Homologs of Atu5490 from Agrobacterium fabrum C58

ECF family RNA polymerase sigma factor
SEED: ECF family sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Agrobacterium fabrum C58	Atu5490		ECF family RNA polymerase sigma factor	insig.	100	100
	Agrobacterium fabrum C58	Atu5283		ECF family RNA polymerase sigma factor	no data	87	67
o	Rhizobium sp. OAE497	ABIE40_RS21790		sigma-70 family RNA polymerase sigma factor	cofit	47	89
o	Sinorhizobium meliloti 1021	SM_b21484		RNA polymerase sigma-E factor (sigma-24) protein	insig.	45	90
	Xanthobacter sp. DMC5	GFF2321		ECF RNA polymerase sigma factor EcfG	no data	46	87
	Rhizobium sp. OAE497	ABIE40_RS27415		sigma-70 family RNA polymerase sigma factor	insig.	45	84
	Rhodopseudomonas palustris CGA009	TX73_021900		sigma-70 family RNA polymerase sigma factor	strong	46	83
	Sphingobium sp. HT1-2	GFF4975		RNA polymerase ECF-type sigma factor	cofit	42	85
	Dinoroseobacter shibae DFL-12	Dshi_3835		RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq)	insig.	41	84
	Sphingobium sp. HT1-2	GFF5151		RNA polymerase ECF-type sigma factor	cofit	42	85
	Agrobacterium fabrum C58	Atu4160		RNA polymerase sigma factor	strong	42	79
	Rhizobium sp. OAE497	ABIE40_RS14450		RNA polymerase sigma factor	insig.	40	91
	Sphingobium sp. HT1-2	GFF2317		RNA polymerase ECF-type sigma factor	cofit	38	92
	Phaeobacter inhibens DSM 17395	PGA1_c27070		RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup)	insig.	39	82
	Sinorhizobium meliloti 1021	SMc01506		RNA polymerase sigma factor	strong	40	86
	Azospirillum brasilense Sp245	AZOBR_RS06360		RNA polymerase subunit sigma-24	no data	41	82
	Bosea sp. OAE506	ABIE41_RS04095		sigma-70 family RNA polymerase sigma factor	strong	38	84
	Sphingomonas koreensis DSMZ 15582	Ga0059261_3853		RNA polymerase sigma factor, sigma-70 family	insig.	42	80
	Azospirillum sp. SherDot2	MPMX19_00764		ECF RNA polymerase sigma factor EcfG	insig.	41	79
	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS14775		sigma-70 family RNA polymerase sigma factor	strong	38	83
	Sphingomonas koreensis DSMZ 15582	Ga0059261_3492		RNA polymerase sigma factor, sigma-70 family	strong	37	82
	Sphingobium sp. HT1-2	GFF5325		RNA polymerase ECF-type sigma factor	cofit	40	82
	Caulobacter crescentus NA1000	CCNA_03589		RNA polymerase EcfG family sigma factor sigT	strong	37	81
	Caulobacter crescentus NA1000 Δfur	CCNA_03589		RNA polymerase EcfG family sigma factor sigT	cofit	37	81
	Rhodospirillum rubrum S1H	Rru_A3287		Sigma-24 (FecI) (NCBI)	no data	37	86
	Sphingobium sp. HT1-2	GFF2028		hypothetical protein	cofit	37	81
	Rhizobium sp. OAE497	ABIE40_RS20320		sigma-70 family RNA polymerase sigma factor	insig.	38	81
	Azospirillum sp. SherDot2	MPMX19_01371		hypothetical protein	insig.	39	81
	Caulobacter crescentus NA1000	CCNA_02977		RNA polymerase ECF-type sigma factor sigU	strong	37	84
	Caulobacter crescentus NA1000 Δfur	CCNA_02977		RNA polymerase ECF-type sigma factor sigU	cofit	37	84
	Azospirillum brasilense Sp245	AZOBR_RS10625		RNA polymerase sigma-70 factor	insig.	39	80
	Paraburkholderia graminis OAS925	ABIE53_006215		RNA polymerase sigma-70 factor (ECF subfamily)	insig.	33	83
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1476		RNA polymerase sigma factor, sigma-70 family	insig.	31	83
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_19215		RNA polymerase subunit sigma	sig.	33	84
	Burkholderia phytofirmans PsJN	BPHYT_RS24740		RNA polymerase subunit sigma-24	sig.	32	83
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_06547		RNA polymerase sigma-70 factor, ECF subfamily	insig.	32	83
	Paraburkholderia sabiae LMG 24235	QEN71_RS00095		RNA polymerase sigma factor	insig.	32	83
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS16550		RNA polymerase sigma factor	strong	30	80
	Bifidobacterium breve UCC2003	BBR_RS16820		RNA polymerase sigma factor RpoE	strong	31	79
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_10915		RNA polymerase subunit sigma	strong	31	82
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS11995		RNA polymerase subunit sigma	insig.	30	78
	Paraburkholderia graminis OAS925	ABIE53_003919		RNA polymerase sigma-70 factor (ECF subfamily)	insig.	30	87
	Agrobacterium fabrum C58	Atu1485		ECF family sigma factor	insig.	32	77
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_0287		RNA polymerase sigma factor, sigma-70 family	strong	31	79
	Bacteroides thetaiotaomicron VPI-5482	BT1572		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	30	83
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS24230		RNA polymerase sigma factor	strong	30	79
	Bacteroides stercoris CC31F	HMPREF1181_RS16950		RNA polymerase sigma factor	strong	28	84
	Azospirillum brasilense Sp245	AZOBR_RS23735		RNA polymerase	no data	34	84
	Bacteroides ovatus ATCC 8483	BACOVA_03979		Sigma-70 region 2	strong	28	84
	Paraburkholderia sabiae LMG 24235	QEN71_RS23005		sigma-70 family RNA polymerase sigma factor	insig.	33	79
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS12805		RNA polymerase sigma factor	strong	30	78
	Bacteroides ovatus ATCC 8483	BACOVA_04312		Sigma-70 region 2	insig.	29	83
	Paraburkholderia sabiae LMG 24235	QEN71_RS32245		RNA polymerase sigma factor	insig.	32	82
	Sinorhizobium meliloti 1021	SMa0143		RNA polymerase ECF sigma factor	insig.	35	77
	Bacteroides thetaiotaomicron VPI-5482	BT1197		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	28	84
	Bacteroides ovatus ATCC 8483	BACOVA_01848		Sigma-70 region 2	strong	27	84
	Phocaeicola dorei CL03T12C01	ABI39_RS07815		RNA polymerase sigma factor	strong	29	78
	Sphingobium sp. HT1-2	GFF4551		hypothetical protein	cofit	32	80
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_05041		RNA polymerase sigma-70 factor, ECF subfamily	insig.	31	82
	Bacteroides stercoris CC31F	HMPREF1181_RS02840		RNA polymerase sigma factor	sig.	29	78
	Mycobacterium tuberculosis H37Rv	Rv1221		Alternative RNA polymerase sigma factor SigE	insig.	33	77
	Bacteroides thetaiotaomicron VPI-5482	BT2569		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	27	84
	Azospirillum sp. SherDot2	MPMX19_01197		ECF RNA polymerase sigma factor EcfG	insig.	35	77
	Sphingomonas koreensis DSMZ 15582	Ga0059261_1191		RNA polymerase sigma factor, sigma-70 family	insig.	32	77
	Pseudomonas fluorescens FW300-N2C3	AO356_01625		RNA polymerase subunit sigma-24	insig.	32	87
	Cupriavidus basilensis FW507-4G11	RR42_RS32410		RNA polymerase subunit sigma-24	no data	32	82
	Bacteroides thetaiotaomicron VPI-5482	BT3457		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	27	84
	Methylophilus sp. DMC18	GFF2730		RNA polymerase sigma-H factor	no data	32	79
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_2200		RNA polymerase sigma-54 factor RpoN	sig.	33	83
	Bacteroides ovatus ATCC 8483	BACOVA_02205		Sigma-70 region 2	sig.	27	84
	Phocaeicola dorei CL03T12C01	ABI39_RS17450		RNA polymerase sigma factor	strong	27	84
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS03770		RNA polymerase sigma factor	strong	27	84
	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS02635		RNA polymerase sigma factor	insig.	34	77
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF4350		RNA polymerase sigma-54 factor RpoN	insig.	34	84
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_3977		RNA polymerase sigma-54 factor RpoN	insig.	32	83
	Mycobacterium tuberculosis H37Rv	Rv3223c		Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE)	insig.	29	77
	Shewanella sp. ANA-3	Shewana3_3032		RNA polymerase sigma factor RpoE (RefSeq)	no data	33	75
	Shewanella oneidensis MR-1	SO1342	rpoE	RNA polymerase sigma-24 factor (NCBI ptt file)	no data	33	75
	Azospirillum brasilense Sp245	AZOBR_RS14755		RNA polymerase sigma-70 factor	insig.	34	77
	Pseudomonas fluorescens SBW25	PFLU_RS19010		sigma-70 family RNA polymerase sigma factor	insig.	32	84
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS19010		sigma-70 family RNA polymerase sigma factor	sig.	32	84
	Sphingobium sp. HT1-2	GFF1466		RNA polymerase sigma-54 factor RpoN	insig.	31	77
	Pseudomonas fluorescens FW300-N2E3	AO353_20305		RNA polymerase subunit sigma-24	no data	32	83
	Pseudomonas sp. DMC3	GFF1465		ECF RNA polymerase sigma factor EcfG	insig.	31	84
	Pseudomonas orientalis W4I3	QF045_RS18740		sigma-70 family RNA polymerase sigma factor	insig.	31	84
	Burkholderia phytofirmans PsJN	BPHYT_RS08240		RNA polymerase subunit sigma-24	sig.	31	79
	Sphingomonas koreensis DSMZ 15582	Ga0059261_3411		RNA polymerase sigma factor, sigma-70 family	insig.	29	78
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_05124		RNA polymerase sigma-70 factor, ECF subfamily	insig.	31	80
	Mycobacterium tuberculosis H37Rv	Rv2069		RNA polymerase sigma factor, ECF subfamily, SigC	insig.	39	73
	Paraburkholderia graminis OAS925	ABIE53_002425		RNA polymerase sigma-70 factor (ECF subfamily)	insig.	30	80
	Pseudomonas fluorescens GW456-L13	PfGW456L13_2582		RNA polymerase sigma-54 factor RpoN	insig.	32	83
	Rhizobium sp. OAE497	ABIE40_RS22730		RNA polymerase sigma factor	insig.	33	84
	Agrobacterium fabrum C58	Atu2030		ECF family sigma factor	insig.	33	71
	Bacteroides thetaiotaomicron VPI-5482	BT2383		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	28	89
	Phaeobacter inhibens DSM 17395	PGA1_78p00070		'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup'	no data	27	91
	Kangiella aquimarina DSM 16071	B158DRAFT_2180		RNA polymerase, sigma-24 subunit, RpoE	strong	32	75
	Paraburkholderia graminis OAS925	ABIE53_003943		RNA polymerase sigma-70 factor (ECF subfamily)	sig.	30	87
	Variovorax sp. SCN45	GFF215		RNA polymerase sigma-54 factor RpoN	insig.	28	83
	Serratia liquefaciens MT49	IAI46_19585		RNA polymerase sigma factor RpoE	no data	34	71
	Pseudomonas lactucae CFBP13502	GEMAOFIL_03722		ECF RNA polymerase sigma factor EcfG	no data	31	84