Homologs of BBR_RS19915 from Bifidobacterium breve UCC2003

16S rRNA (cytidine(1402)-2'-O)-methyltransferase
SEED: rRNA small subunit methyltransferase I

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bifidobacterium breve UCC2003 BBR_RS19915 16S rRNA (cytidine(1402)-2'-O)-methyltransferase strong 100 100
o Mycobacterium tuberculosis H37Rv Rv1003 Conserved protein insig. 44 86
  Dickeya dadantii 3937 DDA3937_RS01715 16S rRNA (cytidine(1402)-2'-O)-methyltransferase sig. 47 71
  Dickeya dianthicola 67-19 HGI48_RS01610 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 46 71
  Dickeya dianthicola ME23 DZA65_RS01685 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 46 71
  Pectobacterium carotovorum WPP14 HER17_RS19860 16S rRNA (cytidine(1402)-2'-O)-methyltransferase cofit 45 75
  Rahnella sp. WP5 EX31_RS12550 16S rRNA (cytidine(1402)-2'-O)-methyltransferase cofit 44 71
  Escherichia coli ECOR27 NOLOHH_10035 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 45 67
  Escherichia coli ECRC62 BNILDI_01495 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 45 67
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00555 Ribosomal RNA small subunit methyltransferase I cofit 45 67
  Escherichia coli BL21 ECD_03013 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent cofit 45 67
  Escherichia fergusonii Becca EFB2_00677 Ribosomal RNA small subunit methyltransferase I insig. 45 67
  Escherichia coli ECRC101 OKFHMN_18235 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 45 67
  Escherichia coli ECRC101 MCAODC_08755 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 45 67
  Escherichia coli ECRC102 NIAGMN_15995 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 45 67
  Escherichia coli ECRC98 JDDGAC_21860 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase no data 45 67
  Escherichia coli ECRC99 KEDOAH_09915 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase no data 45 67
  Escherichia coli Nissle 1917 ECOLIN_RS18085 16S rRNA (cytidine(1402)-2'-O)-methyltransferase no data 45 67
  Escherichia coli BW25113 b3146 yraL predicted methyltransferase (NCBI) strong 45 67
  Escherichia coli ECOR38 HEPCGN_17110 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase cofit 45 67
  Pantoea sp. MT58 IAI47_02850 16S rRNA (cytidine(1402)-2'-O)-methyltransferase sig. 47 67
o Erwinia tracheiphila SCR3 LU632_RS02230 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase sig. 40 83
o Serratia liquefaciens MT49 IAI46_22295 16S rRNA (cytidine(1402)-2'-O)-methyltransferase cofit 45 68
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1521 rRNA small subunit methyltransferase I insig. 44 67
o Shewanella amazonensis SB2B Sama_3353 hypothetical protein (RefSeq) strong 40 81
  Enterobacter asburiae PDN3 EX28DRAFT_3195 16S rRNA (cytidine(1402)-2'-O)-methyltransferase cofit 44 67
  Marinobacter adhaerens HP15 HP15_554 tetrapyrrole methylase family protein sig. 43 75
  Klebsiella michiganensis M5al BWI76_RS24910 rRNA (cytidine-2'-O-)-methyltransferase strong 45 67
  Enterobacter sp. TBS_079 MPMX20_04050 Ribosomal RNA small subunit methyltransferase I sig. 43 67
o Shewanella loihica PV-4 Shew_0228 uroporphyrin-III C/tetrapyrrole methyltransferase (RefSeq) strong 39 81
o Magnetospirillum magneticum AMB-1 AMB_RS22780 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 40 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS22250 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 39 68
  Pseudomonas putida KT2440 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase strong 44 68
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13730 16S rRNA (cytidine(1402)-2'-O)-methyltransferase strong 39 66
  Synechococcus elongatus PCC 7942 Synpcc7942_0174 hypothetical protein strong 43 74
  Pseudomonas fluorescens FW300-N2E3 AO353_15290 methyltransferase strong 42 72
o Shewanella sp. ANA-3 Shewana3_3879 hypothetical protein (RefSeq) strong 37 81
o Vibrio cholerae E7946 ATCC 55056 CSW01_03090 rRNA (cytidine-2'-O-)-methyltransferase insig. 40 82
  Lysobacter sp. OAE881 ABIE51_RS04695 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 44 68
o Shewanella oneidensis MR-1 SO0301 hypothetical methyltransferase (NCBI ptt file) sig. 37 81
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1643 rRNA small subunit methyltransferase I sig. 41 72
  Phocaeicola dorei CL03T12C01 ABI39_RS09280 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 39 66
  Pseudomonas sp. RS175 PFR28_03597 Ribosomal RNA small subunit methyltransferase I sig. 41 71
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5346 rRNA small subunit methyltransferase I strong 40 75
  Acinetobacter radioresistens SK82 MPMX26_02282 Ribosomal RNA small subunit methyltransferase I cofit 39 68
  Azospirillum sp. SherDot2 MPMX19_02471 Ribosomal RNA small subunit methyltransferase I insig. 42 73
  Pseudomonas stutzeri RCH2 Psest_3270 probable S-adenosylmethionine-dependent methyltransferase, YraL family insig. 42 72
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_953 rRNA small subunit methyltransferase I no data 41 70
  Rhodanobacter denitrificans MT42 LRK55_RS11925 16S rRNA (cytidine(1402)-2'-O)-methyltransferase strong 42 70
  Pseudomonas sp. S08-1 OH686_08340 16S rRNA (cytidine(1402)-2'-O)-methyltransferase cofit 41 71
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12190 16S rRNA (cytidine(1402)-2'-O)-methyltransferase strong 42 70
  Pseudomonas fluorescens FW300-N2C3 AO356_17110 methyltransferase strong 40 75
  Rhodanobacter sp. FW510-T8 OKGIIK_11735 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 42 70
  Bacteroides stercoris CC31F HMPREF1181_RS09565 16S rRNA (cytidine(1402)-2'-O)-methyltransferase sig. 38 66
  Bacteroides ovatus ATCC 8483 BACOVA_03073 S-adenosylmethionine-dependent methyltransferase, YraL family no data 37 66
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24030 rRNA (cytidine-2'-O-)-methyltransferase strong 38 66
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4371.1 rRNA small subunit methyltransferase I insig. 42 66
  Pseudomonas syringae pv. syringae B728a Psyr_4112 Protein of unknown function UPF0011 sig. 41 67
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4112 Protein of unknown function UPF0011 strong 41 67
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04125 16S rRNA (cytidine(1402)-2'-O)-methyltransferase strong 37 65
  Bacteroides thetaiotaomicron VPI-5482 BT2273 methyltransferase (NCBI ptt file) no data 36 66
  Pseudomonas fluorescens SBW25 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase cofit 41 73
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase strong 41 73
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0849 probable S-adenosylmethionine-dependent methyltransferase, YraL family strong 40 66
o Rhodopseudomonas palustris CGA009 TX73_001680 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 39 84
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11380 16S rRNA (cytidine(1402)-2'-O)-methyltransferase strong 43 66
o Dinoroseobacter shibae DFL-12 Dshi_2831 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (RefSeq) sig. 39 87
o Azospirillum brasilense Sp245 AZOBR_RS02155 16S rRNA methyltransferase sig. 42 72
o Bosea sp. OAE506 ABIE41_RS03315 16S rRNA (cytidine(1402)-2'-O)-methyltransferase sig. 42 84
  Pseudomonas simiae WCS417 PS417_04590 methyltransferase strong 41 70
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17080 rRNA (cytidine-2'-O-)-methyltransferase strong 38 65
  Rhodospirillum rubrum S1H Rru_A3693 Protein of unknown function UPF0011 (NCBI) insig. 45 64
  Herbaspirillum seropedicae SmR1 HSERO_RS23345 16S rRNA methyltransferase sig. 42 69
  Sinorhizobium meliloti 1021 SMc00416 hypothetical protein strong 44 65
  Dechlorosoma suillum PS Dsui_0251 putative S-adenosylmethionine-dependent methyltransferase, YraL family cofit 42 64
  Burkholderia phytofirmans PsJN BPHYT_RS01940 16S rRNA methyltransferase sig. 42 68
  Kangiella aquimarina DSM 16071 B158DRAFT_2109 probable S-adenosylmethionine-dependent methyltransferase, YraL family insig. 37 68
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2755 16S rRNA (cytidine(1402)-2'-O)-methyltransferase sig. 38 85
  Rhizobium sp. OAE497 ABIE40_RS01370 16S rRNA (cytidine(1402)-2'-O)-methyltransferase strong 40 74
o Alteromonas macleodii MIT1002 MIT1002_03113 Ribosomal RNA small subunit methyltransferase I cofit 36 81
o Castellaniella sp019104865 MT123 ABCV34_RS14320 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 37 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS00655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase cofit 40 68
  Agrobacterium fabrum C58 Atu0302 tetrapyrrole methylase family protein strong 39 71
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02152 16S rRNA (cytidine1402-2'-O)-methyltransferase sig. 41 68
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13300 16S rRNA (cytidine(1402)-2'-O)-methyltransferase no data 38 85
  Caulobacter crescentus NA1000 CCNA_00143 ribosomal RNA small subunit methyltransferase I strong 38 78
  Caulobacter crescentus NA1000 Δfur CCNA_00143 ribosomal RNA small subunit methyltransferase I cofit 38 78
  Paraburkholderia graminis OAS925 ABIE53_000470 16S rRNA (cytidine1402-2'-O)-methyltransferase strong 40 68
o Phaeobacter inhibens DSM 17395 PGA1_c26730 probable S-adenosylmethionine-dependent methyltransferase, YraL family sig. 40 86
  Fusobacterium nucleatum SB010 HUW76_04235 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 34 67
  Cupriavidus basilensis FW507-4G11 RR42_RS19740 16S rRNA methyltransferase sig. 40 67
  Desulfovibrio vulgaris Hildenborough JW710 DVU0832 tetrapyrrole methylase family protein (TIGR) insig. 37 78
  Desulfovibrio vulgaris Miyazaki F DvMF_2880 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (RefSeq) insig. 39 62
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS08495 16S rRNA (cytidine(1402)-2'-O)-methyltransferase strong 39 72
  Ralstonia solanacearum UW163 UW163_RS05115 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 39 72
  Ralstonia solanacearum PSI07 RPSI07_RS08730 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 38 72
  Acidovorax sp. GW101-3H11 Ac3H11_4466 rRNA small subunit methyltransferase I no data 37 66
  Ralstonia solanacearum GMI1000 RS_RS16360 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 40 72
  Ralstonia sp. UNC404CL21Col ABZR87_RS03815 16S rRNA (cytidine(1402)-2'-O)-methyltransferase insig. 36 72
  Variovorax sp. SCN45 GFF3735 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) insig. 37 58