Conservation of cofitness between Psyr_1748 and Psyr_1668 in Pseudomonas syringae pv. syringae B728a

108 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1748 ATP-dependent Clp protease ATP-binding subunit ClpX 1.0 Psyr_1668 amidophosphoribosyltransferase 0.66 3
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1748 ATP-dependent Clp protease ATP-binding subunit ClpX 1.00 Psyr_1668 amidophosphoribosyltransferase 0.61 33
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2553 ATP-dependent Clp protease ATP-binding subunit ClpX 0.95 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas sp. RS175 0.98 PFR28_01229 ATP-dependent Clp protease ATP-binding subunit ClpX 0.95 PFR28_02811 Amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_20180 ATP-dependent Clp protease ATP-binding subunit ClpX 0.95 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_01745 ATP-dependent Clp protease ATP-binding subunit ClpX 0.95 AO356_21465 amidophosphoribosyltransferase 0.47 58
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_2217 ATP-dependent Clp protease ATP-binding subunit ClpX 0.95 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas sp. DMC3 0.98 GFF1444 ATP-dependent Clp protease ATP-binding subunit ClpX 0.95 GFF798 Amidophosphoribosyltransferase low > 89
Pseudomonas fluorescens SBW25 0.97 PFLU_RS19165 ATP-dependent Clp protease ATP-binding subunit ClpX 0.95 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas lactucae CFBP13502 0.97 GEMAOFIL_03742 ATP-dependent Clp protease ATP-binding subunit ClpX 0.95 GEMAOFIL_03935 Amidophosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.97 PS417_17230 Clp protease ATP-binding protein 0.95 PS417_18535 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS19165 ATP-dependent Clp protease ATP-binding subunit ClpX 0.95 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas sp. SVBP6 0.97 COO64_RS19200 clpX ATP-dependent Clp protease ATP-binding subunit ClpX 0.94 COO64_RS05600 purF amidophosphoribosyltransferase low > 93
Pseudomonas putida KT2440 0.97 PP_2301 ATP-dependent Clp protease ATP-binding subunit ClpX 0.91 PP_2000 amidophosphoribosyl transferase — —
Pseudomonas sp. BP01 0.96 JOY50_RS25910 clpX ATP-dependent Clp protease ATP-binding subunit ClpX 0.91 JOY50_RS16565 purF amidophosphoribosyltransferase — —
Pseudomonas sp. S08-1 0.96 OH686_03640 ATP-dependent Clp protease, ATP-binding subunit ClpX 0.92 OH686_04420 amidophosphoribosyltransferase — —
Pseudomonas segetis P6 0.96 MPMX49_02262 ATP-dependent Clp protease ATP-binding subunit ClpX 0.93 MPMX49_03061 Amidophosphoribosyltransferase — —
Pseudomonas stutzeri RCH2 0.94 Psest_2286 endopeptidase Clp ATP-binding regulatory subunit (clpX) 0.92 Psest_2579 amidophosphoribosyltransferase — —
Pseudomonas aeruginosa PA14 0.94 IKLFDK_08755 endopeptidase La 0.91 IKLFDK_15815 amidophosphoribosyltransferase low > 100
Dyella japonica UNC79MFTsu3.2 0.79 ABZR86_RS07325 ATP-dependent Clp protease ATP-binding subunit ClpX 0.65 ABZR86_RS06775 amidophosphoribosyltransferase — —
Marinobacter adhaerens HP15 0.78 HP15_2184 ATP-dependent Clp protease ATP-binding subunit ClpX 0.75 HP15_1821 amidophosphoribosyltransferase — —
Rhodanobacter sp. FW510-T8 0.78 OKGIIK_08035 clpX ATP-dependent Clp protease ATP-binding subunit ClpX 0.65 OKGIIK_05570 purF amidophosphoribosyltransferase — —
Rhodanobacter sp000427505 FW510-R12 0.78 LRK53_RS12140 ATP-dependent Clp protease ATP-binding subunit ClpX 0.64 LRK53_RS08695 amidophosphoribosyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.78 LRK54_RS16730 ATP-dependent Clp protease ATP-binding subunit ClpX 0.64 LRK54_RS01340 amidophosphoribosyltransferase low > 59
Rhodanobacter denitrificans MT42 0.78 LRK55_RS16455 ATP-dependent Clp protease ATP-binding subunit ClpX 0.64 LRK55_RS01105 amidophosphoribosyltransferase low > 63
Lysobacter sp. OAE881 0.78 ABIE51_RS14150 ATP-dependent Clp protease ATP-binding subunit ClpX 0.62 ABIE51_RS06180 amidophosphoribosyltransferase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.78 Xcc-8004.4047.1 ATP-dependent Clp protease ATP-binding subunit ClpX 0.61 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Dechlorosoma suillum PS 0.77 Dsui_2197 endopeptidase Clp ATP-binding regulatory subunit ClpX 0.59 Dsui_3186 amidophosphoribosyltransferase — —
Shewanella loihica PV-4 0.77 Shew_2507 clpX ATP-dependent protease ATP-binding subunit (RefSeq) 0.62 Shew_2302 amidophosphoribosyltransferase (RefSeq) — —
Shewanella amazonensis SB2B 0.77 Sama_1225 clpX ATP-dependent protease ATP-binding subunit ClpX (RefSeq) 0.62 Sama_2146 amidophosphoribosyltransferase (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_09610 ATP-dependent Clp protease ATP-binding subunit ClpX 0.62 CSW01_05115 amidophosphoribosyltransferase — —
Shewanella sp. ANA-3 0.76 Shewana3_2660 clpX ATP-dependent protease ATP-binding subunit ClpX (RefSeq) 0.63 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_1037 endopeptidase Clp ATP-binding regulatory subunit (clpX) 0.70 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Shewanella oneidensis MR-1 0.76 SO1795 clpX ATP-dependent Clp protease, ATP-binding subunit ClpX (NCBI ptt file) 0.63 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.76 MIT1002_02759 ATP-dependent Clp protease ATP-binding subunit ClpX 0.64 MIT1002_02524 Amidophosphoribosyltransferase 0.66 23
Escherichia coli ECRC101 0.75 MCAODC_27555 clpX ATP-dependent protease ATP-binding subunit ClpX 0.62 MCAODC_13755 purF amidophosphoribosyltransferase low > 88
Escherichia coli BL21 0.75 ECD_00389 ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease 0.62 ECD_02237 amidophosphoribosyltransferase low > 61
Escherichia coli ECRC99 0.75 KEDOAH_19635 clpX ATP-dependent protease ATP-binding subunit ClpX 0.62 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC98 0.75 JDDGAC_11985 clpX ATP-dependent protease ATP-binding subunit ClpX 0.62 JDDGAC_26675 purF amidophosphoribosyltransferase low > 87
Escherichia coli Nissle 1917 0.75 ECOLIN_RS02630 ATP-dependent protease ATP-binding subunit ClpX 0.62 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Escherichia coli ECRC102 0.75 NIAGMN_06385 clpX ATP-dependent protease ATP-binding subunit ClpX 0.62 NIAGMN_20485 purF amidophosphoribosyltransferase low > 80
Escherichia coli BW25113 0.75 b0438 clpX ATP-dependent protease ATP-binding subunit (NCBI) 0.62 b2312 purF amidophosphoribosyltransferase (NCBI) 0.43 20
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_03235 ATP-dependent Clp protease ATP-binding subunit ClpX 0.62 OHPLBJKB_01393 Amidophosphoribosyltransferase low > 74
Escherichia coli ECRC100 0.75 OKFHMN_08330 clpX ATP-dependent protease ATP-binding subunit ClpX 0.62 OKFHMN_22715 purF amidophosphoribosyltransferase — —
Escherichia fergusonii Becca 0.75 EFB2_03619 ATP-dependent Clp protease ATP-binding subunit ClpX 0.62 EFB2_01546 Amidophosphoribosyltransferase low > 86
Escherichia coli ECOR38 0.75 HEPCGN_06945 clpX ATP-dependent protease ATP-binding subunit ClpX 0.62 HEPCGN_21910 purF amidophosphoribosyltransferase low > 88
Escherichia coli ECOR27 0.75 NOLOHH_01265 clpX ATP-dependent protease ATP-binding subunit ClpX 0.62 NOLOHH_14335 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC62 0.75 BNILDI_22680 clpX ATP-dependent protease ATP-binding subunit ClpX 0.62 BNILDI_13255 purF amidophosphoribosyltransferase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF4354 ATP-dependent Clp protease ATP-binding subunit ClpX 0.62 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Methylophilus sp. DMC18 0.75 GFF1304 ATP-dependent Clp protease ATP-binding subunit ClpX 0.66 GFF661 Amidophosphoribosyltransferase — —
Enterobacter asburiae PDN3 0.75 EX28DRAFT_2533 endopeptidase Clp ATP-binding regulatory subunit (clpX) 0.62 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pantoea sp. MT58 0.75 IAI47_14650 ATP-dependent protease ATP-binding subunit ClpX 0.63 IAI47_06275 amidophosphoribosyltransferase — —
Klebsiella pneumoniae MKP103 0.75 KDGMDA_14610 ATP-dependent protease ATP-binding subunit ClpX 0.62 KDGMDA_27185 amidophosphoribosyltransferase low > 95
Pantoea agglomerans CFBP13505 P0401 0.75 PagCFBP13505_RS10545 ATP-dependent protease ATP-binding subunit ClpX 0.62 PagCFBP13505_RS00230 amidophosphoribosyltransferase — —
Erwinia amylovora T8 0.75 OLJFJH_17975 ATP-dependent protease ATP-binding subunit ClpX 0.63 OLJFJH_11280 amidophosphoribosyltransferase — —
Klebsiella michiganensis M5al 0.75 BWI76_RS06530 ATP-dependent Clp protease ATP-binding subunit ClpX 0.62 BWI76_RS20350 amidophosphoribosyltransferase 0.34 32
Erwinia tracheiphila HP pepo 2.2 0.75 IJEDHG_16445 clpX ATP-dependent protease ATP-binding subunit ClpX 0.63 IJEDHG_17915 purF amidophosphoribosyltransferase — —
Enterobacter sp. TBS_079 0.75 MPMX20_01029 ATP-dependent Clp protease ATP-binding subunit ClpX 0.62 MPMX20_03247 Amidophosphoribosyltransferase low > 85
Erwinia tracheiphila SCR3 0.75 LU632_RS18340 clpX ATP-dependent protease ATP-binding subunit ClpX 0.63 LU632_RS07865 purF amidophosphoribosyltransferase — —
Serratia liquefaciens MT49 0.74 IAI46_05015 ATP-dependent protease ATP-binding subunit ClpX 0.63 IAI46_17810 amidophosphoribosyltransferase low > 86
Rahnella sp. WP5 0.74 EX31_RS22250 ATP-dependent protease ATP-binding subunit ClpX 0.62 EX31_RS19570 amidophosphoribosyltransferase low > 89
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS21980 ATP-dependent Clp protease ATP-binding subunit ClpX 0.58 QEN71_RS17680 amidophosphoribosyltransferase low > 153
Dickeya dianthicola 67-19 0.74 HGI48_RS05690 ATP-dependent protease ATP-binding subunit ClpX 0.63 HGI48_RS14405 amidophosphoribosyltransferase low > 71
Dickeya dadantii 3937 0.74 DDA3937_RS05645 ATP-dependent protease ATP-binding subunit ClpX 0.63 DDA3937_RS14435 amidophosphoribosyltransferase low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS06015 ATP-dependent protease ATP-binding subunit ClpX 0.63 DZA65_RS15335 amidophosphoribosyltransferase — —
Pectobacterium carotovorum WPP14 0.74 HER17_RS15845 ATP-dependent protease ATP-binding subunit ClpX 0.63 HER17_RS07020 amidophosphoribosyltransferase — —
Paraburkholderia graminis OAS925 0.74 ABIE53_002116 ATP-dependent Clp protease ATP-binding subunit ClpX 0.60 ABIE53_004816 amidophosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_00897 ATP-dependent Clp protease ATP-binding subunit ClpX 0.60 H281DRAFT_06060 amidophosphoribosyltransferase — —
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS09455 ATP-dependent Clp protease ATP-binding subunit ClpX 0.60 BPHYT_RS33840 amidophosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.72 RS_RS08650 ATP-dependent Clp protease ATP-binding subunit ClpX 0.59 RS_RS09930 amidophosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.72 RPSI07_RS16130 ATP-dependent Clp protease ATP-binding subunit ClpX 0.59 RPSI07_RS14765 amidophosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.72 UW163_RS14655 ATP-dependent Clp protease ATP-binding subunit ClpX 0.60 UW163_RS11175 amidophosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS01345 ATP-dependent Clp protease ATP-binding subunit ClpX 0.60 RALBFv3_RS02550 amidophosphoribosyltransferase — —
Cupriavidus basilensis FW507-4G11 0.72 RR42_RS09025 Clp protease ATP-binding protein 0.59 RR42_RS14325 amidophosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS12790 ATP-dependent Clp protease ATP-binding subunit ClpX 0.61 ABZR87_RS14465 amidophosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS12910 ATP-dependent protease 0.60 HSERO_RS16445 amidophosphoribosyltransferase — —
Variovorax sp. OAS795 0.71 ABID97_RS17595 ATP-dependent Clp protease ATP-binding subunit ClpX 0.55 ABID97_RS21635 amidophosphoribosyltransferase — —
Variovorax sp. SCN45 0.71 GFF488 ATP-dependent Clp protease ATP-binding subunit ClpX 0.55 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 127
Acidovorax sp. GW101-3H11 0.70 Ac3H11_936 ATP-dependent Clp protease ATP-binding subunit ClpX 0.56 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Sinorhizobium meliloti 1021 0.70 SMc01904 ATP-dependent protease ATP-binding subunit ClpX 0.26 SMc00554 amidophosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.70 GFF4043 ATP-dependent Clp protease ATP-binding subunit ClpX 0.57 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Agrobacterium fabrum C58 0.70 Atu1259 ATP-dependent Clp protease, ATP-binding subunit 0.27 Atu1075 amidophosphoribosyltransferase — —
Bosea sp. OAE506 0.70 ABIE41_RS18055 ATP-dependent Clp protease ATP-binding subunit ClpX 0.27 ABIE41_RS17810 amidophosphoribosyltransferase — —
Rhodopseudomonas palustris CGA009 0.69 TX73_015350 ATP-dependent Clp protease ATP-binding subunit ClpX 0.28 TX73_015990 amidophosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.69 Ga0059261_0096 endopeptidase Clp ATP-binding regulatory subunit (clpX) 0.25 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Acinetobacter baumannii LAC-4 0.69 RR41_RS16560 ATP-dependent Clp protease ATP-binding subunit ClpX 0.72 RR41_RS06350 amidophosphoribosyltransferase — —
Rhizobium sp. OAE497 0.69 ABIE40_RS07095 ATP-dependent Clp protease ATP-binding subunit ClpX 0.27 ABIE40_RS06270 amidophosphoribosyltransferase — —
Phaeobacter inhibens DSM 17395 0.69 PGA1_c12530 ATP-dependent Clp protease ATP-binding subunit ClpX 0.27 PGA1_c10810 amidophosphoribosyltransferase PurF low > 62
Acinetobacter radioresistens SK82 0.69 MPMX26_00409 ATP-dependent Clp protease ATP-binding subunit ClpX 0.71 MPMX26_01122 Amidophosphoribosyltransferase low > 36
Brevundimonas sp. GW460-12-10-14-LB2 0.69 A4249_RS06475 ATP-dependent Clp protease ATP-binding subunit ClpX 0.29 A4249_RS03735 amidophosphoribosyltransferase — —
Xanthobacter sp. DMC5 0.69 GFF1157 ATP-dependent Clp protease ATP-binding subunit ClpX 0.26 GFF1872 Amidophosphoribosyltransferase — —
Sphingobium sp. HT1-2 0.69 GFF4055 ATP-dependent Clp protease ATP-binding subunit ClpX 0.27 GFF79 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 95
Magnetospirillum magneticum AMB-1 0.68 AMB_RS14040 ATP-dependent Clp protease ATP-binding subunit ClpX 0.25 AMB_RS10545 amidophosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.68 ABCV34_RS05130 ATP-dependent Clp protease ATP-binding subunit ClpX 0.58 ABCV34_RS04130 amidophosphoribosyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.68 CCNA_02039 ATP-dependent endopeptidase clp, ATP-binding subunit ClpX 0.29 CCNA_01730 amidophosphoribosyltransferase — —
Caulobacter crescentus NA1000 0.68 CCNA_02039 ATP-dependent endopeptidase clp, ATP-binding subunit ClpX 0.29 CCNA_01730 amidophosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.68 MPMX19_01547 ATP-dependent Clp protease ATP-binding subunit ClpX 0.28 MPMX19_00906 Amidophosphoribosyltransferase — —
Rhodospirillum rubrum S1H 0.68 Rru_A1551 ClpX, ATPase regulatory subunit (NCBI) 0.28 Rru_A0404 Amidophosphoribosyl transferase (NCBI) — —
Azospirillum brasilense Sp245 0.68 AZOBR_RS07140 ATP-dependent protease 0.28 AZOBR_RS08310 amidophosphoribosyltransferase — —
Dinoroseobacter shibae DFL-12 0.66 Dshi_1387 ATP-dependent Clp protease, ATP-binding subunit ClpX (RefSeq) 0.27 Dshi_2132 amidophosphoribosyltransferase (RefSeq) low > 64
Mycobacterium tuberculosis H37Rv 0.61 Rv2457c Probable ATP-dependent CLP protease ATP-binding subunit ClpX 0.28 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase) — —
Desulfovibrio vulgaris Hildenborough JW710 0.60 DVU1336 clpX ATP-dependent Clp protease, ATP-binding subunit ClpX (TIGR) 0.28 DVU0161 purF amidophosphoribosyltransferase (TIGR) — —
Synechococcus elongatus PCC 7942 0.59 Synpcc7942_2526 clpX ATP-dependent protease ATP-binding subunit 0.31 Synpcc7942_0004 purF amidophosphoribosyltransferase — —
Synechocystis sp000284455 PCC 6803 0.59 SGL_RS16905 ATP-dependent protease ATP-binding subunit ClpX 0.29 SGL_RS13120 amidophosphoribosyltransferase — —
Fusobacterium nucleatum SB010 0.57 HUW76_01060 ATP-dependent Clp protease ATP-binding subunit ClpX 0.24 HUW76_05170 amidophosphoribosyltransferase low > 35
Bifidobacterium breve UCC2003 0.53 BBR_RS14520 ATP-dependent Clp protease ATP-binding subunit ClpX 0.30 BBR_RS13380 amidophosphoribosyltransferase low > 34
Phocaeicola vulgatus CL09T03C04 0.51 HMPREF1058_RS03080 ATP-dependent Clp protease ATP-binding subunit ClpX 0.12 HMPREF1058_RS04675 amidophosphoribosyltransferase low > 67
Phocaeicola dorei CL03T12C01 0.51 ABI39_RS02325 ATP-dependent Clp protease ATP-binding subunit ClpX 0.12 ABI39_RS18960 amidophosphoribosyltransferase — —
Parabacteroides merdae CL09T00C40 0.50 HMPREF1078_RS17045 ATP-dependent Clp protease ATP-binding subunit ClpX 0.12 HMPREF1078_RS10430 amidophosphoribosyltransferase low > 61

Not shown: 9 genomes with orthologs for Psyr_1748 only; 3 genomes with orthologs for Psyr_1668 only