Conservation of cofitness between HSERO_RS01815 and HSERO_RS02650 in Herbaspirillum seropedicae SmR1

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01815 gamma-glutamyl kinase 1.0 HSERO_RS02650 dihydroxy-acid dehydratase 0.89 1
Dechlorosoma suillum PS 0.71 Dsui_0166 glutamate 5-kinase 0.74 Dsui_1122 dihydroxy-acid dehydratase — —
Cupriavidus basilensis FW507-4G11 0.71 RR42_RS17940 gamma-glutamyl kinase 0.29 RR42_RS16210 dihydroxy-acid dehydratase — —
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS27270 glutamate 5-kinase 0.73 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Ralstonia solanacearum UW163 0.70 UW163_RS07480 glutamate 5-kinase 0.29 UW163_RS09135 dihydroxy-acid dehydratase — —
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS06145 glutamate 5-kinase 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase — —
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS01810 glutamate 5-kinase 0.74 ABZR87_RS00240 dihydroxy-acid dehydratase low > 80
Paraburkholderia graminis OAS925 0.70 ABIE53_003588 glutamate 5-kinase 0.72 ABIE53_006513 dihydroxy-acid dehydratase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_06264 glutamate 5-kinase 0.73 H281DRAFT_05312 dihydroxyacid dehydratase low > 103
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS17110 glutamate 5-kinase 0.77 BPHYT_RS10100 dihydroxy-acid dehydratase — —
Ralstonia solanacearum PSI07 0.69 RPSI07_RS11095 glutamate 5-kinase 0.29 RPSI07_RS12840 dihydroxy-acid dehydratase — —
Ralstonia solanacearum GMI1000 0.69 RS_RS14095 glutamate 5-kinase 0.29 RS_RS12105 dihydroxy-acid dehydratase — —
Variovorax sp. OAS795 0.67 ABID97_RS23400 glutamate 5-kinase 0.29 ABID97_RS17500 dihydroxy-acid dehydratase — —
Variovorax sp. SCN45 0.65 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.29 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Acidovorax sp. GW101-3H11 0.65 Ac3H11_4771 Glutamate 5-kinase (EC 2.7.2.11) 0.73 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.70 55
Castellaniella sp019104865 MT123 0.65 ABCV34_RS10800 glutamate 5-kinase 0.73 ABCV34_RS14810 dihydroxy-acid dehydratase low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.65 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 90
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.71 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS25360 glutamate 5-kinase 0.71 PFLU_RS28535 dihydroxy-acid dehydratase 0.55 14
Pseudomonas fluorescens SBW25 0.60 PFLU_RS25360 glutamate 5-kinase 0.71 PFLU_RS28535 dihydroxy-acid dehydratase 0.55 21
Pseudomonas simiae WCS417 0.60 PS417_23545 gamma-glutamyl kinase 0.71 PS417_26890 dihydroxy-acid dehydratase 0.66 12
Pseudomonas sp. S08-1 0.59 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA 0.71 OH686_14100 dihydroxy-acid dehydratase 0.62 60
Pseudomonas sp. RS175 0.58 PFR28_03769 Glutamate 5-kinase 0.72 PFR28_04278 Dihydroxy-acid dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_0704 glutamate 5-kinase 0.71 Psyr_0469 dihydroxyacid dehydratase 0.94 4
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.72 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 103
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_0704 glutamate 5-kinase 0.71 Psyr_0469 dihydroxyacid dehydratase 0.90 5
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_15815 gamma-glutamyl kinase 0.72 AO356_13250 dihydroxy-acid dehydratase 0.68 12
Pseudomonas putida KT2440 0.57 PP_0691 Glutamate 5-kinase 0.72 PP_5128 Dihydroxy-acid dehydratase 0.37 31
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.71 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.86 28
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_14115 gamma-glutamyl kinase 0.72 AO353_08345 dihydroxy-acid dehydratase 0.78 6
Pseudomonas stutzeri RCH2 0.57 Psest_3384 glutamate 5-kinase 0.71 Psest_0234 dihydroxy-acid dehydratase — —
Marinobacter adhaerens HP15 0.54 HP15_508 gamma-glutamyl kinase 0.67 HP15_595 dihydroxy-acid dehydratase — —
Acinetobacter radioresistens SK82 0.48 MPMX26_02135 Glutamate 5-kinase 0.29 MPMX26_03019 Dihydroxy-acid dehydratase 0.78 9
Shewanella amazonensis SB2B 0.41 Sama_2516 gamma-glutamyl kinase (RefSeq) 0.70 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.96 3
Shewanella loihica PV-4 0.41 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.69 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.98 22
Magnetospirillum magneticum AMB-1 0.40 AMB_RS20630 glutamate 5-kinase 0.70 AMB_RS12770 dihydroxy-acid dehydratase — —
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_2197 proB gamma-glutamyl kinase 0.74 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase — —
Azospirillum sp. SherDot2 0.40 MPMX19_01933 Glutamate 5-kinase 0.73 MPMX19_05356 Dihydroxy-acid dehydratase — —
Klebsiella michiganensis M5al 0.40 BWI76_RS05840 glutamate 5-kinase 0.73 BWI76_RS00975 dihydroxy-acid dehydratase 0.90 3
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2651 glutamate 5-kinase 0.73 EX28DRAFT_4443 dihydroxy-acid dehydratase 0.82 27
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.73 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Escherichia coli BW25113 0.39 b0242 proB gamma-glutamyl kinase (NCBI) 0.73 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.96 4
Escherichia coli ECOR38 0.39 HEPCGN_07780 proB Glutamate 5-kinase 0.73 HEPCGN_13350 ilvD dihydroxy-acid dehydratase 0.97 3
Escherichia coli ECRC99 0.39 KEDOAH_18480 proB Glutamate 5-kinase 0.73 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Enterobacter sp. TBS_079 0.39 MPMX20_00927 Glutamate 5-kinase 0.73 MPMX20_04499 Dihydroxy-acid dehydratase 0.95 2
Escherichia coli ECOR27 0.39 NOLOHH_02050 proB Glutamate 5-kinase 0.74 NOLOHH_06775 ilvD dihydroxy-acid dehydratase 0.96 12
Escherichia coli ECRC62 0.39 BNILDI_00245 proB Glutamate 5-kinase 0.74 BNILDI_04750 ilvD dihydroxy-acid dehydratase 0.90 62
Escherichia coli ECRC101 0.39 MCAODC_00195 proB Glutamate 5-kinase 0.73 MCAODC_05145 ilvD dihydroxy-acid dehydratase 0.90 18
Escherichia coli ECRC100 0.39 OKFHMN_09675 proB Glutamate 5-kinase 0.73 OKFHMN_14640 ilvD dihydroxy-acid dehydratase 0.95 30
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03398 Glutamate 5-kinase 0.74 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli ECRC98 0.39 JDDGAC_13300 proB Glutamate 5-kinase 0.73 JDDGAC_18260 ilvD dihydroxy-acid dehydratase 0.90 7
Escherichia coli ECRC102 0.39 NIAGMN_07535 proB Glutamate 5-kinase 0.73 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia coli BL21 0.39 ECD_00239 gamma-glutamate kinase 0.74 ECD_03649 dihydroxyacid dehydratase 0.86 28
Escherichia fergusonii Becca 0.39 EFB2_03778 Glutamate 5-kinase 0.74 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli Nissle 1917 0.39 ECOLIN_RS01825 glutamate 5-kinase 0.74 ECOLIN_RS21665 dihydroxy-acid dehydratase 0.94 2
Rahnella sp. WP5 0.39 EX31_RS20980 glutamate 5-kinase 0.69 EX31_RS15005 dihydroxy-acid dehydratase 0.98 1
Serratia liquefaciens MT49 0.38 IAI46_04430 glutamate 5-kinase 0.71 IAI46_24345 dihydroxy-acid dehydratase low > 86
Pantoea sp. MT58 0.38 IAI47_15120 glutamate 5-kinase 0.72 IAI47_01035 dihydroxy-acid dehydratase 0.93 6
Agrobacterium fabrum C58 0.38 Atu2780 gamma-glutamyl kinase 0.72 Atu1918 dihydroxy-acid dehydratase — —
Sinorhizobium meliloti 1021 0.38 SMc03776 gamma-glutamyl kinase 0.74 SMc04045 dihydroxy-acid dehydratase 0.91 2
Shewanella oneidensis MR-1 0.37 SO1121 proB glutamate 5-kinase (NCBI ptt file) 0.69 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.98 7
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_1377 gamma-glutamyl kinase (RefSeq) 0.36 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) 0.87 28
Azospirillum brasilense Sp245 0.37 AZOBR_RS04095 glutamate 5-kinase 0.74 AZOBR_RS15015 dihydroxy-acid dehydratase — —
Erwinia tracheiphila SCR3 0.37 LU632_RS01185 proB glutamate 5-kinase 0.70 LU632_RS24400 ilvD dihydroxy-acid dehydratase 0.73 44
Rhizobium sp. OAE497 0.37 ABIE40_RS18920 glutamate 5-kinase 0.74 ABIE40_RS08005 dihydroxy-acid dehydratase 0.85 51
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_11575 glutamate 5-kinase 0.72 CSW01_00140 dihydroxy-acid dehydratase low > 62
Phaeobacter inhibens DSM 17395 0.37 PGA1_c15510 glutamate 5-kinase ProB 0.69 PGA1_c29490 dihydroxy-acid dehydratase LivD 0.79 21
Shewanella sp. ANA-3 0.37 Shewana3_0954 gamma-glutamyl kinase (RefSeq) 0.70 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.97 3
Dinoroseobacter shibae DFL-12 0.37 Dshi_1467 glutamate 5-kinase (RefSeq) 0.28 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) — —
Rhodospirillum rubrum S1H 0.37 Rru_A1239 Glutamate 5-kinase, ProB-related (NCBI) 0.68 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) low > 58
Desulfovibrio vulgaris Hildenborough JW710 0.36 DVU0930 proB glutamate 5-kinase (TIGR) 0.37 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) 0.86 18
Rhodopseudomonas palustris CGA009 0.36 TX73_000850 glutamate 5-kinase 0.73 TX73_007515 dihydroxy-acid dehydratase — —
Dickeya dadantii 3937 0.36 DDA3937_RS16535 glutamate 5-kinase 0.73 DDA3937_RS20155 dihydroxy-acid dehydratase 0.84 6
Dickeya dianthicola ME23 0.36 DZA65_RS17695 glutamate 5-kinase 0.73 DZA65_RS21335 dihydroxy-acid dehydratase 0.60 49
Dickeya dianthicola 67-19 0.36 HGI48_RS16605 glutamate 5-kinase 0.73 HGI48_RS20295 dihydroxy-acid dehydratase low > 71
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS02375 glutamate 5-kinase 0.25 LRK54_RS10320 dihydroxy-acid dehydratase 0.80 13
Rhodanobacter denitrificans MT42 0.35 LRK55_RS02130 glutamate 5-kinase 0.24 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Pectobacterium carotovorum WPP14 0.35 HER17_RS04700 glutamate 5-kinase 0.72 HER17_RS01075 dihydroxy-acid dehydratase 0.91 24
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00316 glutamate 5-kinase 0.72 CCNA_03139 dihydroxy-acid dehydratase low > 67
Caulobacter crescentus NA1000 0.35 CCNA_00316 glutamate 5-kinase 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.94 6
Bosea sp. OAE506 0.35 ABIE41_RS07585 glutamate 5-kinase 0.26 ABIE41_RS15690 dihydroxy-acid dehydratase — —
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_09420 proB glutamate 5-kinase 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase low > 52
Alteromonas macleodii MIT1002 0.33 MIT1002_04056 Glutamate 5-kinase 0.71 MIT1002_04041 Dihydroxy-acid dehydratase low > 70
Lysobacter sp. OAE881 0.32 ABIE51_RS13370 glutamate 5-kinase 0.26 ABIE51_RS17540 dihydroxy-acid dehydratase 0.82 29
Bifidobacterium breve UCC2003 0.32 BBR_RS19445 glutamate 5-kinase 0.54 BBR_RS17635 dihydroxy-acid dehydratase low > 34
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.71 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.60 34
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS08685 glutamate 5-kinase 0.27 ABZR86_RS15945 dihydroxy-acid dehydratase 0.83 49
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS22170 glutamate 5-kinase 0.27 ABZR88_RS11575 dihydroxy-acid dehydratase 0.85 9
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.27 Echvi_2055 dihydroxy-acid dehydratase 0.74 21
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS16125 glutamate 5-kinase 0.25 A4249_RS10030 dihydroxy-acid dehydratase 0.98 27
Mycobacterium tuberculosis H37Rv 0.29 Rv2439c Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK) 0.29 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad) — —
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS20855 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.25 CA265_RS15795 dihydroxy-acid dehydratase 0.92 26
Phocaeicola vulgatus CL09T03C04 0.27 HMPREF1058_RS08650 glutamate 5-kinase 0.61 HMPREF1058_RS16815 dihydroxy-acid dehydratase 0.87 30
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.27 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase 0.91 8
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_07725 glutamate 5-kinase 0.28 CA264_06935 dihydroxy-acid dehydratase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.27 BT3719 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.61 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.91 9
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS10650 glutamate 5-kinase 0.62 HMPREF1078_RS16695 dihydroxy-acid dehydratase low > 61
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS02880 glutamate 5-kinase 0.61 ABI39_RS12715 dihydroxy-acid dehydratase 0.86 15
Bacteroides ovatus ATCC 8483 0.26 BACOVA_03537 glutamate 5-kinase 0.60 BACOVA_03302 dihydroxy-acid dehydratase 0.95 9
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS03325 glutamate 5-kinase 0.62 HMPREF1181_RS08335 dihydroxy-acid dehydratase 0.86 43

Not shown: 0 genomes with orthologs for HSERO_RS01815 only; 2 genomes with orthologs for HSERO_RS02650 only