Homologs of CA265_RS18760 from Pedobacter sp. GW460-11-11-14-LB5

ribonuclease III
SEED: Ribonuclease III (EC 3.1.26.3)
KEGG: ribonuclease III

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18760 ribonuclease III strong 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01610 ribonuclease III cofit 70 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00745 ribonuclease III sig. 46 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2313 ribonuclease III, bacterial strong 47 97
  Bacteroides thetaiotaomicron VPI-5482 BT3357 ribonuclease III (NCBI ptt file) strong 47 88
  Bacteroides ovatus ATCC 8483 BACOVA_01957 ribonuclease III insig. 47 88
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10765 ribonuclease III strong 43 95
  Bacteroides stercoris CC31F HMPREF1181_RS02420 ribonuclease III cofit 45 88
  Phocaeicola dorei CL03T12C01 ABI39_RS06330 ribonuclease III cofit 43 95
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07075 ribonuclease III insig. 40 93
o Kangiella aquimarina DSM 16071 B158DRAFT_2187 ribonuclease III, bacterial sig. 34 93
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07150 ribonuclease III no data 34 84
o Rhodanobacter sp. FW510-T8 OKGIIK_07870 rnc ribonuclease III cofit 34 84
o Azospirillum sp. SherDot2 MPMX19_00843 Ribonuclease 3 no data 33 89
o Rhodanobacter denitrificans MT42 LRK55_RS16685 ribonuclease III strong 33 84
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16970 ribonuclease III strong 33 84
o Desulfovibrio vulgaris Hildenborough JW710 DVU1440 rnc ribonuclease III (TIGR) no data 32 92
o Magnetospirillum magneticum AMB-1 AMB_RS11425 ribonuclease III cofit 31 90
o Alteromonas macleodii MIT1002 MIT1002_02713 Ribonuclease 3 no data 34 90
o Rhodospirillum rubrum S1H Rru_A1852 Ribonuclease III (NCBI) no data 30 87
o Mycobacterium tuberculosis H37Rv Rv2925c Probable ribonuclease III Rnc (RNase III) no data 32 77
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3673.1 Ribonuclease III (EC 3.1.26.3) no data 30 85
o Pseudomonas simiae WCS417 PS417_05190 ribonuclease III no data 34 71
  Rhodopseudomonas palustris CGA009 TX73_013975 ribonuclease III insig. 30 86
o Fusobacterium nucleatum SB010 HUW76_02250 ribonuclease III no data 33 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_12455 ribonuclease 3 no data 30 93
o Methanococcus maripaludis S2 MMP_RS07840 ribonuclease III sig. 33 86
o Pseudomonas fluorescens SBW25 PFLU_RS05260 ribonuclease III no data 34 71
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05260 ribonuclease III no data 34 71
  Dinoroseobacter shibae DFL-12 Dshi_0200 Ribonuclease III (RefSeq) no data 33 68
o Pseudomonas fluorescens FW300-N2C3 AO356_17495 ribonuclease III no data 34 69
  Azospirillum brasilense Sp245 AZOBR_RS22070 ribonuclease III no data 31 77
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05535 ribonuclease III no data 30 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5426 Ribonuclease III (EC 3.1.26.3) no data 35 69
o Methanococcus maripaludis JJ MMJJ_RS06515 ribonuclease III insig. 33 86
o Lysobacter sp. OAE881 ABIE51_RS13860 ribonuclease III no data 29 83
o Dechlorosoma suillum PS Dsui_2460 ribonuclease III no data 27 95
o Pseudomonas fluorescens FW300-N2E3 AO353_04510 ribonuclease III no data 33 69
o Acinetobacter radioresistens SK82 MPMX26_02156 Ribonuclease 3 no data 28 88
o Shewanella sp. ANA-3 Shewana3_3026 rnc ribonuclease III (RefSeq) no data 31 92
o Shewanella loihica PV-4 Shew_1054 ribonuclease III (RefSeq) no data 29 91
o Pseudomonas syringae pv. syringae B728a Psyr_3951 RNAse III no data 33 69
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3951 RNAse III no data 33 69
o Pseudomonas putida KT2440 PP_1433 Ribonuclease 3 no data 31 92
  Herbaspirillum seropedicae SmR1 HSERO_RS09660 ribonuclease III strong 30 92
o Shewanella oneidensis MR-1 SO1348 rnc ribonuclease III (NCBI ptt file) no data 30 92
o Pseudomonas stutzeri RCH2 Psest_3092 ribonuclease III, bacterial strong 32 69
  Variovorax sp. OAS795 ABID97_RS08365 ribonuclease III strong 33 63
o Shewanella amazonensis SB2B Sama_0880 rnc ribonuclease III (RefSeq) no data 29 93
o Pseudomonas sp. RS175 PFR28_03523 Ribonuclease 3 no data 36 61
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_892 Ribonuclease III (EC 3.1.26.3) no data 34 64
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4840 Ribonuclease III (EC 3.1.26.3) no data 34 64
o Bosea sp. OAE506 ABIE41_RS19930 ribonuclease III no data 29 89
o Desulfovibrio vulgaris Miyazaki F DvMF_0243 rnc ribonuclease III (RefSeq) no data 29 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS04610 ribonuclease III insig. 33 64
o Pseudomonas sp. S08-1 OH686_20080 ribonuclease III no data 35 61
o Synechococcus elongatus PCC 7942 Synpcc7942_1645 rnc RNAse III strong 28 95
  Burkholderia phytofirmans PsJN BPHYT_RS14370 ribonuclease III insig. 32 64
  Paraburkholderia graminis OAS925 ABIE53_003036 ribonuclease-3 sig. 32 64
o Marinobacter adhaerens HP15 HP15_784 ribonuclease 3 insig. 28 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04362 RNAse III (EC 3.1.26.3) insig. 32 64
  Acidovorax sp. GW101-3H11 Ac3H11_1566 Ribonuclease III (EC 3.1.26.3) no data 33 68
  Variovorax sp. SCN45 GFF3870 Ribonuclease III (EC 3.1.26.3) strong 32 63
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3346 Ribonuclease III (EC 3.1.26.3) no data 32 72
o Bifidobacterium breve UCC2003 BBR_RS12355 ribonuclease III strong 31 95
o Phaeobacter inhibens DSM 17395 PGA1_c01060 ribonuclease 3 sig. 27 89
o Pantoea sp. MT58 IAI47_04880 ribonuclease III no data 31 57
  Cupriavidus basilensis FW507-4G11 RR42_RS14040 ribonuclease III no data 31 69
  Castellaniella sp019104865 MT123 ABCV34_RS08325 ribonuclease III no data 35 55
o Sinorhizobium meliloti 1021 SMc02652 ribonuclease III no data 28 84
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2475 Ribonuclease III (EC 3.1.26.3) strong 29 86
  Ralstonia solanacearum PSI07 RPSI07_RS18975 ribonuclease III no data 29 70
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14485 ribonuclease III no data 30 69
  Ralstonia solanacearum UW163 UW163_RS11950 ribonuclease III no data 30 69
o Ralstonia sp. UNC404CL21Col ABZR87_RS10205 ribonuclease III no data 27 90
o Escherichia coli BL21 ECD_02461 RNase III no data 28 86
o Escherichia fergusonii Becca EFB2_01329 Ribonuclease 3 no data 28 86
o Escherichia coli ECOR27 NOLOHH_13085 rnc ribonuclease III no data 28 86
o Escherichia coli ECOR38 HEPCGN_20555 rnc ribonuclease III no data 28 86
o Escherichia coli ECRC101 OKFHMN_21410 rnc ribonuclease III no data 28 86
o Escherichia coli ECRC101 MCAODC_11940 rnc ribonuclease III no data 28 86
o Escherichia coli ECRC102 NIAGMN_19180 rnc ribonuclease III no data 28 86
o Escherichia coli ECRC62 BNILDI_11885 rnc ribonuclease III no data 28 86
o Escherichia coli ECRC98 JDDGAC_25075 rnc ribonuclease III no data 28 86
o Escherichia coli ECRC99 KEDOAH_06810 rnc ribonuclease III no data 28 86
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01140 Ribonuclease 3 no data 28 86
o Escherichia coli Nissle 1917 ECOLIN_RS14530 ribonuclease III no data 28 86
o Escherichia coli BW25113 b2567 rnc ribonuclease III (NCBI) strong 28 86
o Rhizobium sp. OAE497 ABIE40_RS06075 ribonuclease III no data 28 92
o Dickeya dianthicola ME23 DZA65_RS16900 ribonuclease III no data 28 86
o Enterobacter sp. TBS_079 MPMX20_03438 Ribonuclease 3 no data 28 86
  Ralstonia solanacearum GMI1000 RS_RS05265 ribonuclease 3 no data 29 70
o Enterobacter asburiae PDN3 EX28DRAFT_0079 ribonuclease III, bacterial no data 28 86
o Dickeya dadantii 3937 DDA3937_RS15735 ribonuclease III no data 28 86
o Dickeya dianthicola 67-19 HGI48_RS15820 ribonuclease III no data 28 86
o Klebsiella michiganensis M5al BWI76_RS21320 ribonuclease 3 no data 27 86
o Pectobacterium carotovorum WPP14 HER17_RS05815 ribonuclease III no data 28 86
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1946 ribonuclease III, bacterial no data 27 86
o Agrobacterium fabrum C58 Atu1035 ribonuclease III no data 24 91
o Erwinia tracheiphila SCR3 LU632_RS15385 rnc ribonuclease III insig. 29 57