Conservation of cofitness between HER17_RS04700 and HER17_RS02900 in Pectobacterium carotovorum WPP14

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04700 glutamate 5-kinase 1.0 HER17_RS02900 carbamoyl-phosphate synthase large subunit 0.92 5
Rahnella sp. WP5 0.90 EX31_RS20980 glutamate 5-kinase 0.95 EX31_RS03830 carbamoyl-phosphate synthase large subunit 0.96 25
Serratia liquefaciens MT49 0.90 IAI46_04430 glutamate 5-kinase 0.96 IAI46_03195 carbamoyl-phosphate synthase large subunit low > 86
Enterobacter sp. TBS_079 0.89 MPMX20_00927 Glutamate 5-kinase 0.95 MPMX20_00740 Carbamoyl-phosphate synthase large chain 0.90 30
Klebsiella michiganensis M5al 0.89 BWI76_RS05840 glutamate 5-kinase 0.95 BWI76_RS04470 carbamoyl phosphate synthase large subunit 0.59 78
Pantoea sp. MT58 0.89 IAI47_15120 glutamate 5-kinase 0.94 IAI47_16115 carbamoyl-phosphate synthase large subunit 0.92 8
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2651 glutamate 5-kinase 0.96 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Dickeya dianthicola 67-19 0.89 HGI48_RS16605 glutamate 5-kinase 0.96 HGI48_RS18240 carbamoyl-phosphate synthase large subunit low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.95 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) low > 78
Escherichia coli ECOR38 0.88 HEPCGN_07780 proB Glutamate 5-kinase 0.95 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit 0.85 69
Escherichia coli ECOR27 0.88 NOLOHH_02050 proB Glutamate 5-kinase 0.95 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli BW25113 0.88 b0242 proB gamma-glutamyl kinase (NCBI) 0.95 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) 0.85 57
Escherichia coli ECRC102 0.88 NIAGMN_07535 proB Glutamate 5-kinase 0.95 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC100 0.88 OKFHMN_09675 proB Glutamate 5-kinase 0.95 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit low > 80
Escherichia coli ECRC101 0.88 MCAODC_00195 proB Glutamate 5-kinase 0.95 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit 0.78 56
Escherichia coli ECRC99 0.88 KEDOAH_18480 proB Glutamate 5-kinase 0.95 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia fergusonii Becca 0.88 EFB2_03778 Glutamate 5-kinase 0.95 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03398 Glutamate 5-kinase 0.95 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain low > 73
Dickeya dianthicola ME23 0.88 DZA65_RS17695 glutamate 5-kinase 0.96 DZA65_RS19380 carbamoyl-phosphate synthase large subunit 0.73 17
Escherichia coli BL21 0.88 ECD_00239 gamma-glutamate kinase 0.95 ECD_00037 carbamoyl-phosphate synthase large subunit low > 61
Erwinia tracheiphila SCR3 0.88 LU632_RS01185 proB glutamate 5-kinase 0.92 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit low > 74
Escherichia coli ECRC62 0.88 BNILDI_00245 proB Glutamate 5-kinase 0.95 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli ECRC98 0.88 JDDGAC_13300 proB Glutamate 5-kinase 0.95 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit 0.83 39
Escherichia coli Nissle 1917 0.88 ECOLIN_RS01825 glutamate 5-kinase 0.95 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit 0.84 25
Dickeya dadantii 3937 0.88 DDA3937_RS16535 glutamate 5-kinase 0.96 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit 0.81 10
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_11575 glutamate 5-kinase 0.87 CSW01_12100 carbamoyl-phosphate synthase large chain low > 62
Shewanella loihica PV-4 0.62 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.84 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.88 55
Shewanella amazonensis SB2B 0.62 Sama_2516 gamma-glutamyl kinase (RefSeq) 0.85 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 62
Shewanella sp. ANA-3 0.59 Shewana3_0954 gamma-glutamyl kinase (RefSeq) 0.84 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.92 35
Shewanella oneidensis MR-1 0.59 SO1121 proB glutamate 5-kinase (NCBI ptt file) 0.84 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) 0.90 55
Dechlorosoma suillum PS 0.40 Dsui_0166 glutamate 5-kinase 0.68 Dsui_3064 carbamoyl-phosphate synthase, large subunit
Pseudomonas fluorescens SBW25 0.39 PFLU_RS25360 glutamate 5-kinase 0.75 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS25360 glutamate 5-kinase 0.75 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas simiae WCS417 0.39 PS417_23545 gamma-glutamyl kinase 0.75 PS417_24040 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.75 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_14115 gamma-glutamyl kinase 0.75 AO353_05630 carbamoyl phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_0704 glutamate 5-kinase 0.75 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_0704 glutamate 5-kinase 0.75 Psyr_4191 carbamoyl-phosphate synthase large subunit
Paraburkholderia graminis OAS925 0.37 ABIE53_003588 glutamate 5-kinase 0.67 ABIE53_003004 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.75 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS17110 glutamate 5-kinase 0.67 BPHYT_RS14190 carbamoyl phosphate synthase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_06264 glutamate 5-kinase 0.66 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS27270 glutamate 5-kinase 0.66 QEN71_RS04780 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.75 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS06145 glutamate 5-kinase 0.67 RALBFv3_RS02190 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum UW163 0.36 UW163_RS07480 glutamate 5-kinase 0.67 UW163_RS15500 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_15815 gamma-glutamyl kinase 0.75 AO356_07480 carbamoyl phosphate synthase large subunit low > 104
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_2197 proB gamma-glutamyl kinase 0.57 Synpcc7942_0711 carB carbamoyl phosphate synthase large subunit
Pseudomonas putida KT2440 0.36 PP_0691 Glutamate 5-kinase 0.75 PP_4723 Carbamoyl-phosphate synthase large chain 0.83 1
Pseudomonas sp. RS175 0.36 PFR28_03769 Glutamate 5-kinase 0.76 PFR28_00077 Carbamoyl-phosphate synthase large chain
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS01815 gamma-glutamyl kinase 0.67 HSERO_RS06925 carbamoyl phosphate synthase large subunit
Variovorax sp. OAS795 0.36 ABID97_RS23400 glutamate 5-kinase 0.67 ABID97_RS17080 carbamoyl-phosphate synthase large subunit
Azospirillum brasilense Sp245 0.36 AZOBR_RS04095 glutamate 5-kinase 0.59 AZOBR_RS12895 carbamoyl phosphate synthase large subunit
Pseudomonas sp. S08-1 0.36 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA 0.75 OH686_17080 Carbamoyl-phosphate synthase large chain
Azospirillum sp. SherDot2 0.36 MPMX19_01933 Glutamate 5-kinase 0.58 MPMX19_02299 Carbamoyl-phosphate synthase large chain
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS17940 gamma-glutamyl kinase 0.67 RR42_RS13510 carbamoyl phosphate synthase large subunit
Ralstonia solanacearum PSI07 0.35 RPSI07_RS11095 glutamate 5-kinase 0.67 RPSI07_RS15255 carbamoyl-phosphate synthase large subunit
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS01810 glutamate 5-kinase 0.67 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum GMI1000 0.35 RS_RS14095 glutamate 5-kinase 0.67 RS_RS07630 carbamoyl-phosphate synthase large chain
Castellaniella sp019104865 MT123 0.35 ABCV34_RS10800 glutamate 5-kinase 0.66 ABCV34_RS15510 carbamoyl-phosphate synthase large subunit
Pseudomonas stutzeri RCH2 0.35 Psest_3384 glutamate 5-kinase 0.75 Psest_0968 carbamoyl-phosphate synthase, large subunit
Dinoroseobacter shibae DFL-12 0.35 Dshi_1467 glutamate 5-kinase (RefSeq) 0.59 Dshi_2639 carbamoyl-phosphate synthase, large subunit (RefSeq)
Rhizobium sp. OAE497 0.34 ABIE40_RS18920 glutamate 5-kinase 0.58 ABIE40_RS12815 carbamoyl-phosphate synthase large subunit
Magnetospirillum magneticum AMB-1 0.34 AMB_RS20630 glutamate 5-kinase 0.60 AMB_RS03605 carbamoyl-phosphate synthase large subunit
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4771 Glutamate 5-kinase (EC 2.7.2.11) 0.68 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Rhodopseudomonas palustris CGA009 0.34 TX73_000850 glutamate 5-kinase 0.60 TX73_021090 carbamoyl-phosphate synthase large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.66 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Sinorhizobium meliloti 1021 0.34 SMc03776 gamma-glutamyl kinase 0.58 SMc01215 carbamoyl phosphate synthase large subunit 0.64 87
Agrobacterium fabrum C58 0.34 Atu2780 gamma-glutamyl kinase 0.58 Atu2178 carbamoylphosphate synthase large subunit
Acinetobacter radioresistens SK82 0.34 MPMX26_02135 Glutamate 5-kinase 0.72 MPMX26_00766 Carbamoyl-phosphate synthase large chain low > 36
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_00316 glutamate 5-kinase 0.59 CCNA_02994 carbamoyl-phosphate synthase large chain low > 67
Caulobacter crescentus NA1000 0.33 CCNA_00316 glutamate 5-kinase 0.59 CCNA_02994 carbamoyl-phosphate synthase large chain
Alteromonas macleodii MIT1002 0.33 MIT1002_04056 Glutamate 5-kinase 0.80 MIT1002_01467 Carbamoyl-phosphate synthase large chain low > 70
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_1377 gamma-glutamyl kinase (RefSeq) 0.57 DvMF_2306 carbamoyl-phosphate synthase, large subunit (RefSeq) 0.73 44
Rhodospirillum rubrum S1H 0.33 Rru_A1239 Glutamate 5-kinase, ProB-related (NCBI) 0.60 Rru_A2886 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) 0.69 27
Marinobacter adhaerens HP15 0.33 HP15_508 gamma-glutamyl kinase 0.74 HP15_3077 carbamoyl-phosphate synthase, large subunit
Variovorax sp. SCN45 0.33 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.67 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU0930 proB glutamate 5-kinase (TIGR) 0.59 DVU0162 carB carbamoyl-phosphate synthase, large subunit (TIGR)
Bifidobacterium breve UCC2003 0.31 BBR_RS19445 glutamate 5-kinase 0.49 BBR_RS13635 carbamoyl-phosphate synthase large subunit low > 34
Bosea sp. OAE506 0.31 ABIE41_RS07585 glutamate 5-kinase 0.58 ABIE41_RS11910 carbamoyl-phosphate synthase large subunit
Phaeobacter inhibens DSM 17395 0.31 PGA1_c15510 glutamate 5-kinase ProB 0.57 PGA1_c24560 carbamoyl-phosphate synthase large chain 0.72 41
Rhodanobacter denitrificans MT42 0.30 LRK55_RS02130 glutamate 5-kinase 0.70 LRK55_RS17855 carbamoyl-phosphate synthase large subunit
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS02375 glutamate 5-kinase 0.70 LRK54_RS18000 carbamoyl-phosphate synthase large subunit
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.70 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_09420 proB glutamate 5-kinase 0.70 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit low > 52
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS16125 glutamate 5-kinase 0.58 A4249_RS00725 carbamoyl-phosphate synthase large subunit
Mycobacterium tuberculosis H37Rv 0.29 Rv2439c Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK) 0.49 Rv1384 Probable carbamoyl-phosphate synthase large chain CarB (carbamoyl-phosphate synthetase ammonia chain)
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.43 Echvi_0768 carbamoyl-phosphate synthase, large subunit
Lysobacter sp. OAE881 0.28 ABIE51_RS13370 glutamate 5-kinase 0.69 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit low > 62
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS08685 glutamate 5-kinase 0.69 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS22170 glutamate 5-kinase 0.44 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS20855 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.43 CA265_RS20080 carbamoyl phosphate synthase large subunit
Parabacteroides merdae CL09T00C40 0.27 HMPREF1078_RS10650 glutamate 5-kinase 0.35 HMPREF1078_RS01300 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 61
Bacteroides ovatus ATCC 8483 0.26 BACOVA_03537 glutamate 5-kinase 0.35 BACOVA_03752 carbamoyl-phosphate synthase, large subunit low > 94
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_07725 glutamate 5-kinase 0.42 CA264_15430 carbamoyl phosphate synthase large subunit low > 74
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS03325 glutamate 5-kinase 0.35 HMPREF1181_RS16075 carbamoyl-phosphate synthase large subunit low > 56
Bacteroides thetaiotaomicron VPI-5482 0.25 BT3719 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.36 BT0557 carbamyl phosphate synthetase (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.25 HMPREF1058_RS08650 glutamate 5-kinase 0.36 HMPREF1058_RS06870 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 67
Phocaeicola dorei CL03T12C01 0.25 ABI39_RS02880 glutamate 5-kinase 0.36 ABI39_RS20665 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 72
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.61 Ga0059261_0007 carbamoyl-phosphate synthase, large subunit

Not shown: 0 genomes with orthologs for HER17_RS04700 only; 4 genomes with orthologs for HER17_RS02900 only