Conservation of cofitness between PP_4724 and PP_0691 in Pseudomonas putida KT2440

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4724 Carbamoyl-phosphate synthase small chain 1.0 PP_0691 Glutamate 5-kinase 0.82 3
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_05635 carbamoyl phosphate synthase small subunit 0.87 AO353_14115 gamma-glutamyl kinase
Pseudomonas simiae WCS417 0.93 PS417_24045 carbamoyl phosphate synthase small subunit 0.91 PS417_23545 gamma-glutamyl kinase
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.91 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_07485 carbamoyl phosphate synthase small subunit 0.88 AO356_15815 gamma-glutamyl kinase
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.88 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA
Pseudomonas sp. RS175 0.92 PFR28_00076 Carbamoyl-phosphate synthase small chain 0.87 PFR28_03769 Glutamate 5-kinase
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.87 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA
Pseudomonas fluorescens SBW25 0.92 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.91 PFLU_RS25360 glutamate 5-kinase
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.91 PFLU_RS25360 glutamate 5-kinase
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.86 Psyr_0704 glutamate 5-kinase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.86 Psyr_0704 glutamate 5-kinase
Pseudomonas sp. S08-1 0.88 OH686_17075 Carbamoyl-phosphate synthase small chain 0.87 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA
Pseudomonas stutzeri RCH2 0.87 Psest_0967 carbamoyl-phosphate synthase, small subunit 0.79 Psest_3384 glutamate 5-kinase
Vibrio cholerae E7946 ATCC 55056 0.75 CSW01_12105 carbamoyl-phosphate synthase small subunit 0.37 CSW01_11575 glutamate 5-kinase low > 62
Marinobacter adhaerens HP15 0.75 HP15_3078 carbamoyl-phosphate synthase small chain 0.59 HP15_508 gamma-glutamyl kinase
Shewanella amazonensis SB2B 0.74 Sama_2504 carbamoyl phosphate synthase small subunit (RefSeq) 0.42 Sama_2516 gamma-glutamyl kinase (RefSeq) 0.75 51
Rahnella sp. WP5 0.72 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.39 EX31_RS20980 glutamate 5-kinase 0.94 32
Shewanella oneidensis MR-1 0.72 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) 0.39 SO1121 proB glutamate 5-kinase (NCBI ptt file) 0.89 34
Pectobacterium carotovorum WPP14 0.72 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.36 HER17_RS04700 glutamate 5-kinase 0.91 53
Klebsiella michiganensis M5al 0.72 BWI76_RS04465 carbamoyl-phosphate synthase small subunit 0.40 BWI76_RS05840 glutamate 5-kinase 0.52 38
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit 0.40 EX28DRAFT_2651 glutamate 5-kinase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.39 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA low > 78
Escherichia coli BW25113 0.71 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) 0.40 b0242 proB gamma-glutamyl kinase (NCBI) 0.84 49
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain 0.40 OHPLBJKB_03398 Glutamate 5-kinase low > 73
Escherichia fergusonii Becca 0.71 EFB2_04013 Carbamoyl-phosphate synthase small chain 0.40 EFB2_03778 Glutamate 5-kinase low > 86
Escherichia coli Nissle 1917 0.71 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.40 ECOLIN_RS01825 glutamate 5-kinase low > 52
Escherichia coli BL21 0.71 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 0.40 ECD_00239 gamma-glutamate kinase low > 60
Dickeya dadantii 3937 0.71 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.36 DDA3937_RS16535 glutamate 5-kinase 0.75 48
Escherichia coli ECRC99 0.71 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit 0.40 KEDOAH_18480 proB Glutamate 5-kinase
Enterobacter sp. TBS_079 0.71 MPMX20_00739 Carbamoyl-phosphate synthase small chain 0.39 MPMX20_00927 Glutamate 5-kinase 0.87 16
Escherichia coli ECRC102 0.71 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit 0.40 NIAGMN_07535 proB Glutamate 5-kinase
Escherichia coli ECOR27 0.71 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit 0.40 NOLOHH_02050 proB Glutamate 5-kinase low > 57
Escherichia coli ECRC101 0.71 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit 0.40 OKFHMN_09675 proB Glutamate 5-kinase
Dickeya dianthicola ME23 0.71 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.36 DZA65_RS17695 glutamate 5-kinase 0.75 23
Escherichia coli ECRC98 0.71 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit 0.40 JDDGAC_13300 proB Glutamate 5-kinase
Escherichia coli ECRC62 0.71 BNILDI_08325 carA carbamoyl phosphate synthase small subunit 0.40 BNILDI_00245 proB Glutamate 5-kinase
Alteromonas macleodii MIT1002 0.71 MIT1002_01466 Carbamoyl-phosphate synthase small chain 0.32 MIT1002_04056 Glutamate 5-kinase low > 70
Escherichia coli ECRC101 0.71 MCAODC_01460 carA carbamoyl phosphate synthase small subunit 0.40 MCAODC_00195 proB Glutamate 5-kinase
Shewanella loihica PV-4 0.71 Shew_2839 carbamoyl phosphate synthase small subunit (RefSeq) 0.41 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.89 28
Dickeya dianthicola 67-19 0.71 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.35 HGI48_RS16605 glutamate 5-kinase low > 71
Escherichia coli ECOR38 0.71 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit 0.40 HEPCGN_07780 proB Glutamate 5-kinase low > 85
Shewanella sp. ANA-3 0.70 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) 0.38 Shewana3_0954 gamma-glutamyl kinase (RefSeq) 0.91 34
Lysobacter sp. OAE881 0.70 ABIE51_RS11625 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.32 ABIE51_RS13370 glutamate 5-kinase low > 62
Serratia liquefaciens MT49 0.70 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.38 IAI46_04430 glutamate 5-kinase 0.57 82
Acinetobacter radioresistens SK82 0.70 MPMX26_00767 Carbamoyl-phosphate synthase small chain 0.51 MPMX26_02135 Glutamate 5-kinase low > 36
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.2914.1 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.33 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA
Pantoea sp. MT58 0.69 IAI47_16120 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.39 IAI47_15120 glutamate 5-kinase 0.92 4
Dechlorosoma suillum PS 0.69 Dsui_3065 carbamoyl-phosphate synthase, small subunit 0.61 Dsui_0166 glutamate 5-kinase
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS13520 carbamoyl phosphate synthase small subunit 0.58 RR42_RS17940 gamma-glutamyl kinase
Ralstonia solanacearum PSI07 0.69 RPSI07_RS15245 carbamoyl-phosphate synthase small subunit 0.57 RPSI07_RS11095 glutamate 5-kinase
Ralstonia solanacearum UW163 0.68 UW163_RS15510 carbamoyl-phosphate synthase small subunit 0.58 UW163_RS07480 glutamate 5-kinase
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS02200 carbamoyl-phosphate synthase small subunit 0.58 RALBFv3_RS06145 glutamate 5-kinase
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS14150 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.56 ABZR87_RS01810 glutamate 5-kinase
Erwinia tracheiphila SCR3 0.68 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.39 LU632_RS01185 proB glutamate 5-kinase low > 74
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.59 QEN71_RS27270 glutamate 5-kinase
Ralstonia solanacearum GMI1000 0.68 RS_RS07620 carbamoyl-phosphate synthase small subunit 0.57 RS_RS14095 glutamate 5-kinase
Herbaspirillum seropedicae SmR1 0.68 HSERO_RS06920 carbamoyl phosphate synthase small subunit 0.59 HSERO_RS01815 gamma-glutamyl kinase
Rhodanobacter denitrificans FW104-10B01 0.67 LRK54_RS17995 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.36 LRK54_RS02375 glutamate 5-kinase
Rhodanobacter denitrificans MT42 0.66 LRK55_RS17850 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.36 LRK55_RS02130 glutamate 5-kinase
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS14195 carbamoyl phosphate synthase small subunit 0.58 BPHYT_RS17110 glutamate 5-kinase
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.31 ABZR86_RS08685 glutamate 5-kinase
Variovorax sp. OAS795 0.66 ABID97_RS17090 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.55 ABID97_RS23400 glutamate 5-kinase
Acidovorax sp. GW101-3H11 0.66 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.54 Ac3H11_4771 Glutamate 5-kinase (EC 2.7.2.11)
Paraburkholderia graminis OAS925 0.66 ABIE53_003005 carbamoyl-phosphate synthase small subunit 0.58 ABIE53_003588 glutamate 5-kinase
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_07300 carbamoyl phosphate synthase small subunit 0.34 OKGIIK_09420 proB glutamate 5-kinase low > 52
Variovorax sp. SCN45 0.66 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.53 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_04402 carbamoyl-phosphate synthase small subunit 0.58 H281DRAFT_06264 glutamate 5-kinase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF4899 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.53 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA
Castellaniella sp019104865 MT123 0.62 ABCV34_RS15505 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.59 ABCV34_RS10800 glutamate 5-kinase
Phaeobacter inhibens DSM 17395 0.52 PGA1_c06670 carbamoyl-phosphate synthase small chain 0.36 PGA1_c15510 glutamate 5-kinase ProB 0.69 30
Azospirillum sp. SherDot2 0.52 MPMX19_00757 Carbamoyl-phosphate synthase small chain 0.39 MPMX19_01933 Glutamate 5-kinase
Azospirillum brasilense Sp245 0.51 AZOBR_RS10920 carbamoyl phosphate synthase small subunit 0.40 AZOBR_RS04095 glutamate 5-kinase
Rhodospirillum rubrum S1H 0.50 Rru_A2885 Carbamoyl-phosphate synthase, small subunit (NCBI) 0.39 Rru_A1239 Glutamate 5-kinase, ProB-related (NCBI) 0.66 42
Magnetospirillum magneticum AMB-1 0.50 AMB_RS03600 carbamoyl-phosphate synthase small subunit 0.42 AMB_RS20630 glutamate 5-kinase
Rhodopseudomonas palustris CGA009 0.50 TX73_006555 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.41 TX73_000850 glutamate 5-kinase
Brevundimonas sp. GW460-12-10-14-LB2 0.50 A4249_RS16140 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.32 A4249_RS16125 glutamate 5-kinase
Dinoroseobacter shibae DFL-12 0.49 Dshi_2387 carbamoyl-phosphate synthase, small subunit (RefSeq) 0.37 Dshi_1467 glutamate 5-kinase (RefSeq)
Sinorhizobium meliloti 1021 0.48 SMc01569 carbamoyl phosphate synthase small subunit 0.41 SMc03776 gamma-glutamyl kinase 0.58 71
Bosea sp. OAE506 0.47 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.37 ABIE41_RS07585 glutamate 5-kinase
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit 0.30 Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) (from data)
Rhizobium sp. OAE497 0.47 ABIE40_RS12765 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.40 ABIE40_RS18920 glutamate 5-kinase
Agrobacterium fabrum C58 0.47 Atu2170 carbamoylphosphate synthase small chain 0.40 Atu2780 gamma-glutamyl kinase
Caulobacter crescentus NA1000 0.47 CCNA_02925 carbamoyl-phosphate synthase small chain 0.37 CCNA_00316 glutamate 5-kinase
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_02925 carbamoyl-phosphate synthase small chain 0.37 CCNA_00316 glutamate 5-kinase low > 67
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_2122 carA carbamoyl phosphate synthase small subunit 0.40 Synpcc7942_2197 proB gamma-glutamyl kinase
Bifidobacterium breve UCC2003 0.39 BBR_RS13630 carbamoyl-phosphate synthase small subunit 0.33 BBR_RS19445 glutamate 5-kinase low > 34
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS15240 carbamoyl phosphate synthase small subunit 0.27 CA265_RS20855 glutamate 5-kinase (EC 2.7.2.11) (from data)
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_2370 carbamoyl phosphate synthase small subunit (RefSeq) 0.38 DvMF_1377 gamma-glutamyl kinase (RefSeq) 0.70 21
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_0226 carbamoyl-phosphate synthase, small subunit 0.29 Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) (from data)
Desulfovibrio vulgaris Hildenborough JW710 0.38 DVU3113 carA carbamoyl-phosphate synthase, small subunit (TIGR) 0.39 DVU0930 proB glutamate 5-kinase (TIGR)
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_19490 carbamoyl phosphate synthase small subunit 0.28 CA264_07725 glutamate 5-kinase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS17830 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.27 ABZR88_RS22170 glutamate 5-kinase
Mycobacterium tuberculosis H37Rv 0.38 Rv1383 Probable carbamoyl-phosphate synthase small chain CarA (carbamoyl-phosphate synthetase glutamine chain) 0.31 Rv2439c Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK)
Bacteroides thetaiotaomicron VPI-5482 0.33 BT0556 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) 0.25 BT3719 glutamate 5-kinase (EC 2.7.2.11) (from data) low > 81
Bacteroides ovatus ATCC 8483 0.33 BACOVA_03753 carbamoyl-phosphate synthase, small subunit 0.25 BACOVA_03537 glutamate 5-kinase low > 94
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS06875 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.27 HMPREF1058_RS08650 glutamate 5-kinase low > 67
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS20670 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.25 ABI39_RS02880 glutamate 5-kinase low > 72
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS01295 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.26 HMPREF1078_RS10650 glutamate 5-kinase low > 61
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS16070 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.25 HMPREF1181_RS03325 glutamate 5-kinase low > 56

Not shown: 4 genomes with orthologs for PP_4724 only; 0 genomes with orthologs for PP_0691 only