| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Bifidobacterium breve UCC2003 | 1.0 | BBR_RS12310 | | signal recognition particle protein | 1.0 | BBR_RS10990 | | recombination protein RecR | 0.42 | 11 |
| Mycobacterium tuberculosis H37Rv | 0.50 | Rv2916c | | Probable signal recognition particle protein Ffh (fifty-four homolog) (SRP protein) | 0.58 | Rv3715c | | Probable recombination protein RecR | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.40 | ABZR88_RS21150 | | signal recognition particle protein | 0.44 | ABZR88_RS10695 | | recombination mediator RecR | — | — |
| Bacteroides stercoris CC31F | 0.39 | HMPREF1181_RS11300 | | signal recognition particle protein | 0.47 | HMPREF1181_RS16455 | | recombination protein RecR | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.39 | BT1601 | | putative signal recognition protein (NCBI ptt file) | 0.47 | BT1081 | | recombination protein recR (NCBI ptt file) | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.39 | CA264_07930 | | signal recognition particle protein | 0.48 | CA264_01105 | | recombination protein RecR | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.38 | HMPREF1058_RS15070 | | signal recognition particle protein | 0.47 | HMPREF1058_RS18560 | | recombination protein RecR | — | — |
| Phocaeicola dorei CL03T12C01 | 0.38 | ABI39_RS10865 | | signal recognition particle protein | 0.47 | ABI39_RS14870 | | recombination protein RecR | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.38 | DvMF_2888 | | signal recognition particle protein (RefSeq) | 0.34 | DvMF_2271 | | recombination protein RecR (RefSeq) | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.38 | CA265_RS20420 | | signal recognition particle protein | 0.46 | CA265_RS04980 | | recombination protein RecR | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.38 | Echvi_3834 | | signal recognition particle protein | 0.47 | Echvi_1987 | | recombination protein RecR | — | — |
| Fusobacterium nucleatum SB010 | 0.38 | HUW76_08185 | | signal recognition particle protein | 0.53 | HUW76_08785 | | recombination protein RecR | — | — |
| Shewanella loihica PV-4 | 0.37 | Shew_1062 | | signal recognition particle protein (RefSeq) | 0.38 | Shew_2233 | | recombination protein RecR (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.37 | Sama_0888 | | signal recognition particle protein (RefSeq) | 0.37 | Sama_1312 | recR | recombination protein RecR (RefSeq) | — | — |
| Parabacteroides merdae CL09T00C40 | 0.37 | HMPREF1078_RS14695 | | signal recognition particle protein | 0.45 | HMPREF1078_RS07615 | | recombination mediator RecR | — | — |
| Pectobacterium carotovorum WPP14 | 0.37 | HER17_RS05110 | | signal recognition particle protein | 0.38 | HER17_RS15695 | | recombination mediator RecR | — | — |
| Dechlorosoma suillum PS | 0.36 | Dsui_1322 | | signal recognition particle protein | 0.42 | Dsui_1811 | | recombination protein RecR | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.36 | DVU0840 | ffh | signal recognition particle protein (TIGR) | 0.35 | DVU3200 | recR | recombination protein RecR (TIGR) | — | — |
| Kangiella aquimarina DSM 16071 | 0.36 | B158DRAFT_2260 | | signal recognition particle subunit FFH/SRP54 (srp54) | 0.38 | B158DRAFT_2480 | | DNA replication and repair protein RecR | — | — |
| Enterobacter asburiae PDN3 | 0.36 | EX28DRAFT_2713 | | signal recognition particle subunit FFH/SRP54 (srp54) | 0.40 | EX28DRAFT_2485 | | DNA replication and repair protein RecR | — | — |
| Dickeya dadantii 3937 | 0.36 | DDA3937_RS16180 | | signal recognition particle protein | 0.39 | DDA3937_RS05790 | | recombination protein RecR | — | — |
| Escherichia coli ECRC62 | 0.36 | BNILDI_11650 | ffh | signal recognition particle protein | 0.38 | BNILDI_22505 | recR | recombination mediator RecR | — | — |
| Escherichia coli ECRC102 | 0.36 | NIAGMN_18940 | ffh | signal recognition particle protein | 0.38 | NIAGMN_06210 | recR | recombination mediator RecR | — | — |
| Escherichia coli ECOR27 | 0.36 | NOLOHH_12845 | ffh | signal recognition particle protein | 0.38 | NOLOHH_01085 | recR | recombination mediator RecR | — | — |
| Escherichia coli BL21 | 0.36 | ECD_02499 | | Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) | 0.38 | ECD_00423 | | gap repair protein | — | — |
| Escherichia coli ECRC99 | 0.36 | KEDOAH_07050 | ffh | signal recognition particle protein | 0.38 | KEDOAH_19810 | recR | recombination mediator RecR | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.36 | OHPLBJKB_01096 | | Signal recognition particle protein | 0.38 | OHPLBJKB_03202 | | Recombination protein RecR | — | — |
| Escherichia coli ECRC100 | 0.36 | OKFHMN_21170 | ffh | signal recognition particle protein | 0.38 | OKFHMN_08155 | recR | recombination mediator RecR | — | — |
| Escherichia coli ECRC98 | 0.36 | JDDGAC_24835 | ffh | signal recognition particle protein | 0.38 | JDDGAC_11805 | recR | recombination mediator RecR | — | — |
| Escherichia coli ECRC101 | 0.36 | MCAODC_11700 | ffh | signal recognition particle protein | 0.38 | MCAODC_27380 | recR | recombination mediator RecR | — | — |
| Klebsiella michiganensis M5al | 0.36 | BWI76_RS21530 | | signal recognition particle protein | 0.39 | BWI76_RS06830 | | recombination protein RecR | — | — |
| Escherichia coli BW25113 | 0.36 | b2610 | ffh | Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) (NCBI) | 0.38 | b0472 | recR | recombination protein RecR (NCBI) | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF4168 | | Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) | 0.39 | GFF4390 | | Recombination protein RecR | — | — |
| Escherichia coli Nissle 1917 | 0.36 | ECOLIN_RS14750 | | signal recognition particle protein | 0.38 | ECOLIN_RS02805 | | recombination mediator RecR | — | — |
| Escherichia fergusonii Becca | 0.36 | EFB2_01282 | | Signal recognition particle protein | 0.38 | EFB2_03586 | | Recombination protein RecR | — | — |
| Dickeya dianthicola 67-19 | 0.36 | HGI48_RS16290 | | signal recognition particle protein | 0.39 | HGI48_RS05840 | | recombination protein RecR | — | — |
| Escherichia coli ECOR38 | 0.36 | HEPCGN_20290 | ffh | signal recognition particle protein | 0.38 | HEPCGN_06770 | recR | recombination mediator RecR | — | — |
| Pseudomonas sp. S08-1 | 0.36 | OH686_17720 | | signal recognition particle protein | 0.40 | OH686_02385 | | recombination protein RecR | — | — |
| Acinetobacter radioresistens SK82 | 0.36 | MPMX26_02468 | | Signal recognition particle protein | 0.41 | MPMX26_01643 | | Recombination protein RecR | — | — |
| Enterobacter sp. TBS_079 | 0.36 | MPMX20_03480 | | Signal recognition particle protein | 0.40 | MPMX20_01074 | | Recombination protein RecR | — | — |
| Dickeya dianthicola ME23 | 0.36 | DZA65_RS17385 | | signal recognition particle protein | 0.39 | DZA65_RS06165 | | recombination protein RecR | — | — |
| Erwinia tracheiphila SCR3 | 0.35 | LU632_RS15670 | ffh | signal recognition particle protein | 0.39 | LU632_RS18105 | recR | recombination mediator RecR | — | — |
| Alteromonas macleodii MIT1002 | 0.35 | MIT1002_01296 | | p48 | 0.38 | MIT1002_02649 | | Recombination protein RecR | — | — |
| Shewanella oneidensis MR-1 | 0.35 | SO1356 | ffh | signal recognition particle protein Ffh (NCBI ptt file) | 0.36 | SO2015 | recR | recombination protein RecR (NCBI ptt file) | — | — |
| Serratia liquefaciens MT49 | 0.35 | IAI46_03915 | | signal recognition particle protein | 0.40 | IAI46_05240 | | recombination protein RecR | — | — |
| Pseudomonas stutzeri RCH2 | 0.35 | Psest_3134 | | signal recognition particle protein | 0.41 | Psest_2545 | | recombination protein RecR | — | — |
| Shewanella sp. ANA-3 | 0.35 | Shewana3_3018 | | signal recognition particle protein (RefSeq) | 0.36 | Shewana3_2444 | recR | recombination protein RecR (RefSeq) | — | — |
| Pseudomonas sp. RS175 | 0.35 | PFR28_00326 | | Signal recognition particle protein | 0.40 | PFR28_01077 | | Recombination protein RecR | — | — |
| Pantoea sp. MT58 | 0.35 | IAI47_04370 | | signal recognition particle protein | 0.40 | IAI47_14465 | | recombination protein RecR | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.35 | QEN71_RS27240 | | signal recognition particle protein | 0.41 | QEN71_RS22285 | | recombination mediator RecR | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.35 | AO356_06410 | | RNA-binding protein | 0.40 | AO356_02495 | | recombination protein RecR | — | — |
| Magnetospirillum magneticum AMB-1 | 0.35 | AMB_RS20535 | | signal recognition particle protein | 0.35 | AMB_RS20755 | | recombination protein RecR | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.35 | Pf1N1B4_874 | | Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) | 0.39 | Pf1N1B4_3864 | | Recombination protein RecR | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.35 | PfGW456L13_1715 | | Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) | 0.38 | PfGW456L13_4074 | | Recombination protein RecR | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.35 | Pf6N2E2_3150 | | Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) | 0.40 | Pf6N2E2_2325 | | Recombination protein RecR | — | — |
| Rahnella sp. WP5 | 0.35 | EX31_RS07730 | | signal recognition particle protein | 0.38 | EX31_RS22525 | | recombination protein RecR | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.34 | AO353_04390 | | RNA-binding protein | 0.39 | AO353_00675 | | recombination protein RecR | — | — |
| Pseudomonas simiae WCS417 | 0.34 | PS417_22925 | | RNA-binding protein | 0.40 | PS417_20800 | | recombination protein RecR | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.34 | PFLU_RS24585 | | signal recognition particle protein | 0.40 | PFLU_RS22415 | | recombination protein RecR | — | — |
| Pseudomonas fluorescens SBW25 | 0.34 | PFLU_RS24585 | | signal recognition particle protein | 0.40 | PFLU_RS22415 | | recombination protein RecR | — | — |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS17080 | | signal recognition particle protein | 0.40 | BPHYT_RS09070 | | recombination protein RecR | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_06270 | | signal recognition particle subunit FFH/SRP54 (srp54) | 0.41 | H281DRAFT_00834 | | DNA replication and repair protein RecR | — | — |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_003582 | | signal recognition particle subunit SRP54 | 0.41 | ABIE53_002048 | | recombination protein RecR | — | — |
| Pseudomonas putida KT2440 | 0.34 | PP_1461 | | GTPase component of the signal recognition particle (SRP) | 0.39 | PP_4267 | | Recombination protein RecR | — | — |
| Herbaspirillum seropedicae SmR1 | 0.34 | HSERO_RS01850 | | signal recognition particle protein | 0.41 | HSERO_RS18355 | | recombinase RecR | — | — |
| Marinobacter adhaerens HP15 | 0.34 | HP15_757 | | signal recognition particle protein | 0.41 | HP15_1883 | | recombination protein RecR | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.34 | Psyr_1281 | | signal recognition particle subunit FFH/SRP54 (srp54) | 0.39 | Psyr_3396 | | DNA replication and repair protein RecR | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.34 | Psyr_1281 | | signal recognition particle subunit FFH/SRP54 (srp54) | 0.39 | Psyr_3396 | | DNA replication and repair protein RecR | — | — |
| Castellaniella sp019104865 MT123 | 0.34 | ABCV34_RS09010 | | signal recognition particle protein | 0.40 | ABCV34_RS15480 | | recombination mediator RecR | — | — |
| Rhodanobacter sp. FW510-T8 | 0.34 | OKGIIK_09570 | ffh | signal recognition particle protein | 0.42 | OKGIIK_05655 | recR | recombination mediator RecR | — | — |
| Ralstonia solanacearum GMI1000 | 0.34 | RS_RS14055 | | signal recognition particle protein | 0.40 | RS_RS05980 | | recombination protein RecR | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.34 | RR42_RS17890 | | signal recognition particle protein | 0.40 | RR42_RS13270 | | recombination protein RecR | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.34 | CSW01_02990 | | signal recognition particle protein | 0.38 | CSW01_05375 | | recombination protein RecR | — | — |
| Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS03510 | | signal recognition particle protein | 0.43 | AZOBR_RS03880 | | recombinase RecR | — | — |
| Lysobacter sp. OAE881 | 0.34 | ABIE51_RS07735 | | signal recognition particle protein | 0.40 | ABIE51_RS14010 | | recombination mediator RecR | — | — |
| Ralstonia solanacearum PSI07 | 0.34 | RPSI07_RS11135 | | signal recognition particle protein | 0.40 | RPSI07_RS18205 | | recombination protein RecR | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.34 | ABZR86_RS08830 | | signal recognition particle protein | 0.41 | ABZR86_RS06235 | | recombination mediator RecR | — | — |
| Ralstonia solanacearum UW163 | 0.33 | UW163_RS07520 | | signal recognition particle protein | 0.41 | UW163_RS12640 | | recombination protein RecR | — | — |
| Ralstonia sp. UNC404CL21Col | 0.33 | ABZR87_RS01770 | | signal recognition particle protein | 0.42 | ABZR87_RS10810 | | recombination mediator RecR | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.33 | RALBFv3_RS06105 | | signal recognition particle protein | 0.41 | RALBFv3_RS15170 | | recombination protein RecR | — | — |
| Azospirillum sp. SherDot2 | 0.33 | MPMX19_00322 | | Signal recognition particle protein | 0.43 | MPMX19_02195 | | Recombination protein RecR | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.33 | Xcc-8004.3774.1 | | Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) | 0.38 | Xcc-8004.4012.1 | | Recombination protein RecR | — | — |
| Acidovorax sp. GW101-3H11 | 0.33 | Ac3H11_4015 | | Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) | 0.35 | Ac3H11_473 | | Recombination protein RecR | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.33 | LRK54_RS02515 | | signal recognition particle protein | 0.41 | LRK54_RS01250 | | recombination mediator RecR | — | — |
| Bosea sp. OAE506 | 0.33 | ABIE41_RS11730 | | signal recognition particle protein | 0.37 | ABIE41_RS04035 | | recombination mediator RecR | — | — |
| Rhodanobacter denitrificans MT42 | 0.33 | LRK55_RS02270 | | signal recognition particle protein | 0.41 | LRK55_RS01020 | | recombination mediator RecR | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.33 | Ga0059261_4158 | | signal recognition particle subunit FFH/SRP54 (srp54) | 0.40 | Ga0059261_0645 | | DNA replication and repair protein RecR | — | — |
| Synechococcus elongatus PCC 7942 | 0.32 | Synpcc7942_1771 | ffh | signal recognition particle subunit FFH/SRP54 (srp54) | 0.49 | Synpcc7942_1369 | recR | recombination protein RecR | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF599 | | Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) | 0.41 | GFF4253 | | Recombination protein RecR | — | — |
| Dinoroseobacter shibae DFL-12 | 0.32 | Dshi_0353 | | signal recognition particle protein (RefSeq) | 0.36 | Dshi_0648 | | recombination protein RecR (RefSeq) | — | — |
| Rhodospirillum rubrum S1H | 0.32 | Rru_A1184 | | Signal recognition particle protein (NCBI) | 0.40 | Rru_A3471 | | RecR protein (NCBI) | — | — |
| Variovorax sp. SCN45 | 0.32 | GFF4428 | | Signal recognition particle protein Ffh | 0.41 | GFF1110 | | Recombination protein RecR | — | — |
| Variovorax sp. OAS795 | 0.32 | ABID97_RS06435 | | signal recognition particle protein | 0.40 | ABID97_RS14700 | | recombination mediator RecR | — | — |
| Caulobacter crescentus NA1000 | 0.31 | CCNA_03768 | | signal recognition particle GTPase, SRP | 0.39 | CCNA_00270 | | Recombination protein recR | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.31 | CCNA_03768 | | signal recognition particle GTPase, SRP | 0.39 | CCNA_00270 | | Recombination protein recR | low | > 67 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.31 | A4249_RS14850 | | signal recognition particle protein | 0.34 | A4249_RS15115 | | recombination mediator RecR | — | — |
| Rhodopseudomonas palustris CGA009 | 0.31 | TX73_001270 | | signal recognition particle protein | 0.42 | TX73_003195 | | recombination mediator RecR | — | — |
| Phaeobacter inhibens DSM 17395 | 0.30 | PGA1_c00630 | | signal recognition particle protein Ffh | 0.37 | PGA1_c30290 | | recombination protein RecR | — | — |
| Agrobacterium fabrum C58 | 0.30 | Atu2697 | | signal recognition particle protein | 0.43 | Atu0093 | | Recombination protein | — | — |
| Sinorhizobium meliloti 1021 | 0.29 | SMc03857 | | signal recognition particle protein | 0.42 | SMc02908 | | recombination protein RecR | — | — |
| Rhizobium sp. OAE497 | 0.28 | ABIE40_RS18335 | | signal recognition particle protein | 0.39 | ABIE40_RS00300 | | recombination mediator RecR | — | — |
Not shown: 3 genomes with orthologs for BBR_RS12310 only; 0 genomes with orthologs for BBR_RS10990 only