Homologs of Sama_3469 from Shewanella amazonensis SB2B

hypothetical protein (RefSeq)
SEED: 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)
KEGG: ribosomal RNA small subunit methyltransferase D

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella amazonensis SB2B Sama_3469 hypothetical protein (RefSeq) strong 100 100
o Shewanella sp. ANA-3 Shewana3_3973 putative methyltransferase (RefSeq) strong 66 97
o Shewanella loihica PV-4 Shew_3607 putative methyltransferase (RefSeq) strong 72 89
o Shewanella oneidensis MR-1 SO4587 conserved hypothetical protein TIGR00095 (NCBI ptt file) strong 68 88
o Dickeya dianthicola 67-19 HGI48_RS20760 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 57 89
o Dickeya dadantii 3937 DDA3937_RS00630 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 56 89
o Dickeya dianthicola ME23 DZA65_RS21770 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 56 89
o Klebsiella michiganensis M5al BWI76_RS26405 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 58 93
o Pectobacterium carotovorum WPP14 HER17_RS00465 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 57 89
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00238 Ribosomal RNA small subunit methyltransferase D cofit 55 92
o Pantoea sp. MT58 IAI47_01535 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 57 93
o Escherichia fergusonii Becca EFB2_00351 Ribosomal RNA small subunit methyltransferase D cofit 55 92
o Escherichia coli ECOR38 HEPCGN_15525 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase strong 55 92
o Escherichia coli ECOR27 NOLOHH_08500 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase strong 55 92
o Escherichia coli ECRC62 BNILDI_03015 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 55 92
o Escherichia coli Nissle 1917 ECOLIN_RS19815 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 55 92
o Escherichia coli BW25113 b3465 yhhF predicted methyltransferase (NCBI) strong 55 92
o Escherichia coli BL21 ECD_03314 16S rRNA m(2)G966 methyltransferase, SAM-dependent cofit 55 92
o Escherichia coli ECRC100 OKFHMN_16695 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 55 92
o Escherichia coli ECRC101 MCAODC_07225 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 55 92
o Escherichia coli ECRC102 NIAGMN_14465 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 55 92
o Escherichia coli ECRC98 JDDGAC_20325 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 55 92
o Escherichia coli ECRC99 KEDOAH_11445 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase no data 55 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF540 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) insig. 57 93
o Enterobacter sp. TBS_079 MPMX20_04342 Ribosomal RNA small subunit methyltransferase D sig. 57 89
o Enterobacter asburiae PDN3 EX28DRAFT_4299 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 57 87
o Vibrio cholerae E7946 ATCC 55056 CSW01_00740 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 52 86
o Rahnella sp. WP5 EX31_RS14835 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 53 90
o Erwinia tracheiphila SCR3 LU632_RS19285 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 50 93
o Serratia liquefaciens MT49 IAI46_00920 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 54 91
o Alteromonas macleodii MIT1002 MIT1002_03683 Ribosomal RNA small subunit methyltransferase D sig. 46 94
o Pseudomonas stutzeri RCH2 Psest_0255 RNA methyltransferase, RsmD family no data 47 91
o Pseudomonas fluorescens GW456-L13 PfGW456L13_990 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) sig. 48 87
o Kangiella aquimarina DSM 16071 B158DRAFT_0443 16S rRNA m(2)G-966 methyltransferase (EC 2.1.1.52) sig. 42 96
o Pseudomonas syringae pv. syringae B728a Psyr_4754 16S rRNA m(2)G-966 methyltransferase insig. 47 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4754 16S rRNA m(2)G-966 methyltransferase insig. 47 90
o Pseudomonas sp. RS175 PFR28_04262 Ribosomal RNA small subunit methyltransferase D strong 47 87
o Pseudomonas sp. S08-1 OH686_14220 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD cofit 45 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) strong 47 87
o Pseudomonas fluorescens FW300-N2C3 AO356_13320 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 47 87
o Marinobacter adhaerens HP15 HP15_3491 conserved hypothetical protein sig. 47 96
o Pseudomonas simiae WCS417 PS417_26825 16S rRNA methyltransferase no data 45 87
o Pseudomonas putida KT2440 PP_5114 putative adenine methyltransferase strong 45 91
o Pseudomonas fluorescens FW300-N2E3 AO353_08265 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 45 87
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2320 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) no data 46 87
o Pseudomonas fluorescens SBW25 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 45 87
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 45 87
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2153.1 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) sig. 41 91
o Lysobacter sp. OAE881 ABIE51_RS15125 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 42 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19990 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 44 86
o Rhodanobacter sp. FW510-T8 OKGIIK_02580 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD cofit 43 87
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11070 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 40 91
o Ralstonia solanacearum UW163 UW163_RS02510 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD no data 40 91
o Burkholderia phytofirmans PsJN BPHYT_RS02815 methyltransferase sig. 41 94
o Rhodanobacter denitrificans MT42 LRK55_RS13080 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 43 86
o Acinetobacter radioresistens SK82 MPMX26_02312 Ribosomal RNA small subunit methyltransferase D cofit 42 83
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13340 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 43 86
o Ralstonia solanacearum GMI1000 RS_RS01920 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 41 91
o Dechlorosoma suillum PS Dsui_1027 RNA methyltransferase, RsmD family insig. 43 88
o Paraburkholderia sabiae LMG 24235 QEN71_RS01665 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 42 98
o Ralstonia solanacearum PSI07 RPSI07_RS22230 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 40 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01968 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 39 95
o Paraburkholderia graminis OAS925 ABIE53_000701 16S rRNA (guanine966-N2)-methyltransferase sig. 39 94
o Cupriavidus basilensis FW507-4G11 RR42_RS01990 methyltransferase insig. 41 84
o Ralstonia sp. UNC404CL21Col ABZR87_RS06960 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 38 97
o Herbaspirillum seropedicae SmR1 HSERO_RS20695 methyltransferase sig. 40 97
o Rhodopseudomonas palustris CGA009 TX73_005985 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 40 87
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF817 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) cofit 42 86
o Acidovorax sp. GW101-3H11 Ac3H11_3873 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) no data 40 86
o Bosea sp. OAE506 ABIE41_RS23215 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 40 87
o Castellaniella sp019104865 MT123 ABCV34_RS10145 RsmD family RNA methyltransferase cofit 39 88
o Sinorhizobium meliloti 1021 SMc00902 hypothetical protein no data 37 86
o Variovorax sp. OAS795 ABID97_RS23860 RsmD family RNA methyltransferase strong 39 91
  Caulobacter crescentus NA1000 CCNA_00227 methyltransferase strong 38 70
  Caulobacter crescentus NA1000 Δfur CCNA_00227 methyltransferase insig. 38 70
o Desulfovibrio vulgaris Miyazaki F DvMF_0172 methyltransferase (RefSeq) sig. 39 82
o Rhizobium sp. OAE497 ABIE40_RS03765 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 33 86
o Phaeobacter inhibens DSM 17395 PGA1_c29260 ribosomal RNA small subunit methyltransferase D sig. 40 85
o Azospirillum brasilense Sp245 AZOBR_RS04500 methyltransferase no data 34 86
o Mycobacterium tuberculosis H37Rv Rv2966c Possible methyltransferase (methylase) no data 37 85
o Variovorax sp. SCN45 GFF2320 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) insig. 41 63
o Azospirillum sp. SherDot2 MPMX19_01626 Ribosomal RNA small subunit methyltransferase D no data 36 82
o Agrobacterium fabrum C58 Atu0690 hypothetical protein sig. 33 86
o Rhodospirillum rubrum S1H Rru_A0653 hypothetical protein (NCBI) no data 35 85
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04215 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 32 86
o Magnetospirillum magneticum AMB-1 AMB_RS20860 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD cofit 34 84
o Desulfovibrio vulgaris Hildenborough JW710 DVU1531 methyltransferase, putative (TIGR) sig. 36 82
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0246 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 37 71
  Dinoroseobacter shibae DFL-12 Dshi_0115 putative methyltransferase (RefSeq) strong 35 75
  Synechococcus elongatus PCC 7942 Synpcc7942_1480 hypothetical protein strong 37 70
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12725 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 32 79
  Bacteroides stercoris CC31F HMPREF1181_RS09245 RsmD family RNA methyltransferase insig. 34 70
  Fusobacterium nucleatum SB010 HUW76_03595 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 33 70
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS04100 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 28 85
  Bifidobacterium breve UCC2003 BBR_RS19290 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 38 62
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14025 RsmD family RNA methyltransferase sig. 28 70
  Phocaeicola dorei CL03T12C01 ABI39_RS09675 RsmD family RNA methyltransferase insig. 27 70
  Bacteroides thetaiotaomicron VPI-5482 BT3979 putative methyltransferase (NCBI ptt file) sig. 28 70
  Bacteroides ovatus ATCC 8483 BACOVA_04638 putative RNA methyltransferase, RsmD family insig. 28 70
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07045 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 32 72