Conservation of cofitness between Xcc-8004.2326.1 and Xcc-8004.2316.1 in Xanthomonas campestris pv. campestris strain 8004

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 1.0 Xcc-8004.2316.1 N-acetylornithine carbamoyltransferase (EC 2.1.3.9) 0.67 12
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS02375 glutamate 5-kinase 0.81 LRK54_RS02415 N-acetylornithine carbamoyltransferase 0.68 33
Rhodanobacter denitrificans MT42 0.59 LRK55_RS02130 glutamate 5-kinase 0.81 LRK55_RS02170 N-acetylornithine carbamoyltransferase low > 63
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_09420 proB glutamate 5-kinase 0.81 OKGIIK_09480 argF N-acetylornithine carbamoyltransferase low > 52
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS08685 glutamate 5-kinase 0.82 ABZR86_RS08730 N-acetylornithine carbamoyltransferase 0.87 28
Lysobacter sp. OAE881 0.53 ABIE51_RS13370 glutamate 5-kinase 0.90 ABIE51_RS13410 N-acetylornithine carbamoyltransferase 0.83 23
Alteromonas macleodii MIT1002 0.42 MIT1002_04056 Glutamate 5-kinase 0.17 MIT1002_00469 Ornithine carbamoyltransferase low > 70
Shewanella amazonensis SB2B 0.38 Sama_2516 gamma-glutamyl kinase (RefSeq) 0.20 Sama_0258 ornithine carbamoyltransferase (RefSeq) 0.93 29
Ralstonia solanacearum UW163 0.37 UW163_RS07480 glutamate 5-kinase 0.17 UW163_RS08440 ornithine carbamoyltransferase — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS06145 glutamate 5-kinase 0.17 RALBFv3_RS05185 ornithine carbamoyltransferase — —
Shewanella loihica PV-4 0.36 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.18 Shew_0204 ornithine carbamoyltransferase (RefSeq) 0.98 21
Serratia liquefaciens MT49 0.36 IAI46_04430 glutamate 5-kinase 0.16 IAI46_02320 ornithine carbamoyltransferase 0.80 4
Rahnella sp. WP5 0.36 EX31_RS20980 glutamate 5-kinase 0.18 EX31_RS12800 ornithine carbamoyltransferase low > 89
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS01810 glutamate 5-kinase 0.17 ABZR87_RS00840 ornithine carbamoyltransferase — —
Shewanella sp. ANA-3 0.36 Shewana3_0954 gamma-glutamyl kinase (RefSeq) 0.20 Shewana3_3903 ornithine carbamoyltransferase (RefSeq) 0.90 52
Ralstonia solanacearum GMI1000 0.36 RS_RS14095 glutamate 5-kinase 0.16 RS_RS12805 ornithine carbamoyltransferase — —
Ralstonia solanacearum PSI07 0.36 RPSI07_RS11095 glutamate 5-kinase 0.17 RPSI07_RS12115 ornithine carbamoyltransferase — —
Shewanella oneidensis MR-1 0.36 SO1121 proB glutamate 5-kinase (NCBI ptt file) 0.21 SO0277 argF ornithine carbamoyltransferase (NCBI ptt file) 0.95 30
Escherichia coli ECRC99 0.36 KEDOAH_18480 proB Glutamate 5-kinase 0.19 KEDOAH_16320 argF ornithine carbamoyltransferase — —
Escherichia coli ECRC101 0.36 MCAODC_00195 proB Glutamate 5-kinase 0.19 MCAODC_02340 argF ornithine carbamoyltransferase 0.87 30
Castellaniella sp019104865 MT123 0.36 ABCV34_RS10800 glutamate 5-kinase 0.19 ABCV34_RS05380 ornithine carbamoyltransferase low > 48
Escherichia coli ECOR38 0.36 HEPCGN_07780 proB Glutamate 5-kinase 0.19 HEPCGN_10025 argF ornithine carbamoyltransferase 0.92 46
Escherichia coli BL21 0.36 ECD_00239 gamma-glutamate kinase 0.19 ECD_04120 ornithine carbamoyltransferase 1 0.88 18
Escherichia coli Nissle 1917 0.36 ECOLIN_RS01825 glutamate 5-kinase 0.19 ECOLIN_RS24665 ornithine carbamoyltransferase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_03398 Glutamate 5-kinase 0.19 OHPLBJKB_03782 Ornithine carbamoyltransferase subunit I low > 73
Escherichia coli BW25113 0.36 b0242 proB gamma-glutamyl kinase (NCBI) 0.19 b4254 argI ornithine carbamoyltransferase 1 (NCBI) low > 76
Escherichia coli ECRC102 0.36 NIAGMN_07535 proB Glutamate 5-kinase 0.19 NIAGMN_09685 argF ornithine carbamoyltransferase — —
Klebsiella michiganensis M5al 0.36 BWI76_RS05840 glutamate 5-kinase 0.20 BWI76_RS03010 ornithine carbamoyltransferase 0.89 9
Escherichia coli ECRC62 0.36 BNILDI_00245 proB Glutamate 5-kinase 0.19 BNILDI_07425 argF ornithine carbamoyltransferase 0.98 4
Escherichia fergusonii Becca 0.36 EFB2_03778 Glutamate 5-kinase 0.19 EFB2_04281 Ornithine carbamoyltransferase subunit I low > 86
Escherichia coli ECOR27 0.36 NOLOHH_02050 proB Glutamate 5-kinase 0.19 NOLOHH_04090 argF ornithine carbamoyltransferase 0.96 15
Escherichia coli ECRC98 0.36 JDDGAC_13300 proB Glutamate 5-kinase 0.19 JDDGAC_15475 argF ornithine carbamoyltransferase 0.82 45
Escherichia coli ECRC100 0.36 OKFHMN_09675 proB Glutamate 5-kinase 0.19 OKFHMN_11835 argF ornithine carbamoyltransferase 0.90 54
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS17940 gamma-glutamyl kinase 0.19 RR42_RS17175 ornithine carbamoyltransferase — —
Enterobacter asburiae PDN3 0.35 EX28DRAFT_2651 glutamate 5-kinase 0.19 EX28DRAFT_3461 ornithine carbamoyltransferase 0.76 41
Magnetospirillum magneticum AMB-1 0.35 AMB_RS20630 glutamate 5-kinase 0.20 AMB_RS01610 ornithine carbamoyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.18 GFF940 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 78
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.16 Pf1N1B4_762 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Enterobacter sp. TBS_079 0.35 MPMX20_00927 Glutamate 5-kinase 0.19 MPMX20_00556 Ornithine carbamoyltransferase subunit F 0.89 32
Pantoea sp. MT58 0.35 IAI47_15120 glutamate 5-kinase 0.18 IAI47_16830 ornithine carbamoyltransferase 0.87 44
Erwinia tracheiphila SCR3 0.35 LU632_RS01185 proB glutamate 5-kinase 0.18 LU632_RS20900 argF ornithine carbamoyltransferase low > 74
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS25360 glutamate 5-kinase 0.17 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS25360 glutamate 5-kinase 0.17 PFLU_RS05680 ornithine carbamoyltransferase — —
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS27270 glutamate 5-kinase 0.19 QEN71_RS02785 ornithine carbamoyltransferase 0.94 15
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS17110 glutamate 5-kinase 0.19 BPHYT_RS15915 ornithine carbamoyltransferase — —
Pseudomonas simiae WCS417 0.34 PS417_23545 gamma-glutamyl kinase 0.16 PS417_22335 ornithine carbamoyltransferase low > 88
Azospirillum brasilense Sp245 0.34 AZOBR_RS04095 glutamate 5-kinase 0.22 AZOBR_RS19030 ornithine carbamoyltransferase — —
Variovorax sp. OAS795 0.34 ABID97_RS23400 glutamate 5-kinase 0.18 ABID97_RS08630 ornithine carbamoyltransferase — —
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_2197 proB gamma-glutamyl kinase 0.20 Synpcc7942_2514 argF ornithine carbamoyltransferase — —
Paraburkholderia graminis OAS925 0.34 ABIE53_003588 glutamate 5-kinase 0.20 ABIE53_003354 ornithine carbamoyltransferase — —
Pseudomonas putida KT2440 0.34 PP_0691 Glutamate 5-kinase 0.17 PP_1000 ornithine carbamoyltransferase, catabolic low > 96
Dickeya dadantii 3937 0.34 DDA3937_RS16535 glutamate 5-kinase 0.18 DDA3937_RS01940 ornithine carbamoyltransferase 0.68 49
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_06264 glutamate 5-kinase 0.20 H281DRAFT_04119 ornithine carbamoyltransferase 0.52 29
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4771 Glutamate 5-kinase (EC 2.7.2.11) 0.18 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Dickeya dianthicola 67-19 0.34 HGI48_RS16605 glutamate 5-kinase 0.18 HGI48_RS01915 ornithine carbamoyltransferase low > 71
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS01815 gamma-glutamyl kinase 0.17 HSERO_RS07185 Ornithine carbamoyltransferase (EC 2.1.3.3) (from data) — —
Dickeya dianthicola ME23 0.33 DZA65_RS17695 glutamate 5-kinase 0.18 DZA65_RS01985 ornithine carbamoyltransferase 0.83 6
Pseudomonas sp. RS175 0.33 PFR28_03769 Glutamate 5-kinase 0.17 PFR28_03363 Ornithine carbamoyltransferase 1, anabolic — —
Dechlorosoma suillum PS 0.33 Dsui_0166 glutamate 5-kinase 0.18 Dsui_3249 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_15815 gamma-glutamyl kinase 0.17 AO356_05275 ornithine carbamoyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.17 Pf6N2E2_5579 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 103
Pseudomonas sp. S08-1 0.33 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA 0.17 OH686_20405 ornithine carbamoyltransferase low > 80
Pectobacterium carotovorum WPP14 0.33 HER17_RS04700 glutamate 5-kinase 0.18 HER17_RS19500 ornithine carbamoyltransferase low > 75
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.17 PfGW456L13_1873 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_0704 glutamate 5-kinase 0.16 Psyr_3901 ornithine carbamoyltransferase — —
Azospirillum sp. SherDot2 0.33 MPMX19_01933 Glutamate 5-kinase 0.20 MPMX19_02178 Ornithine carbamoyltransferase, anabolic — —
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_0704 glutamate 5-kinase 0.16 Psyr_3901 ornithine carbamoyltransferase — —
Rhizobium sp. OAE497 0.33 ABIE40_RS18920 glutamate 5-kinase 0.23 ABIE40_RS02325 ornithine carbamoyltransferase 0.91 16
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_11575 glutamate 5-kinase 0.17 CSW01_12720 ornithine carbamoyltransferase low > 62
Sinorhizobium meliloti 1021 0.33 SMc03776 gamma-glutamyl kinase 0.20 SMc02137 ornithine carbamoyltransferase 0.84 41
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_14115 gamma-glutamyl kinase 0.17 AO353_04155 ornithine carbamoyltransferase 0.80 3
Variovorax sp. SCN45 0.32 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.19 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Pseudomonas stutzeri RCH2 0.32 Psest_3384 glutamate 5-kinase 0.17 Psest_1291 ornithine carbamoyltransferase — —
Agrobacterium fabrum C58 0.32 Atu2780 gamma-glutamyl kinase 0.23 Atu0429 ornithine carbamoyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_1377 gamma-glutamyl kinase (RefSeq) 0.18 DvMF_0046 ornithine carbamoyltransferase (RefSeq) 0.96 6
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU0930 proB glutamate 5-kinase (TIGR) 0.16 DVU1096 argF ornithine carbamoyltransferase (TIGR) 0.88 7
Rhodospirillum rubrum S1H 0.30 Rru_A1239 Glutamate 5-kinase, ProB-related (NCBI) 0.21 Rru_A3276 Ornithine carbamoyltransferase (NCBI) 0.69 26
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.18 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_1467 glutamate 5-kinase (RefSeq) 0.21 Dshi_0796 ornithine carbamoyltransferase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.30 TX73_000850 glutamate 5-kinase 0.20 TX73_024805 ornithine carbamoyltransferase — —
Bosea sp. OAE506 0.30 ABIE41_RS07585 glutamate 5-kinase 0.20 ABIE41_RS04335 ornithine carbamoyltransferase — —
Acinetobacter radioresistens SK82 0.30 MPMX26_02135 Glutamate 5-kinase 0.19 MPMX26_01287 Ornithine carbamoyltransferase 1, anabolic low > 36
Phaeobacter inhibens DSM 17395 0.29 PGA1_c15510 glutamate 5-kinase ProB 0.23 PGA1_c24220 ornithine carbamoyltransferase ArgF 0.75 32
Marinobacter adhaerens HP15 0.29 HP15_508 gamma-glutamyl kinase 0.19 HP15_3987 ornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 0.29 CCNA_00316 glutamate 5-kinase 0.18 CCNA_02325 ornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_00316 glutamate 5-kinase 0.18 CCNA_02325 ornithine carbamoyltransferase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS16125 glutamate 5-kinase 0.19 A4249_RS11920 ornithine carbamoyltransferase 0.99 19
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS22170 glutamate 5-kinase 0.26 ABZR88_RS15495 acetylornithine carbamoyltransferase — —
Bifidobacterium breve UCC2003 0.26 BBR_RS19445 glutamate 5-kinase 0.20 BBR_RS13905 ornithine carbamoyltransferase low > 34
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.28 Echvi_3849 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) 0.80 5
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS20855 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.26 CA265_RS18520 acetylornithine carbamoyltransferase 0.95 4
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_07725 glutamate 5-kinase 0.26 CA264_06240 acetylornithine carbamoyltransferase low > 74
Mycobacterium tuberculosis H37Rv 0.24 Rv2439c Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK) 0.19 Rv1656 Probable ornithine carbamoyltransferase, anabolic ArgF — —
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.17 Ga0059261_3206 ornithine carbamoyltransferase 0.89 29
Bacteroides thetaiotaomicron VPI-5482 0.24 BT3719 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.27 BT3717 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) 0.75 49
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS08650 glutamate 5-kinase 0.25 HMPREF1058_RS08640 acetylornithine carbamoyltransferase 0.73 59
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS10650 glutamate 5-kinase 0.27 HMPREF1078_RS10660 acetylornithine carbamoyltransferase 0.97 27
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS02880 glutamate 5-kinase 0.25 ABI39_RS02870 acetylornithine carbamoyltransferase 0.86 16
Bacteroides ovatus ATCC 8483 0.23 BACOVA_03537 glutamate 5-kinase 0.27 BACOVA_03533 N-acetylornithine carbamoyltransferase 0.95 12
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS03325 glutamate 5-kinase 0.27 HMPREF1181_RS03315 N-acetylornithine carbamoyltransferase 0.95 14

Not shown: 0 genomes with orthologs for Xcc-8004.2326.1 only; 3 genomes with orthologs for Xcc-8004.2316.1 only