Conservation of cofitness between HP15_487 and HP15_3084 in Marinobacter adhaerens HP15

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_487 DNA repair protein RadA 1.0 HP15_3084 DNA repair protein RecN 0.87 4
Enterobacter sp. TBS_079 0.73 MPMX20_00694 DNA repair protein RadA 0.41 MPMX20_03486 DNA repair protein RecN low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_3597 DNA repair protein RadA 0.40 EX28DRAFT_2719 DNA repair protein RecN low > 76
Escherichia fergusonii Becca 0.72 EFB2_04057 DNA repair protein RadA 0.40 EFB2_01277 DNA repair protein RecN low > 86
Rahnella sp. WP5 0.72 EX31_RS04030 DNA repair protein RadA 0.43 EX31_RS21760 DNA repair protein RecN low > 89
Escherichia coli Nissle 1917 0.72 ECOLIN_RS25190 DNA repair protein RadA 0.40 ECOLIN_RS14775 DNA repair protein RecN low > 52
Escherichia coli BL21 0.72 ECD_04265 DNA repair protein 0.40 ECD_02504 recombination and repair protein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_03672 DNA repair protein RadA 0.40 OHPLBJKB_01091 DNA repair protein RecN low > 73
Escherichia coli BW25113 0.72 b4389 radA predicted repair protein (NCBI) 0.40 b2616 recN recombination and repair protein (NCBI) 0.55 2
Escherichia coli ECRC102 0.72 NIAGMN_09045 radA DNA repair protein RadA 0.40 NIAGMN_18915 recN DNA repair protein RecN — —
Escherichia coli ECOR27 0.72 NOLOHH_03520 radA DNA repair protein RadA 0.40 NOLOHH_12815 recN DNA repair protein RecN low > 57
Shewanella sp. ANA-3 0.72 Shewana3_1049 DNA repair protein RadA (RefSeq) 0.43 Shewana3_1104 recombination and repair protein (RefSeq) low > 73
Escherichia coli ECRC101 0.72 OKFHMN_11195 radA DNA repair protein RadA 0.40 OKFHMN_21145 recN DNA repair protein RecN — —
Escherichia coli ECRC99 0.72 KEDOAH_16960 radA DNA repair protein RadA 0.40 KEDOAH_07075 recN DNA repair protein RecN — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF1057 DNA repair protein RadA 0.41 GFF4162 DNA repair protein RecN low > 78
Escherichia coli ECRC98 0.72 JDDGAC_14790 radA DNA repair protein RadA 0.40 JDDGAC_24810 recN DNA repair protein RecN — —
Escherichia coli ECOR38 0.72 HEPCGN_09195 radA DNA repair protein RadA 0.40 HEPCGN_20265 recN DNA repair protein RecN low > 85
Escherichia coli ECRC62 0.72 BNILDI_08075 radA DNA repair protein RadA 0.40 BNILDI_11620 recN DNA repair protein RecN — —
Escherichia coli ECRC101 0.72 MCAODC_01710 radA DNA repair protein RadA 0.40 MCAODC_11670 recN DNA repair protein RecN — —
Klebsiella michiganensis M5al 0.72 BWI76_RS04165 DNA repair protein RadA 0.40 BWI76_RS21560 DNA repair protein RecN low > 92
Shewanella oneidensis MR-1 0.72 SO1226 radA DNA repair protein RadA (NCBI ptt file) 0.43 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.57 4
Pantoea sp. MT58 0.72 IAI47_16345 DNA repair protein RadA 0.42 IAI47_04810 DNA repair protein RecN low > 76
Serratia liquefaciens MT49 0.71 IAI46_02945 DNA repair protein RadA 0.41 IAI46_19635 DNA repair protein RecN low > 86
Erwinia tracheiphila SCR3 0.71 LU632_RS02550 radA DNA repair protein RadA 0.40 LU632_RS16985 recN DNA repair protein RecN low > 74
Alteromonas macleodii MIT1002 0.70 MIT1002_02706 Lon protease 2 0.38 MIT1002_01443 Recombination protein N low > 70
Shewanella amazonensis SB2B 0.70 Sama_0981 DNA repair protein RadA (RefSeq) 0.43 Sama_1026 recombination and repair protein (RefSeq) 0.68 4
Pectobacterium carotovorum WPP14 0.69 HER17_RS19085 DNA repair protein RadA 0.41 HER17_RS17420 DNA repair protein RecN low > 75
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11870 DNA repair protein RadA 0.41 CSW01_04395 DNA repair protein RecN low > 62
Dickeya dianthicola ME23 0.68 DZA65_RS02485 DNA repair protein RadA 0.40 DZA65_RS04235 DNA repair protein RecN low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS02380 DNA repair protein RadA 0.40 HGI48_RS04320 DNA repair protein RecN low > 71
Dickeya dadantii 3937 0.68 DDA3937_RS02420 DNA repair protein RadA 0.41 DDA3937_RS04325 DNA repair protein RecN low > 74
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_1442 DNA repair protein RadA 0.51 PfGW456L13_5106 DNA repair protein RecN 0.40 6
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_13980 DNA repair protein RadA 0.50 AO353_05660 DNA repair protein RecN 0.72 1
Pseudomonas sp. RS175 0.64 PFR28_03792 DNA repair protein RadA 0.49 PFR28_00071 DNA repair protein RecN low > 88
Pseudomonas fluorescens SBW25 0.64 PFLU_RS26230 DNA repair protein RadA 0.49 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_15680 DNA repair protein RadA 0.49 AO356_07510 DNA repair protein RecN 0.86 1
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_2768 DNA repair protein RadA 0.50 Pf1N1B4_1178 DNA repair protein RecN 0.35 8
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS26230 DNA repair protein RadA 0.49 PFLU_RS25910 DNA repair protein RecN 0.21 44
Pseudomonas simiae WCS417 0.64 PS417_24305 DNA repair protein RadA 0.49 PS417_24070 recombination and repair protein 0.54 2
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_5076 DNA repair protein RadA 0.51 Pf6N2E2_3370 DNA repair protein RecN 0.54 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_4275 DNA replication and repair protein RadA 0.49 Psyr_4197 DNA replication and repair protein RecN 0.45 7
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_4275 DNA replication and repair protein RadA 0.49 Psyr_4197 DNA replication and repair protein RecN low > 86
Pseudomonas sp. S08-1 0.64 OH686_16185 DNA repair protein RadA 0.50 OH686_17050 DNA repair protein RecN low > 80
Pseudomonas putida KT2440 0.64 PP_4644 DNA repair enzyme 0.49 PP_4729 factor used in recombination and DNA repair low > 96
Pseudomonas stutzeri RCH2 0.63 Psest_3401 DNA repair protein RadA 0.49 Psest_0962 DNA repair protein RecN 0.62 1
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_0877 DNA replication and repair protein RadA 0.40 B158DRAFT_0601 DNA replication and repair protein RecN 0.86 1
Acinetobacter radioresistens SK82 0.62 MPMX26_02235 DNA repair protein RadA 0.30 MPMX26_00239 DNA repair protein RecN low > 36
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.3812.1 DNA repair protein RadA 0.33 Xcc-8004.3431.1 DNA repair protein RecN low > 74
Lysobacter sp. OAE881 0.60 ABIE51_RS07685 DNA repair protein RadA 0.34 ABIE51_RS11655 DNA repair protein RecN low > 62
Rhodanobacter denitrificans MT42 0.59 LRK55_RS02280 DNA repair protein RadA 0.37 LRK55_RS17815 DNA repair protein RecN low > 63
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS02525 DNA repair protein RadA 0.37 LRK54_RS17960 DNA repair protein RecN 0.38 15
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_09580 radA DNA repair protein RadA 0.38 OKGIIK_07340 recN DNA repair protein RecN low > 52
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS08845 DNA repair protein RadA 0.40 ABZR86_RS05665 DNA repair protein RecN 0.93 1
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS11670 DNA repair protein RadA 0.36 ABZR87_RS01065 DNA repair protein RecN low > 80
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS12030 DNA repair protein RadA 0.36 RR42_RS05910 DNA repair protein — —
Ralstonia solanacearum GMI1000 0.54 RS_RS06880 DNA repair protein RadA 0.36 RS_RS13275 DNA repair protein RecN low > 80
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS00210 DNA repair protein RadA 0.37 RALBFv3_RS05415 DNA repair protein RecN low > 76
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS06320 DNA repair protein RadA 0.35 QEN71_RS26535 DNA repair protein RecN low > 153
Ralstonia solanacearum UW163 0.54 UW163_RS13540 DNA repair protein RadA 0.37 UW163_RS08210 DNA repair protein RecN — —
Dechlorosoma suillum PS 0.54 Dsui_2413 DNA repair protein RadA 0.39 Dsui_3072 DNA repair protein RecN low > 51
Ralstonia solanacearum PSI07 0.53 RPSI07_RS17270 DNA repair protein RadA 0.36 RPSI07_RS11890 DNA repair protein RecN low > 81
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS12235 DNA repair protein RadA 0.32 BPHYT_RS03560 DNA repair protein 0.18 38
Variovorax sp. SCN45 0.53 GFF5087 DNA repair protein RadA 0.31 GFF2357 DNA repair protein RecN low > 127
Paraburkholderia graminis OAS925 0.53 ABIE53_002526 DNA repair protein RadA/Sms 0.32 ABIE53_000856 DNA repair protein RecN (Recombination protein N) 0.30 25
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_00590 DNA replication and repair protein RadA 0.32 H281DRAFT_04692 DNA replication and repair protein RecN low > 103
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS10745 DNA repair protein RadA 0.38 HSERO_RS03060 DNA repair protein 0.44 14
Castellaniella sp019104865 MT123 0.51 ABCV34_RS02345 DNA repair protein RadA 0.35 ABCV34_RS07470 DNA repair protein RecN low > 48
Acidovorax sp. GW101-3H11 0.50 Ac3H11_3371 DNA repair protein RadA 0.34 Ac3H11_3460 DNA repair protein RecN low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1833 DNA repair protein RadA 0.33 GFF829 DNA repair protein RecN 0.51 79
Phocaeicola dorei CL03T12C01 0.43 ABI39_RS10420 DNA repair protein RadA 0.27 ABI39_RS14500 DNA repair protein RecN low > 72
Echinicola vietnamensis KMM 6221, DSM 17526 0.43 Echvi_1031 DNA repair protein RadA 0.29 Echvi_2067 DNA repair protein RecN 0.93 2
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS14715 DNA repair protein RadA 0.26 HMPREF1058_RS18225 DNA repair protein RecN 0.60 7
Dinoroseobacter shibae DFL-12 0.42 Dshi_2129 DNA repair protein RadA (RefSeq) 0.24 Dshi_2413 DNA repair protein RecN (RefSeq) 0.50 17
Bosea sp. OAE506 0.42 ABIE41_RS17800 DNA repair protein RadA 0.32 ABIE41_RS12645 DNA repair protein RecN 0.66 2
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_17125 DNA repair protein RadA 0.23 CA264_13235 DNA repair protein RecN 0.77 1
Bacteroides stercoris CC31F 0.42 HMPREF1181_RS00075 DNA repair protein RadA 0.28 HMPREF1181_RS10900 DNA repair protein RecN low > 56
Sinorhizobium meliloti 1021 0.42 SMc00556 DNA repair protein RadA 0.33 SMc01877 DNA repair protein 0.67 3
Phaeobacter inhibens DSM 17395 0.42 PGA1_c10840 DNA repair protein RadA 0.28 PGA1_c09720 DNA repair protein RecN 0.57 2
Agrobacterium fabrum C58 0.42 Atu1077 DNA repair protein 0.32 Atu2083 DNA repair protein RecN 0.66 2
Bacteroides ovatus ATCC 8483 0.42 BACOVA_03019 DNA repair protein RadA 0.27 BACOVA_00200 DNA repair protein RecN low > 94
Rhodopseudomonas palustris CGA009 0.42 TX73_015980 DNA repair protein RadA 0.28 TX73_018240 DNA repair protein RecN 0.45 33
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS22660 DNA repair protein RadA 0.26 CA265_RS14855 DNA repair protein RecN 0.39 54
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_0751 DNA repair protein RadA 0.28 Ga0059261_1026 DNA repair protein RecN 0.69 2
Bacteroides thetaiotaomicron VPI-5482 0.41 BT2406 putative DNA repair protein (NCBI ptt file) 0.27 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) 0.57 4
Parabacteroides merdae CL09T00C40 0.41 HMPREF1078_RS08395 DNA repair protein RadA 0.30 HMPREF1078_RS02000 DNA repair protein RecN low > 61
Azospirillum sp. SherDot2 0.41 MPMX19_00904 DNA repair protein RadA 0.28 MPMX19_01601 DNA repair protein RecN 0.56 9
Azospirillum brasilense Sp245 0.41 AZOBR_RS08320 DNA repair protein RadA 0.27 AZOBR_RS12395 DNA repair protein RecN — —
Magnetospirillum magneticum AMB-1 0.41 AMB_RS10555 DNA repair protein RadA 0.30 AMB_RS19520 DNA repair protein RecN — —
Caulobacter crescentus NA1000 0.41 CCNA_01732 DNA repair protein RadA 0.24 CCNA_02062 DNA repair protein recN 0.92 1
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_01732 DNA repair protein RadA 0.24 CCNA_02062 DNA repair protein recN low > 67
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_1452 radA DNA repair protein RadA 0.24 Synpcc7942_1779 recN DNA repair protein RecN low > 38
Rhodospirillum rubrum S1H 0.40 Rru_A0406 DNA repair protein RadA (NCBI) 0.25 Rru_A0940 DNA repair protein RecN (NCBI) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS20495 DNA repair protein RadA 0.29 ABZR88_RS06580 DNA repair protein RecN low > 71
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS03745 DNA repair protein RadA 0.24 A4249_RS02620 DNA repair protein RecN low > 48
Shewanella loihica PV-4 0.39 Shew_2807 DNA repair protein RadA (RefSeq) 0.42 Shew_1196 recombination and repair protein (RefSeq) 0.73 13
Desulfovibrio vulgaris Hildenborough JW710 0.36 DVU1590 radA DNA repair protein RadA (TIGR) 0.19 DVU2463 recN DNA repair protein RecN (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_0471 DNA repair protein RadA (RefSeq) 0.12 DvMF_0923 SMC domain protein (RefSeq) 0.46 1
Fusobacterium nucleatum SB010 0.34 HUW76_02270 DNA repair protein RadA 0.25 HUW76_08055 DNA repair protein RecN 0.89 14
Bifidobacterium breve UCC2003 0.34 BBR_RS18740 DNA repair protein RadA 0.17 BBR_RS14030 DNA repair protein RecN 0.44 2
Mycobacterium tuberculosis H37Rv 0.33 Rv3585 DNA repair protein RadA (DNA repair protein SMS) 0.21 Rv1696 Probable DNA repair protein RecN (recombination protein N) low > 58

Not shown: 2 genomes with orthologs for HP15_487 only; 0 genomes with orthologs for HP15_3084 only