Conservation of cofitness between Xcc-8004.1434.1 and Xcc-8004.1059.1 in Xanthomonas campestris pv. campestris strain 8004

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1434.1 FIG000859: hypothetical protein YebC 1.0 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6) 0.53 20
Lysobacter sp. OAE881 0.76 ABIE51_RS05035 YebC/PmpR family DNA-binding transcriptional regulator 0.69 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit low > 62
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_18010 hypothetical protein 0.36 AO356_16170 acetolactate synthase 3 catalytic subunit low > 104
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_5534 FIG000859: hypothetical protein YebC 0.35 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) low > 103
Pseudomonas sp. RS175 0.58 PFR28_03415 Transcriptional regulatory protein PmpR 0.35 PFR28_03699 Acetolactate synthase isozyme 3 large subunit low > 88
Dechlorosoma suillum PS 0.58 Dsui_0489 DNA-binding regulatory protein, YebC/PmpR family 0.43 Dsui_1925 acetolactate synthase, large subunit, biosynthetic type low > 51
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS17750 transcriptional regulator 0.39 HSERO_RS08650 acetolactate synthase
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS04735 hypothetical protein 0.39 RR42_RS05435 acetolactate synthase 3 catalytic subunit
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1850 FIG000859: hypothetical protein YebC 0.36 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) low > 87
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_1407 Protein of unknown function DUF28 0.37 Psyr_0846 acetolactate synthase, large subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_1407 Protein of unknown function DUF28 0.37 Psyr_0846 acetolactate synthase, large subunit low > 86
Shewanella oneidensis MR-1 0.55 SO2432 conserved hypothetical protein TIGR01033 (NCBI ptt file) 0.54 SO4347 ilvG acetolactate synthase II, large subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_1954 hypothetical protein (RefSeq) 0.54 Shewana3_0356 acetolactate synthase 2 catalytic subunit (RefSeq) low > 73
Dickeya dadantii 3937 0.55 DDA3937_RS10065 YebC/PmpR family DNA-binding transcriptional regulator 0.58 DDA3937_RS20170 acetolactate synthase 2 catalytic subunit low > 74
Dickeya dianthicola ME23 0.55 DZA65_RS10510 YebC/PmpR family DNA-binding transcriptional regulator 0.57 DZA65_RS21350 acetolactate synthase 2 catalytic subunit low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS10095 YebC/PmpR family DNA-binding transcriptional regulator 0.57 HGI48_RS20310 acetolactate synthase 2 catalytic subunit low > 71
Pectobacterium carotovorum WPP14 0.54 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator 0.57 HER17_RS01060 acetolactate synthase 2 catalytic subunit low > 75
Shewanella amazonensis SB2B 0.54 Sama_1842 hypothetical protein (RefSeq) 0.54 Sama_3281 acetolactate synthase 2 catalytic subunit (RefSeq) low > 62
Pseudomonas fluorescens SBW25 0.54 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator 0.36 PFLU_RS25650 acetolactate synthase 3 large subunit
Shewanella loihica PV-4 0.54 Shew_2078 hypothetical protein (RefSeq) 0.53 Shew_0289 acetolactate synthase 2 catalytic subunit (RefSeq)
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator 0.36 PFLU_RS25650 acetolactate synthase 3 large subunit
Erwinia tracheiphila SCR3 0.54 LU632_RS13425 YebC/PmpR family DNA-binding transcriptional regulator 0.55 LU632_RS24415 ilvG acetolactate synthase 2 catalytic subunit low > 74
Serratia liquefaciens MT49 0.54 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator 0.56 IAI46_24360 acetolactate synthase 2 catalytic subunit low > 86
Pseudomonas simiae WCS417 0.53 PS417_22460 hypothetical protein 0.35 PS417_23810 acetolactate synthase 3 catalytic subunit
Rahnella sp. WP5 0.53 EX31_RS11685 YebC/PmpR family DNA-binding transcriptional regulator 0.57 EX31_RS14990 acetolactate synthase 2 catalytic subunit low > 89
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_03595 hypothetical protein 0.36 AO353_14495 acetolactate synthase 3 catalytic subunit low > 101
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_640 FIG000859: hypothetical protein YebC 0.36 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6)
Enterobacter sp. TBS_079 0.53 MPMX20_02769 putative transcriptional regulatory protein YebC 0.56 MPMX20_04502 Acetolactate synthase isozyme 2 large subunit low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_01864 putative transcriptional regulatory protein YebC 0.56 OHPLBJKB_04285 Acetolactate synthase isozyme 2 large subunit low > 73
Escherichia coli ECOR38 0.53 HEPCGN_04665 putative transcriptional regulatory protein YebC 0.56 HEPCGN_13365 ilvG acetolactate synthase 2 catalytic subunit low > 87
Escherichia coli ECRC100 0.53 OKFHMN_26255 putative transcriptional regulatory protein YebC 0.56 OKFHMN_14655 ilvG acetolactate synthase 2 catalytic subunit low > 80
Escherichia coli ECOR27 0.53 NOLOHH_16700 putative transcriptional regulatory protein YebC 0.56 NOLOHH_06790 ilvG acetolactate synthase 2 catalytic subunit low > 75
Escherichia coli ECRC98 0.53 JDDGAC_00830 putative transcriptional regulatory protein YebC 0.56 JDDGAC_18275 ilvG acetolactate synthase 2 catalytic subunit low > 86
Ralstonia solanacearum GMI1000 0.53 RS_RS10990 YebC/PmpR family DNA-binding transcriptional regulator 0.40 RS_RS10420 acetolactate synthase 3 large subunit
Marinobacter adhaerens HP15 0.53 HP15_2043 protein YebC 0.52 HP15_1017 acetolactate synthase, large subunit, biosynthetic type low > 73
Escherichia coli ECRC101 0.53 MCAODC_19150 putative transcriptional regulatory protein YebC 0.56 MCAODC_05160 ilvG acetolactate synthase 2 catalytic subunit low > 87
Escherichia coli ECRC102 0.53 NIAGMN_01805 putative transcriptional regulatory protein YebC 0.56 NIAGMN_12410 ilvG acetolactate synthase 2 catalytic subunit
Escherichia fergusonii Becca 0.53 EFB2_02078 putative transcriptional regulatory protein YebC 0.56 EFB2_04868 Acetolactate synthase isozyme 2 large subunit low > 86
Escherichia coli ECRC99 0.53 KEDOAH_01850 putative transcriptional regulatory protein YebC 0.56 KEDOAH_13495 ilvG acetolactate synthase 2 catalytic subunit
Paraburkholderia graminis OAS925 0.53 ABIE53_001546 YebC/PmpR family DNA-binding regulatory protein 0.39 ABIE53_001574 acetolactate synthase-1/2/3 large subunit
Escherichia coli ECRC62 0.53 BNILDI_15490 putative transcriptional regulatory protein YebC 0.56 BNILDI_04735 ilvG acetolactate synthase 2 catalytic subunit low > 75
Escherichia coli Nissle 1917 0.53 ECOLIN_RS10380 YebC/PmpR family DNA-binding transcriptional regulator 0.56 ECOLIN_RS21650 acetolactate synthase 2 catalytic subunit low > 55
Escherichia coli BL21 0.53 ECD_01835 UPF0082 family protein 0.56 ECD_03646 acetolactate synthase II, valine insensitive, large subunit low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF1645 FIG000859: hypothetical protein YebC 0.57 GFF2904 Acetolactate synthase large subunit (EC 2.2.1.6) low > 78
Enterobacter asburiae PDN3 0.53 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family 0.57 EX28DRAFT_4440 acetolactate synthase, large subunit (EC 2.2.1.6) low > 76
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_04522 DNA-binding regulatory protein, YebC/PmpR family 0.40 H281DRAFT_04551 acetolactate synthase, large subunit
Escherichia coli BW25113 0.53 b1864 yebC hypothetical protein (NCBI) 0.41 b3671 ilvB acetolactate synthase large subunit (NCBI) low > 76
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS15405 YebC/PmpR family DNA-binding transcriptional regulator 0.39 ABZR87_RS14955 acetolactate synthase 3 catalytic subunit low > 80
Rhodanobacter denitrificans MT42 0.53 LRK55_RS04700 YebC/PmpR family DNA-binding transcriptional regulator 0.33 LRK55_RS09950 biosynthetic-type acetolactate synthase large subunit low > 63
Ralstonia solanacearum UW163 0.53 UW163_RS10130 YebC/PmpR family DNA-binding transcriptional regulator 0.40 UW163_RS10675 acetolactate synthase 3 large subunit
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS04920 YebC/PmpR family DNA-binding transcriptional regulator 0.33 LRK54_RS10310 biosynthetic-type acetolactate synthase large subunit low > 59
Pantoea sp. MT58 0.53 IAI47_08435 YebC/PmpR family DNA-binding transcriptional regulator 0.56 IAI47_01020 acetolactate synthase 2 catalytic subunit low > 76
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_01830 tACO1 YebC/PmpR family DNA-binding transcriptional regulator 0.32 OKGIIK_13610 ilvB biosynthetic-type acetolactate synthase large subunit low > 52
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS03540 YebC/PmpR family DNA-binding transcriptional regulator 0.40 RALBFv3_RS03050 acetolactate synthase 3 large subunit
Pseudomonas sp. S08-1 0.52 OH686_19120 Probable transcriptional regulatory protein YebC 0.37 OH686_08130 acetolactate synthase, large subunit, biosynthetic type low > 80
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS06410 transcriptional regulator 0.39 BPHYT_RS06545 acetolactate synthase 0.25 83
Ralstonia solanacearum PSI07 0.52 RPSI07_RS13685 YebC/PmpR family DNA-binding transcriptional regulator 0.40 RPSI07_RS14255 acetolactate synthase, large subunit, biosynthetic type
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF4523 FIG000859: hypothetical protein YebC 0.40 GFF2981 Acetolactate synthase large subunit (EC 2.2.1.6) low > 90
Variovorax sp. SCN45 0.52 GFF303 Probable transcriptional regulatory protein YebC 0.42 GFF903 Acetolactate synthase large subunit (EC 2.2.1.6) 0.61 92
Pseudomonas stutzeri RCH2 0.52 Psest_1494 DNA-binding regulatory protein, YebC/PmpR family 0.37 Psest_1036 acetolactate synthase, large subunit, biosynthetic type
Klebsiella michiganensis M5al 0.52 BWI76_RS18160 YebC/PmpR family DNA-binding transcriptional regulator 0.56 BWI76_RS00960 acetolactate synthase 2 catalytic subunit
Pseudomonas putida KT2440 0.52 PP_1214 putative transcriptional regulatory protein 0.36 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase low > 96
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS24395 YebC/PmpR family DNA-binding transcriptional regulator 0.39 QEN71_RS24225 acetolactate synthase 3 catalytic subunit low > 153
Variovorax sp. OAS795 0.51 ABID97_RS16740 YebC/PmpR family DNA-binding transcriptional regulator 0.41 ABID97_RS12545 biosynthetic-type acetolactate synthase large subunit low > 91
Acidovorax sp. GW101-3H11 0.51 Ac3H11_2422 FIG000859: hypothetical protein 0.36 Ac3H11_525 Acetolactate synthase large subunit (EC 2.2.1.6)
Castellaniella sp019104865 MT123 0.50 ABCV34_RS02555 YebC/PmpR family DNA-binding transcriptional regulator 0.41 ABCV34_RS12235 biosynthetic-type acetolactate synthase large subunit
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS10850 YebC/PmpR family DNA-binding transcriptional regulator 0.36 ABZR86_RS15935 biosynthetic-type acetolactate synthase large subunit
Acinetobacter radioresistens SK82 0.45 MPMX26_01851 putative transcriptional regulatory protein YebC 0.37 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit low > 36
Desulfovibrio vulgaris Miyazaki F 0.42 DvMF_3201 hypothetical protein (RefSeq) 0.42 DvMF_0153 acetolactate synthase, large subunit, biosynthetic type (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.42 DVU2259 conserved hypothetical protein TIGR01033 (TIGR) 0.42 DVU1376 ilvB-2 acetolactate synthase, large subunit, biosynthetic type (TIGR) low > 55
Rhodopseudomonas palustris CGA009 0.41 TX73_005640 YebC/PmpR family DNA-binding transcriptional regulator 0.39 TX73_010465 acetolactate synthase 3 large subunit
Sinorhizobium meliloti 1021 0.40 SMc03969 hypothetical protein 0.41 SMc01431 acetolactate synthase 3 catalytic subunit low > 103
Bosea sp. OAE506 0.39 ABIE41_RS09460 YebC/PmpR family DNA-binding transcriptional regulator 0.41 ABIE41_RS12890 acetolactate synthase 3 large subunit
Rhizobium sp. OAE497 0.39 ABIE40_RS15665 YebC/PmpR family DNA-binding transcriptional regulator 0.40 ABIE40_RS11495 acetolactate synthase 3 large subunit low > 107
Rhodospirillum rubrum S1H 0.39 Rru_A1086 hypothetical protein (RefSeq) 0.41 Rru_A0467 Acetolactate synthase, large subunit, biosynthetic type (NCBI) low > 58
Agrobacterium fabrum C58 0.39 Atu3727 hypothetical protein 0.39 Atu2036 acetolactate synthase III, large subunit low > 89
Azospirillum sp. SherDot2 0.39 MPMX19_00695 putative transcriptional regulatory protein 0.43 MPMX19_01776 Acetolactate synthase isozyme 3 large subunit
Magnetospirillum magneticum AMB-1 0.39 AMB_RS16265 YebC/PmpR family DNA-binding transcriptional regulator 0.43 AMB_RS17740 acetolactate synthase 3 large subunit
Azospirillum brasilense Sp245 0.39 AZOBR_RS09035 transcriptional regulator 0.42 AZOBR_RS06560 acetolactate synthase low > 97
Mycobacterium tuberculosis H37Rv 0.38 Rv2603c Highly conserved protein 0.41 Rv3003c Acetolactate synthase (large subunit) IlvB1 (acetohydroxy-acid synthase)
Phaeobacter inhibens DSM 17395 0.38 PGA1_c21770 DNA-binding regulatory protein, YebC/PmpR family 0.41 PGA1_c20210 acetolactate synthase isozyme 3 large subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS15840 YebC/PmpR family DNA-binding transcriptional regulator 0.57 A4249_RS10020 acetolactate synthase 2 catalytic subunit
Caulobacter crescentus NA1000 0.35 CCNA_03352 YebC/PmpR transcriptional regulator 0.41 CCNA_02185 acetolactate synthase large subunit low > 66
Dinoroseobacter shibae DFL-12 0.35 Dshi_2762 protein of unknown function DUF28 (RefSeq) 0.40 Dshi_1779 acetolactate synthase, large subunit, biosynthetic type (RefSeq)
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_03352 YebC/PmpR transcriptional regulator 0.41 CCNA_02185 acetolactate synthase large subunit low > 67
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_0824 DNA-binding regulatory protein, YebC/PmpR family 0.40 Ga0059261_0068 acetolactate synthase, large subunit (EC 2.2.1.6)
Bifidobacterium breve UCC2003 0.35 BBR_RS15645 YebC/PmpR family DNA-binding transcriptional regulator 0.36 BBR_RS12350 acetolactate synthase large subunit
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_14085 transcriptional regulator 0.51 CSW01_00155 acetolactate synthase 2 catalytic subunit low > 62
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS16620 YebC/PmpR family DNA-binding transcriptional regulator 0.42 HMPREF1181_RS08330 biosynthetic-type acetolactate synthase large subunit low > 56
Alteromonas macleodii MIT1002 0.32 MIT1002_00845 putative transcriptional regulatory protein YeeN 0.37 MIT1002_00503 Acetolactate synthase isozyme 3 large subunit low > 70
Bacteroides ovatus ATCC 8483 0.32 BACOVA_02249 DNA-binding regulatory protein, YebC/PmpR family 0.41 BACOVA_03303 acetolactate synthase, large subunit, biosynthetic type low > 94
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_01650 YebC/PmpR family DNA-binding transcriptional regulator 0.41 CA264_06930 acetolactate synthase, large subunit, biosynthetic type low > 74
Phocaeicola dorei CL03T12C01 0.32 ABI39_RS17640 YebC/PmpR family DNA-binding transcriptional regulator 0.42 ABI39_RS12720 biosynthetic-type acetolactate synthase large subunit low > 72
Phocaeicola vulgatus CL09T03C04 0.32 HMPREF1058_RS03510 YebC/PmpR family DNA-binding transcriptional regulator 0.42 HMPREF1058_RS16820 biosynthetic-type acetolactate synthase large subunit low > 67
Bacteroides thetaiotaomicron VPI-5482 0.32 BT0627 conserved hypothetical protein, with a conserved domain of unknown function (NCBI ptt file) 0.41 BT2077 acetolactate synthase large subunit (NCBI ptt file)
Synechococcus elongatus PCC 7942 0.29 Synpcc7942_1017 hypothetical protein 0.43 Synpcc7942_0139 ilvB acetolactate synthase 3 catalytic subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS22270 YebC/PmpR family DNA-binding transcriptional regulator 0.41 ABZR88_RS11580 biosynthetic-type acetolactate synthase large subunit
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS09835 YebC/PmpR family DNA-binding transcriptional regulator 0.40 HMPREF1078_RS16690 biosynthetic-type acetolactate synthase large subunit low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS15330 YebC/PmpR family DNA-binding transcriptional regulator 0.41 CA265_RS15805 acetolactate synthase, large subunit, biosynthetic type low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_1239 DNA-binding regulatory protein, YebC/PmpR family 0.42 Echvi_2056 acetolactate synthase, large subunit, biosynthetic type low > 79

Not shown: 2 genomes with orthologs for Xcc-8004.1434.1 only; 2 genomes with orthologs for Xcc-8004.1059.1 only