Conservation of cofitness between HER17_RS01910 and HER17_RS19500 in Pectobacterium carotovorum WPP14

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01910 aspartate aminotransferase family protein 1.0 HER17_RS19500 ornithine carbamoyltransferase 0.93 6
Dickeya dadantii 3937 0.86 DDA3937_RS19450 aspartate aminotransferase family protein 0.88 DDA3937_RS01940 ornithine carbamoyltransferase 0.89 3
Dickeya dianthicola 67-19 0.86 HGI48_RS19570 aspartate aminotransferase family protein 0.88 HGI48_RS01915 ornithine carbamoyltransferase 0.86 10
Dickeya dianthicola ME23 0.86 DZA65_RS20655 aspartate aminotransferase family protein 0.88 DZA65_RS01985 ornithine carbamoyltransferase 0.90 5
Serratia liquefaciens MT49 0.82 IAI46_23590 aspartate aminotransferase family protein 0.85 IAI46_02320 ornithine carbamoyltransferase low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS26000 aspartate aminotransferase family protein 0.84 BWI76_RS03010 ornithine carbamoyltransferase 0.73 13
Rahnella sp. WP5 0.79 EX31_RS04630 aspartate aminotransferase family protein 0.84 EX31_RS12825 ornithine carbamoyltransferase 0.88 16
Escherichia coli ECOR27 0.79 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 NOLOHH_04090 argF ornithine carbamoyltransferase low > 75
Enterobacter sp. TBS_079 0.79 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.84 MPMX20_00556 Ornithine carbamoyltransferase subunit F 0.53 61
Escherichia coli BW25113 0.79 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.84 b4254 argI ornithine carbamoyltransferase 1 (NCBI) low > 76
Escherichia fergusonii Becca 0.79 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.84 EFB2_04281 Ornithine carbamoyltransferase subunit I low > 86
Escherichia coli BL21 0.79 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.85 ECD_04120 ornithine carbamoyltransferase 1 0.57 8
Pantoea sp. MT58 0.79 IAI47_01955 aspartate aminotransferase family protein 0.82 IAI47_16830 ornithine carbamoyltransferase 0.78 11
Escherichia coli ECRC62 0.78 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 BNILDI_07425 argF ornithine carbamoyltransferase low > 75
Escherichia coli Nissle 1917 0.78 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.84 ECOLIN_RS24665 ornithine carbamoyltransferase 0.55 41
Escherichia coli ECOR38 0.78 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.84 HEPCGN_10025 argF ornithine carbamoyltransferase 0.68 46
Escherichia coli ECRC100 0.78 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 OKFHMN_11835 argF ornithine carbamoyltransferase 0.89 16
Escherichia coli ECRC98 0.78 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 JDDGAC_15475 argF ornithine carbamoyltransferase low > 86
Escherichia coli ECRC99 0.78 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 KEDOAH_16320 argF ornithine carbamoyltransferase
Escherichia coli ECRC102 0.78 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 NIAGMN_09685 argF ornithine carbamoyltransferase
Escherichia coli ECRC101 0.78 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 MCAODC_02340 argF ornithine carbamoyltransferase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.84 GFF940 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.85 OHPLBJKB_03782 Ornithine carbamoyltransferase subunit I low > 73
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.84 EX28DRAFT_3461 ornithine carbamoyltransferase 0.68 43
Erwinia tracheiphila SCR3 0.77 LU632_RS22810 aspartate aminotransferase family protein 0.83 LU632_RS20900 argF ornithine carbamoyltransferase 0.88 12
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.61 Psyr_2685 ornithine carbamoyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.61 Psyr_2685 ornithine carbamoyltransferase low > 86
Pseudomonas sp. S08-1 0.67 OH686_21290 Succinylornithine transaminase 0.61 OH686_14335 ornithine carbamoyltransferase low > 80
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) 0.59 Pf6N2E2_2909 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_18725 acetylornithine aminotransferase 0.60 AO356_05275 ornithine carbamoyltransferase low > 104
Pseudomonas putida KT2440 0.67 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase 0.62 PP_1000 ornithine carbamoyltransferase, catabolic low > 96
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_1971 Succinylornithine transaminase (EC 2.6.1.81) 0.62 PfGW456L13_1873 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 87
Pseudomonas simiae WCS417 0.66 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.60 PS417_22335 ornithine carbamoyltransferase low > 88
Pseudomonas stutzeri RCH2 0.66 Psest_2719 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family 0.61 Psest_0271 ornithine carbamoyltransferase low > 67
Pseudomonas fluorescens SBW25 0.66 PFLU_RS23315 aspartate aminotransferase family protein 0.60 PFLU_RS23975 ornithine carbamoyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS23315 aspartate aminotransferase family protein 0.60 PFLU_RS23975 ornithine carbamoyltransferase low > 109
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.59 Pf1N1B4_616 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 87
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_03025 acetylornithine aminotransferase 0.60 AO353_03475 ornithine carbamoyltransferase low > 101
Shewanella loihica PV-4 0.65 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.28 Shew_0204 ornithine carbamoyltransferase (RefSeq) 0.71 33
Shewanella oneidensis MR-1 0.65 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.30 SO0277 argF ornithine carbamoyltransferase (NCBI ptt file) low > 76
Pseudomonas sp. RS175 0.65 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase 0.59 PFR28_02179 Ornithine carbamoyltransferase, catabolic low > 88
Shewanella amazonensis SB2B 0.65 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.29 Sama_0258 ornithine carbamoyltransferase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase 0.25 MIT1002_00469 Ornithine carbamoyltransferase 0.98 22
Shewanella sp. ANA-3 0.65 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.30 Shewana3_3903 ornithine carbamoyltransferase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_13250 aspartate aminotransferase family protein 0.73 CSW01_12720 ornithine carbamoyltransferase low > 62
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_2221 acetylornithine and succinylornithine transaminases/succinylornithine transaminase family 0.14 B158DRAFT_1975 Ornithine carbamoyltransferase low > 40
Paraburkholderia graminis OAS925 0.61 ABIE53_001769 succinylornithine aminotransferase 0.28 ABIE53_003354 ornithine carbamoyltransferase
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS07695 acetylornithine aminotransferase 0.59 BPHYT_RS27685 ornithine carbamoyltransferase
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS23375 aspartate aminotransferase family protein 0.59 QEN71_RS33040 ornithine carbamoyltransferase
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_06478 succinylornithine aminotransferase apoenzyme 0.29 H281DRAFT_04119 ornithine carbamoyltransferase low > 103
Marinobacter adhaerens HP15 0.60 HP15_3042 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.67 HP15_3987 ornithine carbamoyltransferase low > 73
Acinetobacter radioresistens SK82 0.60 MPMX26_02251 Succinylornithine transaminase 0.28 MPMX26_01287 Ornithine carbamoyltransferase 1, anabolic low > 36
Lysobacter sp. OAE881 0.48 ABIE51_RS17420 acetylornithine/succinyldiaminopimelate transaminase 0.18 ABIE51_RS13410 N-acetylornithine carbamoyltransferase 0.82 33
Rhodanobacter denitrificans MT42 0.46 LRK55_RS06335 acetylornithine/succinylornithine family transaminase 0.19 LRK55_RS02170 N-acetylornithine carbamoyltransferase low > 63
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS17400 acetylornithine transaminase 0.18 ABZR86_RS08730 N-acetylornithine carbamoyltransferase low > 74
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_17070 astC acetylornithine transaminase 0.19 OKGIIK_09480 argF N-acetylornithine carbamoyltransferase low > 52
Bosea sp. OAE506 0.44 ABIE41_RS04340 aspartate aminotransferase family protein 0.26 ABIE41_RS04335 ornithine carbamoyltransferase
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1117.1 hypothetical protein 0.19 Xcc-8004.2316.1 N-acetylornithine carbamoyltransferase (EC 2.1.3.9) low > 74
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS06590 acetylornithine/succinylornithine family transaminase 0.19 LRK54_RS02415 N-acetylornithine carbamoyltransferase low > 59
Rhodopseudomonas palustris CGA009 0.42 TX73_024810 aspartate aminotransferase family protein 0.28 TX73_024805 ornithine carbamoyltransferase
Agrobacterium fabrum C58 0.42 Atu0428 acetylornithine aminotransferase 0.28 Atu0429 ornithine carbamoyltransferase
Rhizobium sp. OAE497 0.42 ABIE40_RS02320 aspartate aminotransferase family protein 0.58 ABIE40_RS23740 ornithine carbamoyltransferase low > 107
Caulobacter crescentus NA1000 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.27 CCNA_02325 ornithine carbamoyltransferase
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.27 CCNA_02325 ornithine carbamoyltransferase low > 67
Methanococcus maripaludis S2 0.41 MMP_RS05690 acetylornithine transaminase 0.28 MMP_RS02925 ornithine carbamoyltransferase
Methanococcus maripaludis JJ 0.41 MMJJ_RS08660 acetylornithine transaminase 0.29 MMJJ_RS02150 ornithine carbamoyltransferase
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_3205 transaminase, acetylornithine/succinylornithine family 0.26 Ga0059261_3206 ornithine carbamoyltransferase 0.98 9
Azospirillum brasilense Sp245 0.40 AZOBR_RS19025 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] (from data) 0.61 AZOBR_RS13250 ornithine carbamoyltransferase
Magnetospirillum magneticum AMB-1 0.40 AMB_RS01605 aspartate aminotransferase family protein 0.29 AMB_RS01610 ornithine carbamoyltransferase
Azospirillum sp. SherDot2 0.39 MPMX19_02177 Succinylornithine transaminase/acetylornithine aminotransferase 0.30 MPMX19_02178 Ornithine carbamoyltransferase, anabolic
Sinorhizobium meliloti 1021 0.39 SMc02138 acetylornithine transaminase 0.59 SMa0695 ornithine carbamoyltransferase low > 103
Phaeobacter inhibens DSM 17395 0.39 PGA1_c24230 acetylornithine aminotransferase ArgD 0.28 PGA1_c24220 ornithine carbamoyltransferase ArgF 0.93 2
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS11925 aspartate aminotransferase family protein 0.27 A4249_RS11920 ornithine carbamoyltransferase
Rhodospirillum rubrum S1H 0.38 Rru_A1147 Acetylornithine and succinylornithine aminotransferase (NCBI) 0.30 Rru_A3276 Ornithine carbamoyltransferase (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.36 Dshi_0798 acetylornithine and succinylornithine aminotransferase (RefSeq) 0.62 Dshi_0433 ornithine carbamoyltransferase (RefSeq)
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_0943 argD acetylornithine aminotransferase 0.29 Synpcc7942_2514 argF ornithine carbamoyltransferase
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU2347 argD acetylornithine aminotransferase (TIGR) 0.30 DVU1096 argF ornithine carbamoyltransferase (TIGR) 0.99 3
Dechlorosoma suillum PS 0.35 Dsui_0023 acetylornithine/succinylornithine aminotransferase 0.28 Dsui_3249 ornithine carbamoyltransferase
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_3149 acetylornithine aminotransferase (RefSeq) 0.31 DvMF_0046 ornithine carbamoyltransferase (RefSeq) 0.97 8
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS04665 acetylornithine transaminase 0.28 RALBFv3_RS05185 ornithine carbamoyltransferase
Ralstonia solanacearum UW163 0.34 UW163_RS09005 acetylornithine transaminase 0.28 UW163_RS08440 ornithine carbamoyltransferase
Mycobacterium tuberculosis H37Rv 0.34 Rv1655 Probable acetylornithine aminotransferase ArgD 0.30 Rv1656 Probable ornithine carbamoyltransferase, anabolic ArgF
Castellaniella sp019104865 MT123 0.33 ABCV34_RS12095 acetylornithine transaminase 0.30 ABCV34_RS05380 ornithine carbamoyltransferase
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS00285 acetylornithine transaminase 0.28 ABZR87_RS00840 ornithine carbamoyltransferase
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS16670 acetylornithine aminotransferase 0.26 HSERO_RS07185 Ornithine carbamoyltransferase (EC 2.1.3.3) (from data)
Ralstonia solanacearum PSI07 0.33 RPSI07_RS12720 acetylornithine transaminase 0.29 RPSI07_RS12115 ornithine carbamoyltransferase
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS16955 acetylornithine aminotransferase 0.27 RR42_RS17175 ornithine carbamoyltransferase
Acidovorax sp. GW101-3H11 0.33 Ac3H11_1332 Acetylornithine aminotransferase (EC 2.6.1.11) 0.27 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3)
Ralstonia solanacearum GMI1000 0.32 RS_RS12225 aspartate aminotransferase family protein 0.29 RS_RS12805 ornithine carbamoyltransferase
Variovorax sp. OAS795 0.31 ABID97_RS08635 aspartate aminotransferase family protein 0.28 ABID97_RS08630 ornithine carbamoyltransferase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3420 Acetylornithine aminotransferase (EC 2.6.1.11) 0.26 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3)
Variovorax sp. SCN45 0.31 GFF3927 N-acetylornithine aminotransferase (EC 2.6.1.11) 0.28 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3)
Bifidobacterium breve UCC2003 0.29 BBR_RS13900 acetylornithine transaminase 0.31 BBR_RS13905 ornithine carbamoyltransferase low > 34
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS12615 ornithine--oxo-acid transaminase 0.10 HMPREF1078_RS10660 acetylornithine carbamoyltransferase low > 61
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS03445 aspartate aminotransferase family protein 0.10 HMPREF1181_RS03315 N-acetylornithine carbamoyltransferase 0.98 5
Bacteroides thetaiotaomicron VPI-5482 0.28 BT3758 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.10 BT3717 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) 0.91 2
Bacteroides ovatus ATCC 8483 0.27 BACOVA_03588 aminotransferase, class III 0.10 BACOVA_03533 N-acetylornithine carbamoyltransferase 0.97 4
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS15500 aspartate aminotransferase family protein 0.11 ABZR88_RS15495 acetylornithine carbamoyltransferase
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_15645 ornithine--oxo-acid transaminase 0.10 CA264_06240 acetylornithine carbamoyltransferase low > 74

Not shown: 2 genomes with orthologs for HER17_RS01910 only; 2 genomes with orthologs for HER17_RS19500 only