Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Shewanella amazonensis SB2B | 1.0 | Sama_0337 | | isopropylmalate isomerase large subunit (RefSeq) | 1.0 | Sama_1943 | | histidinol-phosphate aminotransferase (RefSeq) | 0.95 | 15 |
Shewanella sp. ANA-3 | 0.86 | Shewana3_3759 | | isopropylmalate isomerase large subunit (RefSeq) | 0.54 | Shewana3_1852 | | histidinol phosphate aminotransferase (RefSeq) | 0.96 | 7 |
Shewanella loihica PV-4 | 0.86 | Shew_3470 | | isopropylmalate isomerase large subunit (RefSeq) | 0.56 | Shew_2199 | | histidinol-phosphate aminotransferase (RefSeq) | 0.97 | 30 |
Shewanella oneidensis MR-1 | 0.85 | SO4234 | leuC | 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) | 0.55 | SO2072 | hisC | histidinol-phosphate aminotransferase (NCBI ptt file) | 0.98 | 5 |
Escherichia fergusonii Becca | 0.73 | EFB2_03973 | | 3-isopropylmalate dehydratase large subunit | 0.37 | EFB2_01835 | | Histidinol-phosphate aminotransferase | low | > 86 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.73 | OHPLBJKB_03585 | | 3-isopropylmalate dehydratase large subunit | 0.37 | OHPLBJKB_01679 | | Histidinol-phosphate aminotransferase | low | > 73 |
Escherichia coli ECOR27 | 0.73 | NOLOHH_03070 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.37 | NOLOHH_15825 | hisC | histidinol-phosphate transaminase | 0.94 | 25 |
Escherichia coli ECRC62 | 0.73 | BNILDI_08540 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.36 | BNILDI_14735 | hisC | histidinol-phosphate transaminase | 0.98 | 19 |
Escherichia coli Nissle 1917 | 0.73 | ECOLIN_RS00390 | | 3-isopropylmalate dehydratase large subunit | 0.37 | ECOLIN_RS11950 | | histidinol-phosphate transaminase | — | — |
Escherichia coli BW25113 | 0.73 | b0072 | leuC | isopropylmalate isomerase large subunit (NCBI) | 0.37 | b2021 | hisC | histidinol-phosphate aminotransferase (NCBI) | 0.95 | 12 |
Escherichia coli ECOR38 | 0.73 | HEPCGN_08705 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.37 | HEPCGN_03215 | hisC | histidinol-phosphate transaminase | 0.98 | 12 |
Escherichia coli BL21 | 0.73 | ECD_00074 | | 3-isopropylmalate dehydratase large subunit | 0.37 | ECD_01923 | | histidinol-phosphate aminotransferase | 0.91 | 24 |
Escherichia coli ECRC99 | 0.72 | KEDOAH_17430 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.37 | KEDOAH_03640 | hisC | histidinol-phosphate transaminase | — | — |
Escherichia coli ECRC100 | 0.72 | OKFHMN_10725 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.37 | OKFHMN_24510 | hisC | histidinol-phosphate transaminase | 0.92 | 56 |
Escherichia coli ECRC102 | 0.72 | NIAGMN_08575 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.37 | NIAGMN_22455 | hisC | histidinol-phosphate transaminase | — | — |
Escherichia coli ECRC101 | 0.72 | MCAODC_01240 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.37 | MCAODC_20430 | hisC | histidinol-phosphate transaminase | 0.97 | 9 |
Escherichia coli ECRC98 | 0.72 | JDDGAC_14320 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.37 | JDDGAC_28620 | hisC | histidinol-phosphate transaminase | 0.94 | 18 |
Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_3668 | | 3-isopropylmalate dehydratase, large subunit | 0.36 | EX28DRAFT_0538 | | histidinol-phosphate aminotransferase | 0.92 | 11 |
Klebsiella michiganensis M5al | 0.72 | BWI76_RS04670 | | 3-isopropylmalate dehydratase large subunit | 0.36 | BWI76_RS18930 | | histidinol-phosphate transaminase | 0.87 | 35 |
Pantoea sp. MT58 | 0.72 | IAI47_16010 | | 3-isopropylmalate dehydratase large subunit | 0.38 | IAI47_07085 | | histidinol-phosphate transaminase | 0.98 | 7 |
Enterobacter sp. TBS_079 | 0.72 | MPMX20_00767 | | 3-isopropylmalate dehydratase large subunit 1 | 0.36 | MPMX20_03003 | | Histidinol-phosphate aminotransferase | 0.93 | 16 |
Rahnella sp. WP5 | 0.72 | EX31_RS03690 | | 3-isopropylmalate dehydratase large subunit | 0.35 | EX31_RS11445 | | histidinol-phosphate transaminase | 0.98 | 14 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.72 | GFF166 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.37 | GFF3911 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 78 |
Dickeya dadantii 3937 | 0.71 | DDA3937_RS18125 | | 3-isopropylmalate dehydratase large subunit | 0.36 | DDA3937_RS09730 | | histidinol-phosphate transaminase | 0.71 | 32 |
Serratia liquefaciens MT49 | 0.71 | IAI46_03345 | | 3-isopropylmalate dehydratase large subunit | 0.36 | IAI46_08205 | | histidinol-phosphate transaminase | low | > 86 |
Dickeya dianthicola ME23 | 0.70 | DZA65_RS19210 | | 3-isopropylmalate dehydratase large subunit | 0.37 | DZA65_RS10050 | | histidinol-phosphate transaminase | low | > 75 |
Vibrio cholerae E7946 ATCC 55056 | 0.70 | CSW01_12605 | | 3-isopropylmalate dehydratase large subunit | 0.40 | CSW01_05755 | | histidinol-phosphate transaminase | low | > 62 |
Dickeya dianthicola 67-19 | 0.70 | HGI48_RS18065 | | 3-isopropylmalate dehydratase large subunit | 0.37 | HGI48_RS09740 | | histidinol-phosphate transaminase | low | > 71 |
Pectobacterium carotovorum WPP14 | 0.70 | HER17_RS03075 | | 3-isopropylmalate dehydratase large subunit | 0.38 | HER17_RS12235 | | histidinol-phosphate transaminase | 0.97 | 17 |
Erwinia tracheiphila SCR3 | 0.68 | LU632_RS02870 | leuC | 3-isopropylmalate dehydratase large subunit | 0.36 | LU632_RS08940 | hisC | histidinol-phosphate transaminase | 0.79 | 25 |
Alteromonas macleodii MIT1002 | 0.66 | MIT1002_00947 | | 3-isopropylmalate dehydratase large subunit | 0.38 | MIT1002_02634 | | Histidinol-phosphate aminotransferase | 0.96 | 40 |
Azospirillum sp. SherDot2 | 0.64 | MPMX19_01998 | | 3-isopropylmalate dehydratase large subunit | 0.16 | MPMX19_04389 | | Histidinol-phosphate aminotransferase | — | — |
Rhodospirillum rubrum S1H | 0.63 | Rru_A1189 | | 3-isopropylmalate dehydratase large subunit region (NCBI) | 0.17 | Rru_A3264 | | Histidinol-phosphate aminotransferase (NCBI) | 0.88 | 22 |
Azospirillum brasilense Sp245 | 0.62 | AZOBR_RS03545 | | isopropylmalate isomerase | 0.17 | AZOBR_RS20485 | | histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) | 0.89 | 11 |
Sinorhizobium meliloti 1021 | 0.61 | SMc03823 | | isopropylmalate isomerase large subunit | 0.17 | SMc03885 | | histidinol-phosphate aminotransferase | low | > 103 |
Rhodopseudomonas palustris CGA009 | 0.61 | TX73_001245 | | 3-isopropylmalate dehydratase large subunit | 0.17 | TX73_023035 | | histidinol-phosphate transaminase | — | — |
Castellaniella sp019104865 MT123 | 0.61 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | 0.18 | ABCV34_RS02645 | | histidinol-phosphate transaminase | 0.47 | 21 |
Magnetospirillum magneticum AMB-1 | 0.61 | AMB_RS20560 | | 3-isopropylmalate dehydratase large subunit | 0.16 | AMB_RS20110 | | histidinol-phosphate aminotransferase | — | — |
Agrobacterium fabrum C58 | 0.61 | Atu2709 | | 3-isopropylmalate dehydratase, large subunit | 0.13 | Atu3612 | | histidinol-phosphate aminotransferase | — | — |
Cupriavidus basilensis FW507-4G11 | 0.60 | RR42_RS14400 | | isopropylmalate isomerase | 0.17 | RR42_RS04465 | | aspartate aminotransferase | low | > 128 |
Rhizobium sp. OAE497 | 0.60 | ABIE40_RS18380 | | 3-isopropylmalate dehydratase large subunit | 0.15 | ABIE40_RS17595 | | histidinol-phosphate transaminase | 0.94 | 21 |
Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_15 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.18 | Pf1N1B4_1065 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 87 |
Xanthomonas campestris pv. campestris strain 8004 | 0.60 | Xcc-8004.1049.1 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.32 | Xcc-8004.2947.1 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | 0.90 | 13 |
Pseudomonas putida KT2440 | 0.60 | PP_1985 | | 3-isopropylmalate dehydratase large subunit | 0.16 | PP_0967 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.89 | 8 |
Pseudomonas syringae pv. syringae B728a | 0.60 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.18 | Psyr_4132 | | histidinol phosphate aminotransferase apoenzyme | 0.89 | 15 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.60 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.18 | Psyr_4132 | | histidinol phosphate aminotransferase apoenzyme | 0.89 | 18 |
Pseudomonas sp. RS175 | 0.60 | PFR28_02824 | | 3-isopropylmalate dehydratase large subunit | 0.18 | PFR28_00188 | | Histidinol-phosphate aminotransferase | 0.39 | 39 |
Pseudomonas stutzeri RCH2 | 0.59 | Psest_2591 | | 3-isopropylmalate dehydratase, large subunit | 0.16 | Psest_3297 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.81 | 21 |
Herbaspirillum seropedicae SmR1 | 0.59 | HSERO_RS16515 | | isopropylmalate isomerase | 0.17 | HSERO_RS23520 | | histidinol-phosphate aminotransferase | low | > 78 |
Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_21400 | | isopropylmalate isomerase | 0.18 | AO356_06960 | | histidinol-phosphate aminotransferase | 0.62 | 59 |
Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_20620 | | isopropylmalate isomerase | 0.17 | AO353_05105 | | histidinol-phosphate aminotransferase | 0.65 | 58 |
Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_3948 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.18 | PfGW456L13_4999 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | 0.67 | 70 |
Mycobacterium tuberculosis H37Rv | 0.59 | Rv2988c | | Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | 0.15 | Rv3772 | | Probable histidinol-phosphate aminotransferase HisC2 (imidazole acetol-phosphate transaminase) (imidazolylacetolphosphate aminotransferase) | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_63 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.18 | Pf6N2E2_3251 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.60 | 41 |
Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | 0.18 | ABZR87_RS09455 | | histidinol-phosphate transaminase | low | > 80 |
Ralstonia solanacearum GMI1000 | 0.59 | RS_RS10000 | | 3-isopropylmalate dehydratase large subunit | 0.18 | RS_RS04500 | | histidinol-phosphate aminotransferase | low | > 80 |
Pseudomonas simiae WCS417 | 0.59 | PS417_18600 | | isopropylmalate isomerase | 0.18 | PS417_04425 | | histidinol-phosphate aminotransferase | 0.40 | 88 |
Marinobacter adhaerens HP15 | 0.59 | HP15_1834 | | protein containing 3-isopropylmalate dehydratase, large subunit region domain | 0.20 | HP15_2427 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.89 | 12 |
Paraburkholderia sabiae LMG 24235 | 0.59 | QEN71_RS17605 | | 3-isopropylmalate dehydratase large subunit | 0.19 | QEN71_RS01680 | | histidinol-phosphate transaminase | low | > 153 |
Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS02620 | | 3-isopropylmalate dehydratase large subunit | 0.18 | RALBFv3_RS13765 | | histidinol-phosphate transaminase | low | > 76 |
Ralstonia solanacearum UW163 | 0.59 | UW163_RS11105 | | 3-isopropylmalate dehydratase large subunit | 0.18 | UW163_RS16045 | | histidinol-phosphate transaminase | — | — |
Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.18 | PFLU_RS04475 | | histidinol-phosphate transaminase | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.18 | PFLU_RS04475 | | histidinol-phosphate transaminase | low | > 109 |
Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_06075 | | 3-isopropylmalate dehydratase, large subunit | 0.18 | H281DRAFT_01942 | | histidinol-phosphate aminotransferase | low | > 103 |
Burkholderia phytofirmans PsJN | 0.59 | BPHYT_RS33915 | | isopropylmalate isomerase | 0.18 | BPHYT_RS02830 | | aspartate aminotransferase | low | > 109 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.59 | GFF3363 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.16 | GFF1493 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 90 |
Pseudomonas sp. S08-1 | 0.59 | OH686_04480 | | 3-isopropylmalate dehydratase large subunit | 0.18 | OH686_08465 | | histidinol-phosphate transaminase | 0.91 | 5 |
Acinetobacter radioresistens SK82 | 0.58 | MPMX26_00345 | | 3-isopropylmalate dehydratase large subunit | 0.18 | MPMX26_02586 | | Histidinol-phosphate aminotransferase | 0.92 | 18 |
Paraburkholderia graminis OAS925 | 0.58 | ABIE53_004801 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit | 0.18 | ABIE53_000704 | | histidinol-phosphate aminotransferase | low | > 113 |
Variovorax sp. OAS795 | 0.58 | ABID97_RS08465 | | 3-isopropylmalate dehydratase large subunit | 0.17 | ABID97_RS08770 | | histidinol-phosphate transaminase | — | — |
Variovorax sp. SCN45 | 0.58 | GFF3890 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.18 | GFF3955 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 127 |
Dechlorosoma suillum PS | 0.58 | Dsui_3201 | | 3-isopropylmalate dehydratase, large subunit | 0.17 | Dsui_1414 | | histidinol-phosphate aminotransferase | — | — |
Caulobacter crescentus NA1000 Δfur | 0.57 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.13 | CCNA_02306 | | histidinol-phosphate aminotransferase | low | > 67 |
Caulobacter crescentus NA1000 | 0.57 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.13 | CCNA_02306 | | histidinol-phosphate aminotransferase | 0.96 | 9 |
Dinoroseobacter shibae DFL-12 | 0.56 | Dshi_0085 | | 3-isopropylmalate dehydratase, large subunit (RefSeq) | 0.14 | Dshi_2946 | | histidinol-phosphate aminotransferase (RefSeq) | — | — |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.56 | CA264_09435 | | 3-isopropylmalate dehydratase large subunit | 0.26 | CA264_05035 | | histidinol-phosphate transaminase | low | > 74 |
Phaeobacter inhibens DSM 17395 | 0.56 | PGA1_c29780 | | 3-isopropylmalate dehydratase large subunit | 0.17 | PGA1_c25240 | | histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.55 | Ga0059261_4223 | | 3-isopropylmalate dehydratase, large subunit | 0.15 | Ga0059261_2299 | | histidinol-phosphate aminotransferase | 0.99 | 11 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.54 | ABZR88_RS11595 | | 3-isopropylmalate dehydratase large subunit | 0.25 | ABZR88_RS06875 | | histidinol-phosphate transaminase | — | — |
Pedobacter sp. GW460-11-11-14-LB5 | 0.54 | CA265_RS15830 | | 3-isopropylmalate dehydratase large subunit | 0.24 | CA265_RS03630 | | histidinol-phosphate transaminase | 0.91 | 35 |
Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS07375 | | 3-isopropylmalate dehydratase large subunit | 0.33 | LRK54_RS01600 | | histidinol-phosphate transaminase | low | > 59 |
Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS07105 | | 3-isopropylmalate dehydratase large subunit | 0.32 | LRK55_RS01380 | | histidinol-phosphate transaminase | low | > 63 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.51 | Echvi_2059 | | 3-isopropylmalate dehydratase, large subunit | 0.24 | Echvi_2458 | | histidinol-phosphate aminotransferase | 0.68 | 31 |
Lysobacter sp. OAE881 | 0.51 | ABIE51_RS17575 | | 3-isopropylmalate dehydratase large subunit | 0.29 | ABIE51_RS13320 | | histidinol-phosphate transaminase | 0.93 | 29 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.51 | A4249_RS10005 | | 3-isopropylmalate dehydratase large subunit | 0.18 | A4249_RS11450 | | histidinol-phosphate transaminase | low | > 48 |
Bacteroides ovatus ATCC 8483 | 0.51 | BACOVA_04603 | | 3-isopropylmalate dehydratase, large subunit | 0.22 | BACOVA_01233 | | histidinol-phosphate transaminase | 0.95 | 22 |
Dyella japonica UNC79MFTsu3.2 | 0.51 | ABZR86_RS15960 | | 3-isopropylmalate dehydratase large subunit | 0.29 | ABZR86_RS06725 | | histidinol-phosphate transaminase | 0.95 | 25 |
Bacteroides stercoris CC31F | 0.50 | HMPREF1181_RS14145 | | 3-isopropylmalate dehydratase large subunit | 0.22 | HMPREF1181_RS04855 | | histidinol-phosphate transaminase | 0.92 | 22 |
Bacteroides thetaiotaomicron VPI-5482 | 0.50 | BT1860 | | 3-isopropylmalate dehydratase large subunit (NCBI ptt file) | 0.22 | BT0202 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.88 | 20 |
Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_13585 | leuC | 3-isopropylmalate dehydratase large subunit | 0.34 | OKGIIK_04955 | hisC | histidinol-phosphate transaminase | low | > 52 |
Synechococcus elongatus PCC 7942 | 0.49 | Synpcc7942_1898 | leuC | isopropylmalate isomerase large subunit | 0.13 | Synpcc7942_1030 | hisC | histidinol-phosphate aminotransferase | — | — |
Parabacteroides merdae CL09T00C40 | 0.49 | HMPREF1078_RS16660 | | 3-isopropylmalate dehydratase large subunit | 0.26 | HMPREF1078_RS02445 | | histidinol-phosphate transaminase | 0.95 | 27 |
Phocaeicola vulgatus CL09T03C04 | 0.49 | HMPREF1058_RS14550 | | 3-isopropylmalate dehydratase large subunit | 0.23 | HMPREF1058_RS15880 | | histidinol-phosphate transaminase | 0.85 | 15 |
Phocaeicola dorei CL03T12C01 | 0.49 | ABI39_RS10200 | | 3-isopropylmalate dehydratase large subunit | 0.23 | ABI39_RS11840 | | histidinol-phosphate transaminase | 0.73 | 57 |
Methanococcus maripaludis JJ | 0.22 | MMJJ_RS08425 | | 3-isopropylmalate dehydratase large subunit | 0.15 | MMJJ_RS08090 | | histidinol-phosphate transaminase | — | — |
Methanococcus maripaludis S2 | 0.22 | MMP_RS05930 | | 3-isopropylmalate dehydratase large subunit | 0.15 | MMP_RS06260 | | histidinol-phosphate transaminase | — | — |
Desulfovibrio vulgaris Hildenborough JW710 | 0.22 | DVU2982 | leuC | 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) (from data) | 0.22 | DVU1029 | hisC | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.83 | 36 |
Desulfovibrio vulgaris Miyazaki F | 0.21 | DvMF_1792 | | 3-isopropylmalate dehydratase large subunit (RefSeq) | 0.21 | DvMF_0908 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.96 | 8 |
Not shown: 5 genomes with orthologs for Sama_0337 only; 0 genomes with orthologs for Sama_1943 only