Conservation of cofitness between Psyr_4369 and Psyr_1983 in Pseudomonas syringae pv. syringae B728a

100 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 1.0 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.89 11
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 1.00 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.92 13
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_06495 gamma-glutamyl phosphate reductase 0.91 AO353_20620 isopropylmalate isomerase 0.66 21
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_15290 gamma-glutamyl phosphate reductase 0.91 AO356_21400 isopropylmalate isomerase low > 104
Pseudomonas sp. RS175 0.87 PFR28_03872 Gamma-glutamyl phosphate reductase 0.91 PFR28_02824 3-isopropylmalate dehydratase large subunit
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2688 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.92 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 87
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_4993 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.91 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 103
Pseudomonas putida KT2440 0.85 PP_4811 Gamma-glutamyl phosphate reductase 0.88 PP_1985 3-isopropylmalate dehydratase large subunit low > 96
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_1356 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.91 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 87
Pseudomonas fluorescens SBW25 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.91 PFLU_RS20580 3-isopropylmalate dehydratase large subunit
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.91 PFLU_RS20580 3-isopropylmalate dehydratase large subunit
Pseudomonas simiae WCS417 0.75 PS417_24745 gamma-glutamyl phosphate reductase 0.91 PS417_18600 isopropylmalate isomerase 0.62 29
Pseudomonas stutzeri RCH2 0.73 Psest_0508 gamma-glutamyl phosphate reductase 0.85 Psest_2591 3-isopropylmalate dehydratase, large subunit 0.79 17
Pseudomonas sp. S08-1 0.72 OH686_09340 Gamma-glutamyl phosphate reductase 0.86 OH686_04480 3-isopropylmalate dehydratase large subunit 0.72 35
Marinobacter adhaerens HP15 0.70 HP15_601 gamma-glutamyl phosphate reductase 0.77 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain
Acinetobacter radioresistens SK82 0.67 MPMX26_00417 Gamma-glutamyl phosphate reductase 0.74 MPMX26_00345 3-isopropylmalate dehydratase large subunit low > 36
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS01395 glutamate-5-semialdehyde dehydrogenase 0.71 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit low > 80
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS26940 glutamate-5-semialdehyde dehydrogenase 0.71 QEN71_RS17605 3-isopropylmalate dehydratase large subunit low > 153
Dechlorosoma suillum PS 0.60 Dsui_1220 gamma-glutamyl phosphate reductase 0.66 Dsui_3201 3-isopropylmalate dehydratase, large subunit
Ralstonia solanacearum PSI07 0.60 RPSI07_RS11475 glutamate-5-semialdehyde dehydrogenase 0.71 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit 0.58 17
Ralstonia solanacearum UW163 0.60 UW163_RS07800 glutamate-5-semialdehyde dehydrogenase 0.70 UW163_RS11105 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS05825 glutamate-5-semialdehyde dehydrogenase 0.70 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit low > 76
Ralstonia solanacearum GMI1000 0.59 RS_RS13715 gamma-glutamyl-phosphate reductase 0.70 RS_RS10000 3-isopropylmalate dehydratase large subunit
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS02965 gamma-glutamyl phosphate reductase 0.71 HSERO_RS16515 isopropylmalate isomerase low > 78
Castellaniella sp019104865 MT123 0.58 ABCV34_RS00845 glutamate-5-semialdehyde dehydrogenase 0.71 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_06324 glutamate-5-semialdehyde dehydrogenase 0.72 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit low > 103
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS16770 gamma-glutamyl phosphate reductase 0.71 BPHYT_RS33915 isopropylmalate isomerase
Acidovorax sp. GW101-3H11 0.57 Ac3H11_704 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.68 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 79
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS17530 gamma-glutamyl phosphate reductase 0.72 RR42_RS14400 isopropylmalate isomerase low > 128
Variovorax sp. SCN45 0.56 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.69 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF2641 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.68 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 90
Paraburkholderia graminis OAS925 0.55 ABIE53_003523 glutamate-5-semialdehyde dehydrogenase 0.71 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit low > 113
Variovorax sp. OAS795 0.54 ABID97_RS04600 glutamate-5-semialdehyde dehydrogenase 0.69 ABID97_RS08465 3-isopropylmalate dehydratase large subunit
Magnetospirillum magneticum AMB-1 0.50 AMB_RS20640 glutamate-5-semialdehyde dehydrogenase 0.63 AMB_RS20560 3-isopropylmalate dehydratase large subunit
Rhodospirillum rubrum S1H 0.49 Rru_A1238 Gamma-glutamyl phosphate reductase GPR (NCBI) 0.67 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI)
Azospirillum sp. SherDot2 0.48 MPMX19_01943 Gamma-glutamyl phosphate reductase 0.67 MPMX19_01998 3-isopropylmalate dehydratase large subunit
Agrobacterium fabrum C58 0.48 Atu2779 gamma-glutamyl phosphate reductase 0.62 Atu2709 3-isopropylmalate dehydratase, large subunit
Sinorhizobium meliloti 1021 0.48 SMc03777 gamma-glutamyl phosphate reductase 0.64 SMc03823 isopropylmalate isomerase large subunit 0.92 13
Azospirillum brasilense Sp245 0.46 AZOBR_RS04075 gamma-glutamyl phosphate reductase 0.66 AZOBR_RS03545 isopropylmalate isomerase
Rhizobium sp. OAE497 0.46 ABIE40_RS18925 glutamate-5-semialdehyde dehydrogenase 0.63 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.94 3
Dinoroseobacter shibae DFL-12 0.46 Dshi_1469 gamma-glutamyl phosphate reductase (RefSeq) 0.60 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_2506 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.58 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit 0.97 10
Rhodopseudomonas palustris CGA009 0.45 TX73_000855 glutamate-5-semialdehyde dehydrogenase 0.63 TX73_001245 3-isopropylmalate dehydratase large subunit
Caulobacter crescentus NA1000 0.45 CCNA_03543 gamma-glutamyl phosphate reductase 0.62 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.89 33
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_03543 gamma-glutamyl phosphate reductase 0.62 CCNA_00196 3-isopropylmalate dehydratase large subunit low > 67
Rhodanobacter denitrificans MT42 0.44 LRK55_RS02125 glutamate-5-semialdehyde dehydrogenase 0.59 LRK55_RS07105 3-isopropylmalate dehydratase large subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS02370 glutamate-5-semialdehyde dehydrogenase 0.59 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Alteromonas macleodii MIT1002 0.44 MIT1002_01885 Gamma-glutamyl phosphate reductase 0.57 MIT1002_00947 3-isopropylmalate dehydratase large subunit 0.98 11
Lysobacter sp. OAE881 0.44 ABIE51_RS13365 glutamate-5-semialdehyde dehydrogenase 0.47 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.85 58
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS08680 glutamate-5-semialdehyde dehydrogenase 0.48 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.86 36
Klebsiella michiganensis M5al 0.44 BWI76_RS05835 gamma-glutamyl-phosphate reductase 0.61 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.84 13
Escherichia coli Nissle 1917 0.44 ECOLIN_RS01830 glutamate-5-semialdehyde dehydrogenase 0.62 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit 0.93 10
Phaeobacter inhibens DSM 17395 0.44 PGA1_c15520 gamma-glutamyl phosphate reductase ProA 0.60 PGA1_c29780 3-isopropylmalate dehydratase large subunit 0.80 14
Escherichia coli ECRC102 0.43 NIAGMN_07530 proA glutamate-5-semialdehyde dehydrogenase 0.61 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC62 0.43 BNILDI_00240 proA glutamate-5-semialdehyde dehydrogenase 0.62 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1 0.97 18
Escherichia coli BL21 0.43 ECD_00240 gamma-glutamylphosphate reductase 0.62 ECD_00074 3-isopropylmalate dehydratase large subunit 0.93 7
Escherichia coli ECRC100 0.43 OKFHMN_09670 proA glutamate-5-semialdehyde dehydrogenase 0.61 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1 0.95 39
Escherichia coli ECRC99 0.43 KEDOAH_18485 proA glutamate-5-semialdehyde dehydrogenase 0.61 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECOR27 0.43 NOLOHH_02045 proA glutamate-5-semialdehyde dehydrogenase 0.62 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 0.98 8
Escherichia coli ECRC101 0.43 MCAODC_00190 proA glutamate-5-semialdehyde dehydrogenase 0.61 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1 0.95 8
Escherichia coli ECRC98 0.43 JDDGAC_13295 proA glutamate-5-semialdehyde dehydrogenase 0.61 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1 0.86 37
Escherichia coli ECOR38 0.43 HEPCGN_07775 proA glutamate-5-semialdehyde dehydrogenase 0.62 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 0.93 24
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03397 Gamma-glutamyl phosphate reductase 0.61 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia fergusonii Becca 0.43 EFB2_03777 Gamma-glutamyl phosphate reductase 0.62 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Escherichia coli BW25113 0.43 b0243 proA gamma-glutamyl phosphate reductase (NCBI) 0.62 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.94 9
Enterobacter sp. TBS_079 0.43 MPMX20_00928 Gamma-glutamyl phosphate reductase 0.61 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.90 29
Enterobacter asburiae PDN3 0.43 EX28DRAFT_2650 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.61 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.78 35
Shewanella sp. ANA-3 0.43 Shewana3_4057 glutamate-5-semialdehyde dehydrogenase (RefSeq) 0.59 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF4115 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.61 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 78
Dickeya dadantii 3937 0.43 DDA3937_RS16530 glutamate-5-semialdehyde dehydrogenase 0.61 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit low > 74
Shewanella loihica PV-4 0.43 Shew_3015 gamma-glutamyl phosphate reductase (RefSeq) 0.58 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) low > 60
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU1953 proA gamma-glutamyl phosphate reductase (TIGR) 0.20 DVU2982 leuC 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) (from data) 0.87 11
Rahnella sp. WP5 0.43 EX31_RS20975 glutamate-5-semialdehyde dehydrogenase 0.62 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.98 8
Dickeya dianthicola ME23 0.42 DZA65_RS17690 glutamate-5-semialdehyde dehydrogenase 0.61 DZA65_RS19210 3-isopropylmalate dehydratase large subunit low > 75
Serratia liquefaciens MT49 0.42 IAI46_04435 glutamate-5-semialdehyde dehydrogenase 0.59 IAI46_03345 3-isopropylmalate dehydratase large subunit 0.75 20
Pantoea sp. MT58 0.41 IAI47_15115 glutamate-5-semialdehyde dehydrogenase 0.60 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.92 27
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_1470 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.77 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit low > 40
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_09415 proA glutamate-5-semialdehyde dehydrogenase 0.48 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit low > 52
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2327.1 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.84 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.68 68
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS16120 glutamate-5-semialdehyde dehydrogenase 0.47 A4249_RS10005 3-isopropylmalate dehydratase large subunit 0.99 4
Erwinia tracheiphila SCR3 0.40 LU632_RS01190 proA glutamate-5-semialdehyde dehydrogenase 0.56 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit low > 74
Bosea sp. OAE506 0.40 ABIE41_RS07580 glutamate-5-semialdehyde dehydrogenase 0.63 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Desulfovibrio vulgaris Miyazaki F 0.40 DvMF_0612 proA gamma-glutamyl phosphate reductase (RefSeq) 0.20 DvMF_1792 3-isopropylmalate dehydratase large subunit (RefSeq) 0.95 12
Bifidobacterium breve UCC2003 0.40 BBR_RS14075 glutamate-5-semialdehyde dehydrogenase 0.55 BBR_RS19630 3-isopropylmalate dehydratase large subunit low > 34
Mycobacterium tuberculosis H37Rv 0.40 Rv2427c Probable gamma-glutamyl phosphate reductase protein ProA (GPR) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase) 0.56 Rv2988c Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI)
Dickeya dianthicola 67-19 0.40 HGI48_RS16600 glutamate-5-semialdehyde dehydrogenase 0.61 HGI48_RS18065 3-isopropylmalate dehydratase large subunit low > 71
Pectobacterium carotovorum WPP14 0.40 HER17_RS04705 glutamate-5-semialdehyde dehydrogenase 0.62 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.95 14
Shewanella oneidensis MR-1 0.39 SO1122 proA gamma-glutamyl phosphate reductase (NCBI ptt file) 0.59 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.98 12
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_11570 glutamate-5-semialdehyde dehydrogenase 0.59 CSW01_12605 3-isopropylmalate dehydratase large subunit low > 62
Shewanella amazonensis SB2B 0.37 Sama_2515 proA gamma-glutamyl phosphate reductase (RefSeq) 0.59 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.94 30
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_2265 proA glutamate-5-semialdehyde dehydrogenase 0.46 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS03320 glutamate-5-semialdehyde dehydrogenase 0.51 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit 0.92 29
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS10655 glutamate-5-semialdehyde dehydrogenase 0.51 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit 0.93 42
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_07720 gamma-glutamyl-phosphate reductase 0.53 CA264_09435 3-isopropylmalate dehydratase large subunit low > 74
Bacteroides thetaiotaomicron VPI-5482 0.34 BT3718 gamma-glutamyl phosphate reductase (NCBI ptt file) 0.51 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file) 0.87 30
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS20850 glutamate-5-semialdehyde dehydrogenase 0.52 CA265_RS15830 3-isopropylmalate dehydratase large subunit 0.92 27
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02875 glutamate-5-semialdehyde dehydrogenase 0.51 ABI39_RS10200 3-isopropylmalate dehydratase large subunit 0.85 21
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS22165 glutamate-5-semialdehyde dehydrogenase 0.53 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS08645 glutamate-5-semialdehyde dehydrogenase 0.51 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit 0.86 30
Bacteroides ovatus ATCC 8483 0.32 BACOVA_03534 glutamate-5-semialdehyde dehydrogenase 0.50 BACOVA_04603 3-isopropylmalate dehydratase, large subunit 0.97 5
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_2633 gamma-glutamylphosphate reductase (EC 1.2.1.41) (from data) 0.49 Echvi_2059 3-isopropylmalate dehydratase, large subunit 0.66 54

Not shown: 0 genomes with orthologs for Psyr_4369 only; 2 genomes with orthologs for Psyr_1983 only