| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Agrobacterium fabrum C58 | Atu1625 | | methyltransferase | insig. | 100 | 100 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05988 | | Ubiquinone/menaquinone biosynthesis C-methylase UbiE | no data | 80 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_00315 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 76 | 100 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS16425 | | SAM-dependent methyltransferase | insig. | 80 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2034 | | Methyltransferase | insig. | 78 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS25280 | | class I SAM-dependent methyltransferase | insig. | 74 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4955 | | Methyltransferase | insig. | 76 | 100 |
| o | Sphingobium sp. HT1-2 | GFF450 | | SAM-dependent methyltransferase | cofit | 61 | 99 |
| o | Caulobacter crescentus NA1000 | CCNA_03610 | | methyltransferase | insig. | 42 | 97 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_03610 | | methyltransferase | cofit | 42 | 97 |
| o | Variovorax sp. SCN45 | GFF1219 | | SAM-dependent methyltransferase | insig. | 38 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS28195 | | SAM-dependent methyltransferase | insig. | 38 | 96 |
| o | Variovorax sp. OAS795 | ABID97_RS12270 | | class I SAM-dependent methyltransferase | no data | 34 | 98 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3787 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 34 | 99 |
| o | Pseudomonas sp. S08-1 | OH686_20725 | | SAM-dependent methyltransferase | insig. | 34 | 96 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS03975 | | class I SAM-dependent methyltransferase | insig. | 36 | 84 |
| o | Sinorhizobium meliloti 1021 | SMa0169 | | methyltransferase | insig. | 35 | 90 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2636 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) | insig. | 35 | 89 |
| | Agrobacterium fabrum C58 | Atu0390 | | ubiquinone/menaquinone biosynthesis methyltransferase | insig. | 31 | 68 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4084 | | ubiquinone/menaquinone biosynthesis methyltransferase | insig. | 32 | 63 |
| | Azospirillum sp. SherDot2 | MPMX19_02804 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 32 | 72 |
| | Variovorax sp. OAS795 | ABID97_RS28145 | | methyltransferase domain-containing protein | insig. | 32 | 70 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16515 | | methyltransferase domain-containing protein | insig. | 39 | 48 |
| | Variovorax sp. SCN45 | GFF3185 | | SAM-dependent methyltransferase | insig. | 31 | 63 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS21220 | | class I SAM-dependent methyltransferase | insig. | 33 | 61 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS04095 | | SAM-dependent methyltransferase PhcB | insig. | 31 | 54 |
| | Variovorax sp. OAS795 | ABID97_RS14680 | | methyltransferase domain-containing protein | insig. | 37 | 66 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4022 | | Methyltransferase type 11 | no data | 27 | 76 |
| | Rhizobium sp. OAE497 | ABIE40_RS22315 | | methyltransferase domain-containing protein | insig. | 30 | 62 |
| | Paraburkholderia graminis OAS925 | ABIE53_001057 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 28 | 63 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS28580 | | methyltransferase domain-containing protein | insig. | 31 | 64 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09315 | | hypothetical protein | no data | 37 | 47 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS15935 | | class I SAM-dependent methyltransferase | insig. | 30 | 54 |
| | Variovorax sp. OAS795 | ABID97_RS27290 | | methyltransferase domain-containing protein | insig. | 30 | 69 |
| | Azospirillum sp. SherDot2 | MPMX19_01375 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | no data | 37 | 47 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2743 | | Methyltransferase domain | insig. | 37 | 39 |
| | Enterobacter sp. TBS_079 | MPMX20_03533 | | Trans-aconitate 2-methyltransferase | insig. | 35 | 37 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS11800 | | 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase | strong | 34 | 48 |
| | Variovorax sp. OAS795 | ABID97_RS28555 | | methyltransferase domain-containing protein | insig. | 41 | 37 |
| | Serratia liquefaciens MT49 | IAI46_19810 | | class I SAM-dependent methyltransferase | insig. | 35 | 36 |
| | Sinorhizobium meliloti 1021 | SM_b21433 | | methyl-transferase, S-adenosyl-L-methionine (SAM)-MTase | insig. | 34 | 54 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3946 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 37 | 51 |
| | Pseudomonas sp. DMC3 | GFF787 | | putative methyltransferase YcgJ | cofit | 36 | 51 |
| | Pseudomonas segetis P6 | MPMX49_03072 | | putative methyltransferase YcgJ | insig. | 38 | 47 |
| | Mycobacterium tuberculosis H37Rv | Rv0839 | | Conserved hypothetical protein | insig. | 39 | 34 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_13 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 36 | 51 |
| | Paraburkholderia graminis OAS925 | ABIE53_006338 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 32 | 57 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0596 | | delta(24)-sterol C-methyltransferase | strong | 30 | 58 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3788 | | PUTATIVE METHYLTRANSFERASE | insig. | 38 | 41 |
| o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS06060 | | class I SAM-dependent methyltransferase | insig. | 29 | 84 |
| | Mycobacterium tuberculosis H37Rv | Rv1405c | | Putative methyltransferase | insig. | 33 | 45 |
| | Pseudomonas sp. BP01 | JOY50_RS07515 | | class I SAM-dependent methyltransferase | no data | 32 | 60 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03946 | | putative methyltransferase YcgJ | cofit | 34 | 49 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11170 | | class I SAM-dependent methyltransferase | insig. | 31 | 57 |
| | Pseudomonas sp. RS175 | PFR28_04100 | | Malonyl-[acyl-carrier protein] O-methyltransferase | strong | 36 | 40 |
| | Paraburkholderia graminis OAS925 | ABIE53_001313 | | SAM-dependent methyltransferase | sig. | 36 | 40 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_14150 | | malonyl-[acyl-carrier protein] O-methyltransferase BioC | strong | 38 | 36 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS29785 | | methyltransferase domain-containing protein | no data | 35 | 48 |
| | Sinorhizobium meliloti 1021 | SMc01426 | | hypothetical protein | insig. | 35 | 39 |
| | Sinorhizobium meliloti 1021 | SM_b20059 | | SAM-dependent methyltransferase | insig. | 31 | 55 |
| | Dechlorosoma suillum PS | Dsui_0861 | | ubiquinone/menaquinone biosynthesis methyltransferase | no data | 31 | 49 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS12085 | | class I SAM-dependent methyltransferase | insig. | 27 | 78 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1562 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 32 | 49 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_12380 | | ubiquinone biosynthesis methyltransferase UbiE | no data | 32 | 49 |
| | Pseudomonas sp. SVBP6 | COO64_RS23350 | | class I SAM-dependent methyltransferase | insig. | 32 | 57 |
| | Bosea sp. OAE506 | ABIE41_RS01440 | | methyltransferase domain-containing protein | insig. | 37 | 40 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05895 | | Methylase involved in ubiquinone/menaquinone biosynthesis | no data | 31 | 57 |
| | Paraburkholderia graminis OAS925 | ABIE53_001332 | | sarcosine/dimethylglycine N-methyltransferase | insig. | 39 | 34 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4023 | | PUTATIVE METHYLTRANSFERASE | insig. | 37 | 41 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1099 | ubiE | ubiquinone/menaquinone biosynthesis methyltransferase | strong | 35 | 39 |
| | Klebsiella michiganensis M5al | BWI76_RS19545 | | type 11 methyltransferase | no data | 33 | 37 |
| | Pseudomonas putida KT2440 | PP_1987 | | Methlytransferase, UbiE/COQ5 family | insig. | 32 | 51 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS22520 | bioC;go_function=malonyl-CoA | malonyl-ACP O-methyltransferase BioC | no data | 42 | 35 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS36810 | bioC;go_function=malonyl-CoA | malonyl-ACP O-methyltransferase BioC | insig. | 42 | 35 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21410 | | SAM-dependent methyltransferase | cofit | 34 | 51 |
| | Erwinia amylovora T8 | OLJFJH_16750 | | malonyl-ACP O-methyltransferase BioC | insig. | 33 | 40 |
| | Pseudomonas sp. DMC3 | GFF3076 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 32 | 49 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS21105 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase | insig. | 30 | 58 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22920 | | malonyl-ACP O-methyltransferase BioC | strong | 42 | 35 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4763 | | Biotin synthesis protein BioC | strong | 38 | 35 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_65 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 37 | 47 |
| | Pseudomonas simiae WCS417 | PS417_18590 | | SAM-dependent methyltransferase | sig. | 34 | 49 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4794 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 33 | 50 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS01330 | | class I SAM-dependent methyltransferase | sig. | 43 | 35 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_15870 | | SAM-dependent methyltransferase | sig. | 43 | 35 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS34225 | | class I SAM-dependent methyltransferase | sig. | 43 | 35 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS24960 | | class I SAM-dependent methyltransferase | insig. | 34 | 40 |
| | Acinetobacter baumannii LAC-4 | RR41_RS17230 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 34 | 38 |
| | Pseudomonas sp. S08-1 | OH686_10145 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 34 | 38 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_20630 | | SAM-dependent methyltransferase | cofit | 34 | 51 |
| | Rhodopseudomonas palustris CGA009 | TX73_006705 | | class I SAM-dependent methyltransferase | no data | 33 | 46 |
| | Acinetobacter radioresistens SK82 | MPMX26_00267 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | no data | 31 | 47 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 25 | 69 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02005 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 35 | 34 |
| | Pseudomonas stutzeri RCH2 | Psest_3940 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 26 | 60 |
| | Marinobacter adhaerens HP15 | HP15_2483 | | protein containing methyltransferase type 11 domain | insig. | 36 | 33 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1255 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 26 | 62 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_299 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 32 | 49 |
| | Pseudomonas orientalis W4I3 | QF045_RS20730 | | class I SAM-dependent methyltransferase | cofit | 37 | 35 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0389 | | 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase | no data | 26 | 74 |