Conservation of cofitness between Xcc-8004.4073.1 and Xcc-8004.2316.1 in Xanthomonas campestris pv. campestris strain 8004

97 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) 1.0 Xcc-8004.2316.1 N-acetylornithine carbamoyltransferase (EC 2.1.3.9) 0.79 10
Lysobacter sp. OAE881 0.82 ABIE51_RS06180 amidophosphoribosyltransferase 0.90 ABIE51_RS13410 N-acetylornithine carbamoyltransferase low > 62
Dyella japonica UNC79MFTsu3.2 0.73 ABZR86_RS06775 amidophosphoribosyltransferase 0.82 ABZR86_RS08730 N-acetylornithine carbamoyltransferase 0.95 31
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_05570 purF amidophosphoribosyltransferase 0.81 OKGIIK_09480 argF N-acetylornithine carbamoyltransferase low > 52
Rhodanobacter denitrificans MT42 0.71 LRK55_RS01105 amidophosphoribosyltransferase 0.81 LRK55_RS02170 N-acetylornithine carbamoyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS01340 amidophosphoribosyltransferase 0.81 LRK54_RS02415 N-acetylornithine carbamoyltransferase 0.71 19
Pseudomonas sp. S08-1 0.65 OH686_04420 amidophosphoribosyltransferase 0.17 OH686_20405 ornithine carbamoyltransferase — —
Pseudomonas putida KT2440 0.64 PP_2000 amidophosphoribosyl transferase 0.17 PP_1000 ornithine carbamoyltransferase, catabolic low > 96
Pseudomonas sp. RS175 0.64 PFR28_02811 Amidophosphoribosyltransferase 0.17 PFR28_03363 Ornithine carbamoyltransferase 1, anabolic 0.46 32
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.17 PfGW456L13_1873 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS20515 amidophosphoribosyltransferase 0.17 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas simiae WCS417 0.64 PS417_18535 amidophosphoribosyltransferase 0.16 PS417_22335 ornithine carbamoyltransferase — —
Pseudomonas fluorescens SBW25 0.64 PFLU_RS20515 amidophosphoribosyltransferase 0.17 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas stutzeri RCH2 0.64 Psest_2579 amidophosphoribosyltransferase 0.17 Psest_1291 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_20690 amidophosphoribosyltransferase 0.17 AO353_04155 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.17 Pf6N2E2_5579 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_21465 amidophosphoribosyltransferase 0.17 AO356_05275 ornithine carbamoyltransferase low > 104
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) 0.70 B158DRAFT_1975 Ornithine carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_1668 amidophosphoribosyltransferase 0.16 Psyr_3901 ornithine carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_1668 amidophosphoribosyltransferase 0.16 Psyr_3901 ornithine carbamoyltransferase — —
Shewanella loihica PV-4 0.62 Shew_2302 amidophosphoribosyltransferase (RefSeq) 0.18 Shew_0204 ornithine carbamoyltransferase (RefSeq) low > 60
Marinobacter adhaerens HP15 0.62 HP15_1821 amidophosphoribosyltransferase 0.19 HP15_3987 ornithine carbamoyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_05115 amidophosphoribosyltransferase 0.17 CSW01_12720 ornithine carbamoyltransferase low > 62
Shewanella amazonensis SB2B 0.61 Sama_2146 amidophosphoribosyltransferase (RefSeq) 0.20 Sama_0258 ornithine carbamoyltransferase (RefSeq) 0.78 39
Erwinia tracheiphila SCR3 0.61 LU632_RS07865 purF amidophosphoribosyltransferase 0.18 LU632_RS20900 argF ornithine carbamoyltransferase 0.58 74
Shewanella sp. ANA-3 0.61 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) 0.20 Shewana3_3903 ornithine carbamoyltransferase (RefSeq) 0.84 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.18 GFF940 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 78
Serratia liquefaciens MT49 0.61 IAI46_17810 amidophosphoribosyltransferase 0.16 IAI46_02320 ornithine carbamoyltransferase low > 86
Pantoea sp. MT58 0.61 IAI47_06275 amidophosphoribosyltransferase 0.18 IAI47_16830 ornithine carbamoyltransferase 0.69 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_01393 Amidophosphoribosyltransferase 0.19 OHPLBJKB_03782 Ornithine carbamoyltransferase subunit I low > 73
Escherichia coli ECRC62 0.61 BNILDI_13255 purF amidophosphoribosyltransferase 0.19 BNILDI_07425 argF ornithine carbamoyltransferase low > 75
Escherichia coli ECRC98 0.61 JDDGAC_26675 purF amidophosphoribosyltransferase 0.19 JDDGAC_15475 argF ornithine carbamoyltransferase low > 86
Escherichia coli ECRC101 0.61 MCAODC_13755 purF amidophosphoribosyltransferase 0.19 MCAODC_02340 argF ornithine carbamoyltransferase low > 87
Escherichia coli ECRC102 0.61 NIAGMN_20485 purF amidophosphoribosyltransferase 0.19 NIAGMN_09685 argF ornithine carbamoyltransferase — —
Escherichia coli ECRC99 0.61 KEDOAH_05480 purF amidophosphoribosyltransferase 0.19 KEDOAH_16320 argF ornithine carbamoyltransferase — —
Escherichia fergusonii Becca 0.61 EFB2_01546 Amidophosphoribosyltransferase 0.19 EFB2_04281 Ornithine carbamoyltransferase subunit I low > 86
Escherichia coli ECRC100 0.61 OKFHMN_22715 purF amidophosphoribosyltransferase 0.19 OKFHMN_11835 argF ornithine carbamoyltransferase low > 80
Escherichia coli Nissle 1917 0.61 ECOLIN_RS13405 amidophosphoribosyltransferase 0.19 ECOLIN_RS24665 ornithine carbamoyltransferase — —
Escherichia coli ECOR38 0.61 HEPCGN_21910 purF amidophosphoribosyltransferase 0.19 HEPCGN_10025 argF ornithine carbamoyltransferase low > 87
Escherichia coli BW25113 0.60 b2312 purF amidophosphoribosyltransferase (NCBI) 0.19 b4254 argI ornithine carbamoyltransferase 1 (NCBI) low > 76
Escherichia coli ECOR27 0.60 NOLOHH_14335 purF amidophosphoribosyltransferase 0.19 NOLOHH_04090 argF ornithine carbamoyltransferase low > 75
Escherichia coli BL21 0.60 ECD_02237 amidophosphoribosyltransferase 0.19 ECD_04120 ornithine carbamoyltransferase 1 0.54 52
Klebsiella michiganensis M5al 0.60 BWI76_RS20350 amidophosphoribosyltransferase 0.20 BWI76_RS03010 ornithine carbamoyltransferase 0.84 13
Enterobacter sp. TBS_079 0.60 MPMX20_03247 Amidophosphoribosyltransferase 0.19 MPMX20_00556 Ornithine carbamoyltransferase subunit F 0.85 36
Dickeya dadantii 3937 0.60 DDA3937_RS14435 amidophosphoribosyltransferase 0.18 DDA3937_RS01940 ornithine carbamoyltransferase low > 74
Acinetobacter radioresistens SK82 0.60 MPMX26_01122 Amidophosphoribosyltransferase 0.19 MPMX26_01287 Ornithine carbamoyltransferase 1, anabolic low > 36
Pectobacterium carotovorum WPP14 0.60 HER17_RS07020 amidophosphoribosyltransferase 0.18 HER17_RS19500 ornithine carbamoyltransferase low > 75
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) 0.19 EX28DRAFT_3461 ornithine carbamoyltransferase low > 76
Rahnella sp. WP5 0.60 EX31_RS19570 amidophosphoribosyltransferase 0.18 EX31_RS12800 ornithine carbamoyltransferase low > 89
Shewanella oneidensis MR-1 0.60 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) 0.21 SO0277 argF ornithine carbamoyltransferase (NCBI ptt file) 0.82 60
Dickeya dianthicola 67-19 0.60 HGI48_RS14405 amidophosphoribosyltransferase 0.18 HGI48_RS01915 ornithine carbamoyltransferase 0.67 29
Dickeya dianthicola ME23 0.60 DZA65_RS15335 amidophosphoribosyltransferase 0.18 DZA65_RS01985 ornithine carbamoyltransferase 0.80 11
Alteromonas macleodii MIT1002 0.59 MIT1002_02524 Amidophosphoribosyltransferase 0.17 MIT1002_00469 Ornithine carbamoyltransferase 0.97 16
Dechlorosoma suillum PS 0.58 Dsui_3186 amidophosphoribosyltransferase 0.18 Dsui_3249 ornithine carbamoyltransferase — —
Paraburkholderia graminis OAS925 0.58 ABIE53_004816 amidophosphoribosyltransferase 0.20 ABIE53_003354 ornithine carbamoyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_06060 amidophosphoribosyltransferase 0.20 H281DRAFT_04119 ornithine carbamoyltransferase 0.46 25
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS33840 amidophosphoribosyltransferase 0.19 BPHYT_RS15915 ornithine carbamoyltransferase 0.84 24
Ralstonia solanacearum GMI1000 0.57 RS_RS09930 amidophosphoribosyltransferase 0.16 RS_RS12805 ornithine carbamoyltransferase — —
Ralstonia solanacearum UW163 0.57 UW163_RS11175 amidophosphoribosyltransferase 0.17 UW163_RS08440 ornithine carbamoyltransferase — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS02550 amidophosphoribosyltransferase 0.17 RALBFv3_RS05185 ornithine carbamoyltransferase — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS14765 amidophosphoribosyltransferase 0.17 RPSI07_RS12115 ornithine carbamoyltransferase — —
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS14465 amidophosphoribosyltransferase 0.17 ABZR87_RS00840 ornithine carbamoyltransferase — —
Castellaniella sp019104865 MT123 0.56 ABCV34_RS04130 amidophosphoribosyltransferase 0.19 ABCV34_RS05380 ornithine carbamoyltransferase — —
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS14325 amidophosphoribosyltransferase 0.19 RR42_RS17175 ornithine carbamoyltransferase — —
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS17680 amidophosphoribosyltransferase 0.19 QEN71_RS02785 ornithine carbamoyltransferase 0.78 44
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.18 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS16445 amidophosphoribosyltransferase 0.17 HSERO_RS07185 Ornithine carbamoyltransferase (EC 2.1.3.3) (from data) — —
Acidovorax sp. GW101-3H11 0.54 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.18 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Variovorax sp. OAS795 0.52 ABID97_RS21635 amidophosphoribosyltransferase 0.18 ABID97_RS08630 ornithine carbamoyltransferase — —
Variovorax sp. SCN45 0.52 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.19 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Methanococcus maripaludis JJ 0.34 MMJJ_RS08440 amidophosphoribosyltransferase 0.21 MMJJ_RS02150 ornithine carbamoyltransferase — —
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_0004 purF amidophosphoribosyltransferase 0.20 Synpcc7942_2514 argF ornithine carbamoyltransferase — —
Methanococcus maripaludis S2 0.32 MMP_RS05915 amidophosphoribosyltransferase 0.21 MMP_RS02925 ornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_01730 amidophosphoribosyltransferase 0.18 CCNA_02325 ornithine carbamoyltransferase low > 67
Caulobacter crescentus NA1000 0.31 CCNA_01730 amidophosphoribosyltransferase 0.18 CCNA_02325 ornithine carbamoyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU0161 purF amidophosphoribosyltransferase (TIGR) 0.16 DVU1096 argF ornithine carbamoyltransferase (TIGR) — —
Rhodospirillum rubrum S1H 0.30 Rru_A0404 Amidophosphoribosyl transferase (NCBI) 0.21 Rru_A3276 Ornithine carbamoyltransferase (NCBI) low > 58
Mycobacterium tuberculosis H37Rv 0.30 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase) 0.19 Rv1656 Probable ornithine carbamoyltransferase, anabolic ArgF — —
Bosea sp. OAE506 0.30 ABIE41_RS17810 amidophosphoribosyltransferase 0.20 ABIE41_RS04335 ornithine carbamoyltransferase — —
Bifidobacterium breve UCC2003 0.30 BBR_RS13380 amidophosphoribosyltransferase 0.20 BBR_RS13905 ornithine carbamoyltransferase low > 34
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_2307 amidophosphoribosyltransferase (RefSeq) 0.18 DvMF_0046 ornithine carbamoyltransferase (RefSeq) 0.79 14
Azospirillum sp. SherDot2 0.30 MPMX19_00906 Amidophosphoribosyltransferase 0.20 MPMX19_02178 Ornithine carbamoyltransferase, anabolic — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_2132 amidophosphoribosyltransferase (RefSeq) 0.21 Dshi_0796 ornithine carbamoyltransferase (RefSeq) 0.84 12
Azospirillum brasilense Sp245 0.29 AZOBR_RS08310 amidophosphoribosyltransferase 0.22 AZOBR_RS19030 ornithine carbamoyltransferase — —
Rhodopseudomonas palustris CGA009 0.29 TX73_015990 amidophosphoribosyltransferase 0.20 TX73_024805 ornithine carbamoyltransferase — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c10810 amidophosphoribosyltransferase PurF 0.23 PGA1_c24220 ornithine carbamoyltransferase ArgF 0.68 49
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS03735 amidophosphoribosyltransferase 0.19 A4249_RS11920 ornithine carbamoyltransferase — —
Rhizobium sp. OAE497 0.28 ABIE40_RS06270 amidophosphoribosyltransferase 0.23 ABIE40_RS02325 ornithine carbamoyltransferase 0.91 10
Agrobacterium fabrum C58 0.28 Atu1075 amidophosphoribosyltransferase 0.23 Atu0429 ornithine carbamoyltransferase — —
Magnetospirillum magneticum AMB-1 0.28 AMB_RS10545 amidophosphoribosyltransferase 0.20 AMB_RS01610 ornithine carbamoyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) 0.17 Ga0059261_3206 ornithine carbamoyltransferase — —
Sinorhizobium meliloti 1021 0.27 SMc00554 amidophosphoribosyltransferase 0.20 SMc02137 ornithine carbamoyltransferase 0.92 39
Parabacteroides merdae CL09T00C40 0.12 HMPREF1078_RS10430 amidophosphoribosyltransferase 0.27 HMPREF1078_RS10660 acetylornithine carbamoyltransferase low > 61
Bacteroides ovatus ATCC 8483 0.12 BACOVA_05376 putative amidophosphoribosyltransferase 0.27 BACOVA_03533 N-acetylornithine carbamoyltransferase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.11 BT4582 amidophosphoribosyltransferase precursor (NCBI ptt file) 0.27 BT3717 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) low > 81
Phocaeicola dorei CL03T12C01 0.11 ABI39_RS18960 amidophosphoribosyltransferase 0.25 ABI39_RS02870 acetylornithine carbamoyltransferase low > 72
Phocaeicola vulgatus CL09T03C04 0.11 HMPREF1058_RS04675 amidophosphoribosyltransferase 0.25 HMPREF1058_RS08640 acetylornithine carbamoyltransferase low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.11 Echvi_4653 Glutamine phosphoribosylpyrophosphate amidotransferase 0.28 Echvi_3849 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) — —

Not shown: 1 genomes with orthologs for Xcc-8004.4073.1 only; 5 genomes with orthologs for Xcc-8004.2316.1 only