Homologs of AMB_RS07010 from Magnetospirillum magneticum AMB-1

ATP-dependent helicase
SEED: ATP-dependent RNA helicase Atu1833

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Magnetospirillum magneticum AMB-1 AMB_RS07010 ATP-dependent helicase strong 100 100
  Rhodospirillum rubrum S1H Rru_A2718 DEAD/DEAH box helicase (NCBI) no data 59 91
o Azospirillum brasilense Sp245 AZOBR_RS22205 DNA helicase strong 60 94
  Azospirillum sp. SherDot2 MPMX19_00976 ATP-dependent RNA helicase RhlE insig. 70 66
o Xanthobacter sp. DMC5 GFF1339 ATP-dependent RNA helicase RhlE insig. 55 82
o Phaeobacter inhibens DSM 17395 PGA1_c10590 putative ATP-dependent RNA helicase RhlE insig. 50 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1574 Superfamily II DNA and RNA helicases strong 60 72
  Dinoroseobacter shibae DFL-12 Dshi_1333 DEAD/DEAH box helicase domain protein (RefSeq) strong 61 67
  Agrobacterium fabrum C58 Atu1833 ATP-dependent RNA helicase no data 60 69
  Sphingobium sp. HT1-2 GFF3480 ATP-dependent RNA helicase Atu1833 cofit 62 65
o Sinorhizobium meliloti 1021 SMc00522 ATP-dependent RNA helicase strong 54 83
  Bosea sp. OAE506 ABIE41_RS16930 DEAD/DEAH box helicase strong 63 65
  Rhodopseudomonas palustris CGA009 TX73_012805 DEAD/DEAH box helicase strong 61 66
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04615 DEAD/DEAH box helicase insig. 57 66
  Caulobacter crescentus NA1000 CCNA_01923 ATP-dependent RNA helicase strong 57 65
  Caulobacter crescentus NA1000 Δfur CCNA_01923 ATP-dependent RNA helicase cofit 57 65
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 47 79
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 52 64
  Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 50 67
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 48 74
  Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 45 80
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 52 64
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 41 85
  Acidovorax sp. GW101-3H11 Ac3H11_1125 ATP-dependent RNA helicase Bcep18194_A5658 no data 48 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 52 65
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 49 67
  Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 41 85
  Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 48 66
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03650 ATP-dependent helicase insig. 49 67
  Ralstonia solanacearum UW163 UW163_RS10020 ATP-dependent helicase insig. 49 67
  Ralstonia solanacearum GMI1000 RS_RS11095 ATP-dependent helicase sig. 49 67
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 45 72
  Variovorax sp. SCN45 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 strong 50 65
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 47 66
  Variovorax sp. OAS795 ABID97_RS22030 DEAD/DEAH box helicase strong 49 65
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16030 DEAD/DEAH box helicase insig. 48 65
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_19640 rhlE ATP-dependent RNA helicase RhlE cofit 46 72
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16115 DEAD/DEAH box helicase sig. 47 65
  Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 46 72
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 42 74
  Phocaeicola dorei CL03T12C01 ABI39_RS02170 DEAD/DEAH box helicase insig. 45 73
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 47 68
  Methylophilus sp. DMC18 GFF250 ATP-dependent RNA helicase RhlE insig. 43 77
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 47 66
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 49 66
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03875 ATP-dependent RNA helicase RhlE cofit 48 66
  Variovorax sp. OAS795 ABID97_RS21170 DEAD/DEAH box helicase sig. 48 66
  Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 48 66
  Variovorax sp. SCN45 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) insig. 47 66
  Acidovorax sp. GW101-3H11 Ac3H11_386 ATP-dependent RNA helicase RhlE insig. 47 66
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 42 74
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01200 DEAD/DEAH box helicase insig. 48 65
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02855 DEAD/DEAH box helicase sig. 45 73
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02916 ATP-dependent RNA helicase RhlE insig. 47 66
  Lysobacter sp. OAE881 ABIE51_RS06650 DEAD/DEAH box helicase insig. 45 71
  Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 49 64
  Erwinia amylovora T8 OLJFJH_16685 ATP-dependent RNA helicase RhlE cofit 47 66
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE insig. 47 66
  Vibrio cholerae E7946 ATCC 55056 CSW01_15010 ATP-dependent RNA helicase RhlE insig. 46 66
  Dickeya dianthicola ME23 DZA65_RS09075 ATP-dependent RNA helicase RhlE insig. 44 74
  Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 47 66
  Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 47 66
  Dickeya dianthicola 67-19 HGI48_RS08785 ATP-dependent RNA helicase RhlE cofit 44 74
  Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 47 66
  Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE insig. 47 66
  Escherichia coli ECRC100 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE cofit 47 66
  Escherichia coli ECRC101 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE insig. 47 66
  Escherichia coli ECRC102 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE cofit 47 66
  Escherichia coli ECRC62 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE insig. 47 66
  Escherichia coli ECRC98 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE sig. 47 66
  Escherichia coli ECRC99 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE no data 47 66
  Escherichia coli Nissle 1917 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE insig. 47 66
  Escherichia coli BW25113 b0797 rhlE RNA helicase (NCBI) sig. 47 66
  Rahnella sp. WP5 EX31_RS23775 ATP-dependent RNA helicase RhlE insig. 47 66
  Escherichia fergusonii Becca EFB2_03308 ATP-dependent RNA helicase RhlE insig. 47 66
  Klebsiella pneumoniae MKP103 KDGMDA_17180 ATP-dependent RNA helicase RhlE sig. 47 66
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3530 ATP-dependent RNA helicase RhlE cofit 48 65
  Serratia liquefaciens MT49 IAI46_06620 ATP-dependent RNA helicase RhlE insig. 46 69
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 44 71
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 44 74
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14745 DEAD/DEAH box helicase no data 45 66
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 48 65
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 46 66
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02200 DEAD/DEAH box helicase insig. 46 66
  Bacteroides stercoris CC31F HMPREF1181_RS03715 DEAD/DEAH box helicase insig. 45 65
  Pectobacterium carotovorum WPP14 HER17_RS13325 ATP-dependent RNA helicase RhlE insig. 46 66
  Castellaniella sp019104865 MT123 ABCV34_RS07925 DEAD/DEAH box helicase cofit 47 65
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 44 74
  Pseudomonas stutzeri RCH2 Psest_0312 Superfamily II DNA and RNA helicases strong 41 81
  Pseudomonas syringae pv. syringae B728a Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 41 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 41 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 47 66
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 40 84
  Azospirillum sp. SherDot2 MPMX19_02097 ATP-dependent RNA helicase RhlE insig. 47 65
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 47 66
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 47 66
  Bosea sp. OAE506 ABIE41_RS22380 DEAD/DEAH box helicase insig. 40 84
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 39 84
  Sinorhizobium meliloti 1021 SM_b20880 ATP-dependent RNA helicase strong 43 87
  Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 42 75