no data 38 95
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05650 ribonuclease HI no data 41 92
  Pseudomonas fluorescens SBW25 PFLU_RS12920 ribonuclease HI no data 39 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12920 ribonuclease HI no data 39 95
  Dinoroseobacter shibae DFL-12 Dshi_0182 ribonuclease H (RefSeq) no data 38 94
  Pseudomonas simiae WCS417 PS417_12230 ribonuclease H no data 38 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04397 RNase HI no data 38 92
  Paraburkholderia graminis OAS925 ABIE53_003009 ribonuclease HI no data 38 92
  Pseudomonas syringae pv. syringae B728a Psyr_1763 RNase HI no data 39 95
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1763 RNase HI no data 39 95
  Erwinia tracheiphila SCR3 LU632_RS01090 rnhA ribonuclease HI insig. 39 95
  Burkholderia phytofirmans PsJN BPHYT_RS14220 ribonuclease H no data 38 92
  Synechococcus elongatus PCC 7942 Synpcc7942_2183 rnhA RNase HI sig. 36 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS04750 ribonuclease HI no data 37 92
  Marinobacter adhaerens HP15 HP15_1803 ribonuclease Hi chain A-like protein no data 38 93
  Variovorax sp. OAS795 ABID97_RS14740 ribonuclease HI no data 39 92
  Rhodopseudomonas palustris CGA009 TX73_022115 ribonuclease HI no data 40 92
  Rhizobium sp. OAE497 ABIE40_RS04115 ribonuclease HI insig. 39 92
  Azospirillum sp. SherDot2 MPMX19_01081 Ribonuclease HI no data 36 92
  Agrobacterium fabrum C58 Atu0776 ribonuclease H no data 38 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3252 Ribonuclease HI no data 38 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4259 Ribonuclease HI (EC 3.1.26.4) no data 39 92
  Variovorax sp. SCN45 GFF1119 Ribonuclease HI (EC 3.1.26.4) strong 39 92
  Shewanella sp. ANA-3 Shewana3_2366 rnhA ribonuclease H (RefSeq) insig. 34 97
  Shewanella oneidensis MR-1 SO2560 rnhA ribonuclease HI (NCBI ptt file) no data 34 97
  Bosea sp. OAE506 ABIE41_RS23050 ribonuclease HI no data 35 92
  Sinorhizobium meliloti 1021 SMc02327 ribonuclease HI protein insig. 34 94
  Lysobacter sp. OAE881 ABIE51_RS14100 ribonuclease HI no data 44 64
  Desulfovibrio vulgaris Hildenborough JW710 DVU0689 rnhA ribonuclease HI (TIGR) insig. 41 64
  Desulfovibrio vulgaris Miyazaki F DvMF_2669 rnhA ribonuclease H (RefSeq) strong 40 68
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4033.1 Ribonuclease HI (EC 3.1.26.4) no data 38 68
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07275 ribonuclease HI no data 39 68
  Rhodospirillum rubrum S1H Rru_A3054 Ribonuclease H (NCBI) insig. 35 92
  Acinetobacter radioresistens SK82 MPMX26_02275 Ribonuclease H cofit 34 95
  Rhodanobacter sp. FW510-T8 OKGIIK_07990 rnhA ribonuclease HI no data 41 68
  Variovorax sp. OAS795 ABID97_RS09575 ribonuclease H insig. 38 96
  Rhodanobacter denitrificans MT42 LRK55_RS16500 ribonuclease HI no data 40 68
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16775 ribonuclease HI no data 40 68
  Bifidobacterium breve UCC2003 BBR_RS18725 ribonuclease HI strong 45 60
  Rhizobium sp. OAE497 ABIE40_RS07515 ribonuclease H sig. 34 64
  Agrobacterium fabrum C58 Atu3177 ribonuclease H insig. 30 95
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1813 Ribonuclease HI insig. 36 97
  Shewanella loihica PV-4 Shew_1682 ribonuclease H (RefSeq) insig. 35 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09645 ribonuclease HI no data 40 68
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00830 ribonuclease HI no data 32 95