Conservation of cofitness between b3960 and b3770 in Escherichia coli BW25113

100 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3960 argH argininosuccinate lyase (NCBI) 1.0 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.93 13
Escherichia coli BL21 1.00 ECD_03845 argininosuccinate lyase 1.00 ECD_03648 branched-chain amino acid aminotransferase 0.69 29
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04090 Argininosuccinate lyase 1.00 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Escherichia coli ECOR38 1.00 HEPCGN_12220 argH argininosuccinate lyase 1.00 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase low > 85
Escherichia fergusonii Becca 0.99 EFB2_04654 Argininosuccinate lyase 1.00 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS22855 argininosuccinate lyase 1.00 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 52
Escherichia coli ECRC62 0.99 BNILDI_05805 argH argininosuccinate lyase 1.00 BNILDI_04745 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECOR27 0.99 NOLOHH_05720 argH argininosuccinate lyase 1.00 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase low > 57
Escherichia coli ECRC101 0.99 OKFHMN_13575 argH argininosuccinate lyase 1.00 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC98 0.99 JDDGAC_17200 argH argininosuccinate lyase 1.00 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 0.99 MCAODC_04075 argH argininosuccinate lyase 1.00 MCAODC_05150 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC99 0.99 KEDOAH_14585 argH argininosuccinate lyase 1.00 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC102 0.99 NIAGMN_11325 argH argininosuccinate lyase 1.00 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase — —
Klebsiella michiganensis M5al 0.96 BWI76_RS00855 argininosuccinate lyase 0.97 BWI76_RS00970 branched chain amino acid aminotransferase 0.57 84
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2346 Argininosuccinate lyase (EC 4.3.2.1) 0.98 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Enterobacter asburiae PDN3 0.94 EX28DRAFT_4422 argininosuccinate lyase 0.98 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.78 35
Enterobacter sp. TBS_079 0.93 MPMX20_04520 Argininosuccinate lyase 0.99 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Serratia liquefaciens MT49 0.88 IAI46_24500 argininosuccinate lyase 0.92 IAI46_24350 branched-chain-amino-acid transaminase low > 86
Rahnella sp. WP5 0.88 EX31_RS14180 argininosuccinate lyase 0.90 EX31_RS15000 branched-chain amino acid transaminase 0.90 64
Pantoea sp. MT58 0.88 IAI47_00920 argininosuccinate lyase 0.91 IAI47_01030 branched-chain amino acid transaminase 0.98 3
Erwinia tracheiphila SCR3 0.88 LU632_RS19600 argH argininosuccinate lyase 0.90 LU632_RS24405 branched-chain amino acid transaminase 0.88 7
Dickeya dadantii 3937 0.86 DDA3937_RS20340 argininosuccinate lyase 0.91 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.61 73
Pectobacterium carotovorum WPP14 0.86 HER17_RS20620 argininosuccinate lyase 0.90 HER17_RS01070 branched-chain amino acid transaminase low > 75
Dickeya dianthicola 67-19 0.84 HGI48_RS00885 argininosuccinate lyase 0.90 HGI48_RS20300 branched-chain-amino-acid transaminase low > 71
Dickeya dianthicola ME23 0.84 DZA65_RS00945 argininosuccinate lyase 0.91 DZA65_RS21340 branched-chain amino acid transaminase low > 75
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_13360 argininosuccinate lyase 0.75 CSW01_00145 branched-chain-amino-acid transaminase low > 62
Shewanella amazonensis SB2B 0.65 Sama_0260 argininosuccinate lyase (RefSeq) 0.19 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.63 Shewana3_3901 argininosuccinate lyase (RefSeq) 0.19 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.63 SO0279 argH argininosuccinate lyase (NCBI ptt file) 0.19 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.83 76
Shewanella loihica PV-4 0.62 Shew_0206 argininosuccinate lyase (RefSeq) 0.68 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.92 36
Alteromonas macleodii MIT1002 0.57 MIT1002_00467 Argininosuccinate lyase 0.17 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.96 34
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_854 Argininosuccinate lyase (EC 4.3.2.1) 0.27 PfGW456L13_4923 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_2183 Argininosuccinate lyase (EC 4.3.2.1) 0.22 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Marinobacter adhaerens HP15 0.47 HP15_243 argininosuccinate lyase 0.43 HP15_436 branched-chain-amino-acid aminotransferase — —
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_09000 argininosuccinate lyase 0.20 AO353_26655 branched-chain amino acid aminotransferase low > 101
Pseudomonas simiae WCS417 0.47 PS417_27540 argininosuccinate lyase 0.21 PS417_17565 branched-chain amino acid aminotransferase — —
Pseudomonas sp. RS175 0.47 PFR28_04367 Argininosuccinate lyase 0.21 PFR28_02449 putative branched-chain-amino-acid aminotransferase — —
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_12780 argininosuccinate lyase 0.21 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_0065 argininosuccinate lyase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme — —
Pseudomonas sp. S08-1 0.47 OH686_13885 argininosuccinate lyase 0.46 OH686_09695 branched-chain amino acid aminotransferase low > 80
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_0065 argininosuccinate lyase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme — —
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_4429 Argininosuccinate lyase (EC 4.3.2.1) 0.21 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Pseudomonas fluorescens SBW25 0.47 PFLU_RS29220 argininosuccinate lyase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase — —
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS29220 argininosuccinate lyase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase — —
Pseudomonas putida KT2440 0.46 PP_0184 Argininosuccinate lyase 0.19 PP_3511 Branched-chain-amino-acid aminotransferase 0.81 16
Pseudomonas stutzeri RCH2 0.46 Psest_3751 argininosuccinate lyase 0.46 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Acinetobacter radioresistens SK82 0.45 MPMX26_00185 Argininosuccinate lyase 0.40 MPMX26_00445 Branched-chain-amino-acid aminotransferase 0.92 12
Azospirillum sp. SherDot2 0.45 MPMX19_05817 Argininosuccinate lyase 0.18 MPMX19_02406 Branched-chain-amino-acid aminotransferase — —
Azospirillum brasilense Sp245 0.45 AZOBR_RS16935 argininosuccinate lyase 0.31 AZOBR_RS16425 branched-chain amino acid aminotransferase — —
Phaeobacter inhibens DSM 17395 0.44 PGA1_c03450 argininosuccinate lyase ArgH 0.29 PGA1_c34110 branched-chain-amino-acid aminotransferase IlvE — —
Castellaniella sp019104865 MT123 0.44 ABCV34_RS03060 argininosuccinate lyase 0.45 ABCV34_RS07930 branched-chain amino acid transaminase — —
Dechlorosoma suillum PS 0.44 Dsui_0111 argininosuccinate lyase 0.47 Dsui_2030 branched-chain amino acid aminotransferase, group I — —
Sinorhizobium meliloti 1021 0.44 SMc00725 argininosuccinate lyase 0.21 SMc02896 branched-chain amino acid aminotransferase low > 103
Acidovorax sp. GW101-3H11 0.44 Ac3H11_1632 Argininosuccinate lyase (EC 4.3.2.1) 0.46 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Rhizobium sp. OAE497 0.44 ABIE40_RS17520 argininosuccinate lyase 0.19 ABIE40_RS22240 branched-chain amino acid aminotransferase — —
Agrobacterium fabrum C58 0.44 Atu3599 argininosuccinate lyase 0.18 Atu0871 branched-chain-amino-acid aminotransferase — —
Variovorax sp. SCN45 0.44 GFF3824 Argininosuccinate lyase (EC 4.3.2.1) 0.44 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Variovorax sp. OAS795 0.44 ABID97_RS08190 argininosuccinate lyase 0.44 ABID97_RS03790 branched-chain amino acid transaminase — —
Bosea sp. OAE506 0.44 ABIE41_RS08750 argininosuccinate lyase 0.28 ABIE41_RS11405 branched-chain amino acid aminotransferase — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS14685 argininosuccinate lyase 0.44 HSERO_RS03330 branched-chain amino acid aminotransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF736 Argininosuccinate lyase (EC 4.3.2.1) 0.46 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS16170 argininosuccinate lyase 0.25 ABZR87_RS18540 branched-chain amino acid aminotransferase low > 80
Rhodopseudomonas palustris CGA009 0.42 TX73_024645 argininosuccinate lyase 0.18 TX73_022650 branched-chain amino acid aminotransferase — —
Synechococcus elongatus PCC 7942 0.42 Synpcc7942_2475 argH argininosuccinate lyase 0.29 Synpcc7942_1029 ilvE branched-chain amino acid aminotransferase — —
Ralstonia solanacearum GMI1000 0.42 RS_RS11865 argininosuccinate lyase 0.45 RS_RS02840 branched-chain amino acid transaminase — —
Desulfovibrio vulgaris Hildenborough JW710 0.42 DVU1094 argH argininosuccinate lyase (TIGR) 0.46 DVU3197 ilvE branched-chain amino acid aminotransferase (TIGR) 0.91 11
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS05210 argininosuccinate lyase 0.43 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Dinoroseobacter shibae DFL-12 0.42 Dshi_3062 argininosuccinate lyase (RefSeq) 0.26 Dshi_3301 branched-chain amino acid aminotransferase (RefSeq) — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_00194 argininosuccinate lyase 0.43 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme low > 103
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS04280 argininosuccinate lyase 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase — —
Ralstonia solanacearum UW163 0.42 UW163_RS09390 argininosuccinate lyase 0.46 UW163_RS01455 branched-chain amino acid transaminase — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS15925 argininosuccinate lyase 0.20 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Paraburkholderia graminis OAS925 0.42 ABIE53_001311 argininosuccinate lyase 0.43 ABIE53_003432 branched-chain amino acid aminotransferase — —
Rhodospirillum rubrum S1H 0.41 Rru_A0397 Argininosuccinate lyase (NCBI) 0.32 Rru_A2223 Branched-chain amino acid aminotransferase I (NCBI) low > 58
Ralstonia solanacearum PSI07 0.41 RPSI07_RS13080 argininosuccinate lyase 0.45 RPSI07_RS21175 branched-chain amino acid transaminase — —
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS24970 argininosuccinate lyase 0.44 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Desulfovibrio vulgaris Miyazaki F 0.41 DvMF_0048 argininosuccinate lyase (RefSeq) 0.46 DvMF_2268 branched-chain amino acid aminotransferase (RefSeq) low > 51
Magnetospirillum magneticum AMB-1 0.41 AMB_RS22715 argininosuccinate lyase 0.31 AMB_RS02850 branched-chain amino acid aminotransferase — —
Caulobacter crescentus NA1000 0.40 CCNA_02294 argininosuccinate lyase 0.31 CCNA_03024 branched-chain amino acid aminotransferase — —
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_02294 argininosuccinate lyase 0.31 CCNA_03024 branched-chain amino acid aminotransferase — —
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_2049 argininosuccinate lyase 0.23 Ga0059261_3811 branched-chain amino acid aminotransferase, group II 0.97 11
Brevundimonas sp. GW460-12-10-14-LB2 0.39 A4249_RS12555 argininosuccinate lyase 0.27 A4249_RS09820 branched-chain amino acid aminotransferase — —
Bifidobacterium breve UCC2003 0.34 BBR_RS13955 argininosuccinate lyase 0.17 BBR_RS15210 branched-chain amino acid aminotransferase low > 34
Mycobacterium tuberculosis H37Rv 0.31 Rv1659 Probable argininosuccinate lyase ArgH 0.19 Rv2210c Branched-chain amino acid transaminase IlvE — —
Methanococcus maripaludis S2 0.31 MMP_RS00095 argininosuccinate lyase 0.31 MMP_RS00760 branched-chain-amino-acid transaminase — —
Methanococcus maripaludis JJ 0.31 MMJJ_RS05395 argininosuccinate lyase 0.31 MMJJ_RS04725 branched-chain-amino-acid transaminase — —
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS18485 arginosuccinate lyase (EC 4.3.2.1) (from data) 0.29 CA265_RS15785 branched-chain-amino-acid transaminase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_3852 arginosuccinate lyase (EC 4.3.2.1) (from data) 0.18 Echvi_2202 branched-chain amino acid aminotransferase, group II low > 79
Phocaeicola dorei CL03T12C01 0.25 ABI39_RS07095 argininosuccinate lyase 0.18 ABI39_RS01415 branched-chain amino acid aminotransferase 0.60 60
Phocaeicola vulgatus CL09T03C04 0.25 HMPREF1058_RS09585 argininosuccinate lyase 0.18 HMPREF1058_RS02220 branched-chain amino acid aminotransferase low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS12070 argininosuccinate lyase 0.16 ABZR88_RS22095 branched-chain amino acid aminotransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_06225 argininosuccinate lyase 0.32 CA264_06940 branched-chain amino acid aminotransferase low > 74
Bacteroides ovatus ATCC 8483 0.24 BACOVA_03551 argininosuccinate lyase 0.30 BACOVA_03679 branched-chain-amino-acid transaminase low > 94
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS03410 argininosuccinate lyase 0.19 HMPREF1181_RS06865 branched-chain amino acid aminotransferase low > 56
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_1980 argininosuccinate lyase 0.20 B158DRAFT_0078 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase low > 40
Lysobacter sp. OAE881 0.22 ABIE51_RS13380 argininosuccinate lyase 0.55 ABIE51_RS16505 branched-chain amino acid transaminase low > 62
Rhodanobacter sp. FW510-T8 0.20 OKGIIK_09430 argH argininosuccinate lyase 0.56 OKGIIK_11840 ilvE branched-chain amino acid transaminase low > 52
Rhodanobacter denitrificans FW104-10B01 0.20 LRK54_RS02380 argininosuccinate lyase 0.56 LRK54_RS12020 branched-chain amino acid transaminase low > 59
Rhodanobacter denitrificans MT42 0.20 LRK55_RS02135 argininosuccinate lyase 0.56 LRK55_RS11755 branched-chain amino acid transaminase low > 63
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS08695 arginosuccinate lyase (EC 4.3.2.1) (from data) 0.56 ABZR86_RS15965 branched-chain amino acid transaminase 0.95 8
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.2323.1 Argininosuccinate lyase (EC 4.3.2.1) 0.19 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 74

Not shown: 0 genomes with orthologs for b3960 only; 2 genomes with orthologs for b3770 only