Conservation of cofitness between Psest_3384 and Psest_2589 in Pseudomonas stutzeri RCH2

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3384 glutamate 5-kinase 1.0 Psest_2589 3-isopropylmalate dehydrogenase 0.79 18
Pseudomonas fluorescens SBW25 0.83 PFLU_RS25360 glutamate 5-kinase 0.87 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.57 17
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS25360 glutamate 5-kinase 0.87 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.53 22
Pseudomonas simiae WCS417 0.83 PS417_23545 gamma-glutamyl kinase 0.87 PS417_18585 3-isopropylmalate dehydrogenase 0.66 14
Pseudomonas sp. S08-1 0.82 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA 0.91 OH686_04470 3-isopropylmalate dehydrogenase 0.67 43
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.88 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Pseudomonas putida KT2440 0.80 PP_0691 Glutamate 5-kinase 0.87 PP_1988 3-isopropylmalate dehydrogenase 0.40 18
Pseudomonas sp. RS175 0.79 PFR28_03769 Glutamate 5-kinase 0.87 PFR28_02821 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_15815 gamma-glutamyl kinase 0.88 AO356_21415 3-isopropylmalate dehydrogenase 0.66 28
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.88 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 103
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_14115 gamma-glutamyl kinase 0.88 AO353_20635 3-isopropylmalate dehydrogenase 0.77 12
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_0704 glutamate 5-kinase 0.88 Psyr_1985 3-isopropylmalate dehydrogenase 0.87 18
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_0704 glutamate 5-kinase 0.88 Psyr_1985 3-isopropylmalate dehydrogenase 0.87 11
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.89 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.93 8
Marinobacter adhaerens HP15 0.62 HP15_508 gamma-glutamyl kinase 0.69 HP15_1832 3-isopropylmalate dehydrogenase — —
Dechlorosoma suillum PS 0.62 Dsui_0166 glutamate 5-kinase 0.67 Dsui_3198 3-isopropylmalate dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS27270 glutamate 5-kinase 0.62 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.78 61
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_06264 glutamate 5-kinase 0.62 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.58 15
Paraburkholderia graminis OAS925 0.61 ABIE53_003588 glutamate 5-kinase 0.62 ABIE53_004804 3-isopropylmalate dehydrogenase 0.78 6
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS17110 glutamate 5-kinase 0.62 BPHYT_RS33900 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum UW163 0.60 UW163_RS07480 glutamate 5-kinase 0.62 UW163_RS11115 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS06145 glutamate 5-kinase 0.62 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.59 35
Castellaniella sp019104865 MT123 0.60 ABCV34_RS10800 glutamate 5-kinase 0.62 ABCV34_RS04280 3-isopropylmalate dehydrogenase 0.49 6
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS17940 gamma-glutamyl kinase 0.62 RR42_RS14385 3-isopropylmalate dehydrogenase low > 128
Ralstonia solanacearum PSI07 0.59 RPSI07_RS11095 glutamate 5-kinase 0.62 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.66 15
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS01810 glutamate 5-kinase 0.63 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.87 3
Ralstonia solanacearum GMI1000 0.59 RS_RS14095 glutamate 5-kinase 0.62 RS_RS09990 3-isopropylmalate dehydrogenase 0.55 1
Variovorax sp. OAS795 0.58 ABID97_RS23400 glutamate 5-kinase 0.63 ABID97_RS08455 3-isopropylmalate dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS01815 gamma-glutamyl kinase 0.63 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.87 5
Variovorax sp. SCN45 0.56 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.63 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 127
Acidovorax sp. GW101-3H11 0.55 Ac3H11_4771 Glutamate 5-kinase (EC 2.7.2.11) 0.63 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.83 17
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.63 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 90
Acinetobacter radioresistens SK82 0.52 MPMX26_02135 Glutamate 5-kinase 0.70 MPMX26_00348 3-isopropylmalate dehydrogenase 0.75 31
Rhizobium sp. OAE497 0.43 ABIE40_RS18920 glutamate 5-kinase 0.57 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.90 24
Shewanella loihica PV-4 0.41 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.51 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.99 5
Sinorhizobium meliloti 1021 0.41 SMc03776 gamma-glutamyl kinase 0.57 SMc04405 3-isopropylmalate dehydrogenase 0.89 21
Agrobacterium fabrum C58 0.41 Atu2780 gamma-glutamyl kinase 0.56 Atu2791 3-isopropylmalate dehydrogenase — —
Shewanella amazonensis SB2B 0.40 Sama_2516 gamma-glutamyl kinase (RefSeq) 0.51 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.93 23
Azospirillum sp. SherDot2 0.40 MPMX19_01933 Glutamate 5-kinase 0.56 MPMX19_00607 3-isopropylmalate dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.40 AMB_RS20630 glutamate 5-kinase 0.55 AMB_RS20570 3-isopropylmalate dehydrogenase — —
Azospirillum brasilense Sp245 0.40 AZOBR_RS04095 glutamate 5-kinase 0.53 AZOBR_RS14130 3-isopropylmalate dehydrogenase — —
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_2197 proB gamma-glutamyl kinase 0.56 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.39 TX73_000850 glutamate 5-kinase 0.51 TX73_001175 3-isopropylmalate dehydrogenase — —
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_1377 gamma-glutamyl kinase (RefSeq) 0.61 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.94 17
Escherichia coli BL21 0.38 ECD_00239 gamma-glutamate kinase 0.51 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent low > 60
Escherichia coli Nissle 1917 0.38 ECOLIN_RS01825 glutamate 5-kinase 0.52 ECOLIN_RS00395 3-isopropylmalate dehydrogenase low > 52
Escherichia coli ECRC62 0.38 BNILDI_00245 proB Glutamate 5-kinase 0.51 BNILDI_08545 leuA 2-isopropylmalate synthase — —
Escherichia coli BW25113 0.38 b0242 proB gamma-glutamyl kinase (NCBI) 0.51 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.95 7
Escherichia coli ECOR27 0.38 NOLOHH_02050 proB Glutamate 5-kinase 0.51 NOLOHH_03065 leuA 2-isopropylmalate synthase low > 57
Escherichia coli ECRC101 0.38 MCAODC_00195 proB Glutamate 5-kinase 0.52 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECOR38 0.38 HEPCGN_07780 proB Glutamate 5-kinase 0.52 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase low > 85
Escherichia coli ECRC99 0.38 KEDOAH_18480 proB Glutamate 5-kinase 0.52 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC101 0.38 OKFHMN_09675 proB Glutamate 5-kinase 0.52 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase — —
Escherichia fergusonii Becca 0.38 EFB2_03778 Glutamate 5-kinase 0.52 EFB2_03972 3-isopropylmalate dehydrogenase low > 86
Escherichia coli ECRC102 0.38 NIAGMN_07535 proB Glutamate 5-kinase 0.52 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC98 0.38 JDDGAC_13300 proB Glutamate 5-kinase 0.52 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_03398 Glutamate 5-kinase 0.51 OHPLBJKB_03584 3-isopropylmalate dehydrogenase low > 73
Pantoea sp. MT58 0.38 IAI47_15120 glutamate 5-kinase 0.49 IAI47_16005 3-isopropylmalate dehydrogenase 0.91 20
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.52 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 78
Enterobacter sp. TBS_079 0.38 MPMX20_00927 Glutamate 5-kinase 0.53 MPMX20_00768 3-isopropylmalate dehydrogenase 0.89 36
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2651 glutamate 5-kinase 0.53 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.83 24
Bosea sp. OAE506 0.37 ABIE41_RS07585 glutamate 5-kinase 0.52 ABIE41_RS11860 3-isopropylmalate dehydrogenase — —
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU0930 proB glutamate 5-kinase (TIGR) 0.56 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.87 12
Klebsiella michiganensis M5al 0.37 BWI76_RS05840 glutamate 5-kinase 0.53 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.88 20
Shewanella oneidensis MR-1 0.37 SO1121 proB glutamate 5-kinase (NCBI ptt file) 0.51 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.98 11
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_00316 glutamate 5-kinase 0.50 CCNA_00193 3-isopropylmalate dehydrogenase low > 67
Caulobacter crescentus NA1000 0.37 CCNA_00316 glutamate 5-kinase 0.50 CCNA_00193 3-isopropylmalate dehydrogenase 0.90 27
Rhodospirillum rubrum S1H 0.37 Rru_A1239 Glutamate 5-kinase, ProB-related (NCBI) 0.56 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.80 4
Rahnella sp. WP5 0.37 EX31_RS20980 glutamate 5-kinase 0.51 EX31_RS03685 3-isopropylmalate dehydrogenase 0.98 6
Shewanella sp. ANA-3 0.37 Shewana3_0954 gamma-glutamyl kinase (RefSeq) 0.51 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.94 21
Erwinia tracheiphila SCR3 0.37 LU632_RS01185 proB glutamate 5-kinase 0.48 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase low > 74
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS02375 glutamate 5-kinase 0.44 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.85 4
Rhodanobacter denitrificans MT42 0.36 LRK55_RS02130 glutamate 5-kinase 0.44 LRK55_RS09965 3-isopropylmalate dehydrogenase low > 63
Serratia liquefaciens MT49 0.36 IAI46_04430 glutamate 5-kinase 0.52 IAI46_03350 3-isopropylmalate dehydrogenase low > 86
Phaeobacter inhibens DSM 17395 0.36 PGA1_c15510 glutamate 5-kinase ProB 0.59 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.82 6
Dinoroseobacter shibae DFL-12 0.36 Dshi_1467 glutamate 5-kinase (RefSeq) 0.57 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_11575 glutamate 5-kinase 0.51 CSW01_12600 3-isopropylmalate dehydrogenase low > 62
Pectobacterium carotovorum WPP14 0.35 HER17_RS04700 glutamate 5-kinase 0.51 HER17_RS03080 3-isopropylmalate dehydrogenase 0.90 33
Dickeya dadantii 3937 0.34 DDA3937_RS16535 glutamate 5-kinase 0.51 DDA3937_RS18120 3-isopropylmalate dehydrogenase low > 74
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_09420 proB glutamate 5-kinase 0.44 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase low > 52
Dickeya dianthicola ME23 0.34 DZA65_RS17695 glutamate 5-kinase 0.51 DZA65_RS19205 3-isopropylmalate dehydrogenase low > 75
Dickeya dianthicola 67-19 0.34 HGI48_RS16605 glutamate 5-kinase 0.51 HGI48_RS18060 3-isopropylmalate dehydrogenase low > 71
Bifidobacterium breve UCC2003 0.32 BBR_RS19445 glutamate 5-kinase 0.26 BBR_RS12870 3-isopropylmalate dehydrogenase low > 34
Alteromonas macleodii MIT1002 0.32 MIT1002_04056 Glutamate 5-kinase 0.50 MIT1002_00948 3-isopropylmalate dehydrogenase low > 70
Mycobacterium tuberculosis H37Rv 0.32 Rv2439c Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK) 0.28 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS16125 glutamate 5-kinase 0.45 A4249_RS09995 3-isopropylmalate dehydrogenase 0.99 8
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS08685 glutamate 5-kinase 0.42 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.83 50
Lysobacter sp. OAE881 0.31 ABIE51_RS13370 glutamate 5-kinase 0.48 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.85 5
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.83 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.55 57
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.55 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.89 28
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.43 Echvi_2062 3-isopropylmalate dehydrogenase — —
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS20855 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.49 CA265_RS15850 3-isopropylmalate dehydrogenase 0.91 29
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS22170 glutamate 5-kinase 0.49 ABZR88_RS11605 3-isopropylmalate dehydrogenase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_07725 glutamate 5-kinase 0.44 CA264_09445 3-isopropylmalate dehydrogenase low > 74
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS08650 glutamate 5-kinase 0.42 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.81 39
Bacteroides ovatus ATCC 8483 0.25 BACOVA_03537 glutamate 5-kinase 0.41 BACOVA_04600 3-isopropylmalate dehydrogenase 0.95 8
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS10650 glutamate 5-kinase 0.44 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.93 46
Phocaeicola dorei CL03T12C01 0.25 ABI39_RS02880 glutamate 5-kinase 0.42 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.83 26
Bacteroides thetaiotaomicron VPI-5482 0.25 BT3719 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.42 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.82 38
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS03325 glutamate 5-kinase 0.43 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.91 30

Not shown: 0 genomes with orthologs for Psest_3384 only; 3 genomes with orthologs for Psest_2589 only