| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b2954 | yggV | putative deoxyribonucleotide triphosphate pyrophosphatase (NCBI) | 1.0 | b2616 | recN | recombination and repair protein (NCBI) | 0.38 | 11 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS16430 | | XTP/dITP diphosphatase | 0.99 | ECOLIN_RS14775 | | DNA repair protein RecN | low | > 52 |
| Escherichia fergusonii Becca | 0.99 | EFB2_00948 | | dITP/XTP pyrophosphatase | 0.99 | EFB2_01277 | | DNA repair protein RecN | low | > 86 |
| Escherichia coli ECRC99 | 0.98 | KEDOAH_08900 | rdgB | XTP/dITP diphosphatase | 0.99 | KEDOAH_07075 | recN | DNA repair protein RecN | — | — |
| Escherichia coli ECRC62 | 0.98 | BNILDI_09690 | rdgB | XTP/dITP diphosphatase | 1.00 | BNILDI_11620 | recN | DNA repair protein RecN | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.98 | OHPLBJKB_00762 | | dITP/XTP pyrophosphatase | 1.00 | OHPLBJKB_01091 | | DNA repair protein RecN | low | > 73 |
| Escherichia coli ECOR27 | 0.98 | NOLOHH_11110 | rdgB | XTP/dITP diphosphatase | 1.00 | NOLOHH_12815 | recN | DNA repair protein RecN | low | > 57 |
| Escherichia coli ECRC101 | 0.98 | OKFHMN_19240 | rdgB | XTP/dITP diphosphatase | 0.99 | OKFHMN_21145 | recN | DNA repair protein RecN | — | — |
| Escherichia coli ECRC102 | 0.98 | NIAGMN_17005 | rdgB | XTP/dITP diphosphatase | 0.99 | NIAGMN_18915 | recN | DNA repair protein RecN | — | — |
| Escherichia coli ECRC98 | 0.98 | JDDGAC_22870 | rdgB | XTP/dITP diphosphatase | 0.99 | JDDGAC_24810 | recN | DNA repair protein RecN | — | — |
| Escherichia coli BL21 | 0.98 | ECD_02784 | | dITP/XTP pyrophosphatase | 1.00 | ECD_02504 | | recombination and repair protein | — | — |
| Escherichia coli ECRC101 | 0.98 | MCAODC_09760 | rdgB | XTP/dITP diphosphatase | 0.99 | MCAODC_11670 | recN | DNA repair protein RecN | — | — |
| Escherichia coli ECOR38 | 0.98 | HEPCGN_18545 | rdgB | XTP/dITP diphosphatase | 0.99 | HEPCGN_20265 | recN | DNA repair protein RecN | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.94 | GFF3057 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.92 | GFF4162 | | DNA repair protein RecN | low | > 78 |
| Enterobacter sp. TBS_079 | 0.91 | MPMX20_03812 | | dITP/XTP pyrophosphatase | 0.85 | MPMX20_03486 | | DNA repair protein RecN | low | > 85 |
| Klebsiella michiganensis M5al | 0.90 | BWI76_RS24115 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.84 | BWI76_RS21560 | | DNA repair protein RecN | low | > 92 |
| Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_2992 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.86 | EX28DRAFT_2719 | | DNA repair protein RecN | low | > 76 |
| Dickeya dianthicola 67-19 | 0.84 | HGI48_RS17365 | | XTP/dITP diphosphatase | 0.72 | HGI48_RS04320 | | DNA repair protein RecN | low | > 71 |
| Dickeya dianthicola ME23 | 0.83 | DZA65_RS18455 | | XTP/dITP diphosphatase | 0.72 | DZA65_RS04235 | | DNA repair protein RecN | low | > 75 |
| Dickeya dadantii 3937 | 0.83 | DDA3937_RS17320 | | XTP/dITP diphosphatase | 0.73 | DDA3937_RS04325 | | DNA repair protein RecN | 0.49 | 55 |
| Pantoea sp. MT58 | 0.82 | IAI47_03585 | | XTP/dITP diphosphatase | 0.77 | IAI47_04810 | | DNA repair protein RecN | low | > 76 |
| Rahnella sp. WP5 | 0.82 | EX31_RS02705 | | XTP/dITP diphosphatase | 0.75 | EX31_RS21760 | | DNA repair protein RecN | low | > 89 |
| Serratia liquefaciens MT49 | 0.79 | IAI46_21430 | | XTP/dITP diphosphatase | 0.77 | IAI46_19635 | | DNA repair protein RecN | 0.46 | 54 |
| Pectobacterium carotovorum WPP14 | 0.78 | HER17_RS03790 | | XTP/dITP diphosphatase | 0.72 | HER17_RS17420 | | DNA repair protein RecN | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.77 | LU632_RS05450 | | XTP/dITP diphosphatase | 0.73 | LU632_RS16985 | recN | DNA repair protein RecN | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.68 | CSW01_02430 | | non-canonical purine NTP pyrophosphatase | 0.53 | CSW01_04395 | | DNA repair protein RecN | low | > 62 |
| Marinobacter adhaerens HP15 | 0.66 | HP15_281 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.40 | HP15_3084 | | DNA repair protein RecN | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.63 | MIT1002_00940 | | dITP/XTP pyrophosphatase | 0.43 | MIT1002_01443 | | Recombination protein N | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.59 | B158DRAFT_0200 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.37 | B158DRAFT_0601 | | DNA replication and repair protein RecN | low | > 40 |
| Shewanella loihica PV-4 | 0.58 | Shew_1132 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (RefSeq) | 0.53 | Shew_1196 | | recombination and repair protein (RefSeq) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.58 | Xcc-8004.1223.1 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.30 | Xcc-8004.3431.1 | | DNA repair protein RecN | low | > 74 |
| Shewanella amazonensis SB2B | 0.56 | Sama_2482 | | Ham1-like protein (RefSeq) | 0.54 | Sama_1026 | | recombination and repair protein (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.56 | Shewana3_1189 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (RefSeq) | 0.55 | Shewana3_1104 | | recombination and repair protein (RefSeq) | low | > 73 |
| Lysobacter sp. OAE881 | 0.55 | ABIE51_RS17295 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.31 | ABIE51_RS11655 | | DNA repair protein RecN | low | > 62 |
| Shewanella oneidensis MR-1 | 0.55 | SO3358 | | HAM1 protein (NCBI ptt file) | 0.55 | SO3462 | recN | DNA repair protein RecN (NCBI ptt file) | low | > 76 |
| Herbaspirillum seropedicae SmR1 | 0.54 | HSERO_RS10660 | | nucleoside-triphosphate diphosphatase | 0.38 | HSERO_RS03060 | | DNA repair protein | low | > 78 |
| Ralstonia solanacearum UW163 | 0.52 | UW163_RS10370 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.36 | UW163_RS08210 | | DNA repair protein RecN | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.52 | RALBFv3_RS03350 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.36 | RALBFv3_RS05415 | | DNA repair protein RecN | low | > 76 |
| Dechlorosoma suillum PS | 0.52 | Dsui_0492 | | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family | 0.33 | Dsui_3072 | | DNA repair protein RecN | low | > 51 |
| Ralstonia sp. UNC404CL21Col | 0.51 | ABZR87_RS15260 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.36 | ABZR87_RS01065 | | DNA repair protein RecN | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.51 | RPSI07_RS13835 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.36 | RPSI07_RS11890 | | DNA repair protein RecN | — | — |
| Ralstonia solanacearum GMI1000 | 0.51 | RS_RS10835 | | non-canonical purine NTP pyrophosphatase | 0.35 | RS_RS13275 | | DNA repair protein RecN | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.51 | ABZR86_RS11905 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.34 | ABZR86_RS05665 | | DNA repair protein RecN | low | > 74 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.50 | Psyr_0472 | | Ham1-like protein | 0.38 | Psyr_4197 | | DNA replication and repair protein RecN | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.50 | Psyr_0472 | | Ham1-like protein | 0.38 | Psyr_4197 | | DNA replication and repair protein RecN | low | > 86 |
| Rhodanobacter sp. FW510-T8 | 0.50 | OKGIIK_12155 | rdgB | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.33 | OKGIIK_07340 | recN | DNA repair protein RecN | low | > 52 |
| Acinetobacter radioresistens SK82 | 0.50 | MPMX26_00400 | | dITP/XTP pyrophosphatase | 0.29 | MPMX26_00239 | | DNA repair protein RecN | low | > 36 |
| Pseudomonas simiae WCS417 | 0.49 | PS417_26755 | | nucleoside-triphosphate diphosphatase | 0.39 | PS417_24070 | | recombination and repair protein | low | > 88 |
| Cupriavidus basilensis FW507-4G11 | 0.49 | RR42_RS04885 | | nucleoside-triphosphate diphosphatase | 0.35 | RR42_RS05910 | | DNA repair protein | low | > 128 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_11015 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.39 | OH686_17050 | | DNA repair protein RecN | low | > 80 |
| Pseudomonas putida KT2440 | 0.49 | PP_5100 | | dITP/XTP pyrophosphatase | 0.37 | PP_4729 | | factor used in recombination and DNA repair | low | > 96 |
| Paraburkholderia graminis OAS925 | 0.49 | ABIE53_003235 | | XTP/dITP diphosphohydrolase | 0.35 | ABIE53_000856 | | DNA repair protein RecN (Recombination protein N) | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.49 | H281DRAFT_04009 | | XTP/dITP diphosphohydrolase | 0.35 | H281DRAFT_04692 | | DNA replication and repair protein RecN | low | > 103 |
| Rhodanobacter denitrificans MT42 | 0.49 | LRK55_RS11465 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.33 | LRK55_RS17815 | | DNA repair protein RecN | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.49 | LRK54_RS11740 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.33 | LRK54_RS17960 | | DNA repair protein RecN | low | > 59 |
| Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS28400 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.38 | PFLU_RS25910 | | DNA repair protein RecN | low | > 109 |
| Pseudomonas sp. RS175 | 0.49 | PFR28_04248 | | dITP/XTP pyrophosphatase | 0.39 | PFR28_00071 | | DNA repair protein RecN | low | > 88 |
| Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS03640 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.37 | QEN71_RS26535 | | DNA repair protein RecN | low | > 153 |
| Pseudomonas fluorescens FW300-N2E3 | 0.49 | AO353_08195 | | non-canonical purine NTP pyrophosphatase | 0.38 | AO353_05660 | | DNA repair protein RecN | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS28400 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.38 | PFLU_RS25910 | | DNA repair protein RecN | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_4594 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.39 | Pf6N2E2_3370 | | DNA repair protein RecN | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_13395 | | non-canonical purine NTP pyrophosphatase | 0.38 | AO356_07510 | | DNA repair protein RecN | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.48 | PfGW456L13_1004 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.40 | PfGW456L13_5106 | | DNA repair protein RecN | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_2335 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.39 | Pf1N1B4_1178 | | DNA repair protein RecN | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_0277 | | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family | 0.38 | Psest_0962 | | DNA repair protein RecN | low | > 67 |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS15330 | | nucleoside-triphosphate diphosphatase | 0.35 | BPHYT_RS03560 | | DNA repair protein | low | > 109 |
| Castellaniella sp019104865 MT123 | 0.46 | ABCV34_RS03520 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.33 | ABCV34_RS07470 | | DNA repair protein RecN | low | > 48 |
| Desulfovibrio vulgaris Miyazaki F | 0.46 | DvMF_1699 | | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (RefSeq) | 0.09 | DvMF_0923 | | SMC domain protein (RefSeq) | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.44 | GFF3255 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.32 | GFF829 | | DNA repair protein RecN | low | > 90 |
| Variovorax sp. SCN45 | 0.42 | GFF2382 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.66) | 0.32 | GFF2357 | | DNA repair protein RecN | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.42 | Ac3H11_3671 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.32 | Ac3H11_3460 | | DNA repair protein RecN | low | > 79 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.40 | DVU3154 | | HAM1 family protein (TIGR) | 0.17 | DVU2463 | recN | DNA repair protein RecN (TIGR) | — | — |
| Bifidobacterium breve UCC2003 | 0.36 | BBR_RS12410 | | non-canonical purine NTP pyrophosphatase | 0.15 | BBR_RS14030 | | DNA repair protein RecN | low | > 34 |
| Rhodospirillum rubrum S1H | 0.35 | Rru_A3640 | | Ham1-like protein (NCBI) | 0.24 | Rru_A0940 | | DNA repair protein RecN (NCBI) | — | — |
| Synechococcus elongatus PCC 7942 | 0.35 | Synpcc7942_1266 | rdgB | Ham1-like protein | 0.23 | Synpcc7942_1779 | recN | DNA repair protein RecN | low | > 38 |
| Magnetospirillum magneticum AMB-1 | 0.35 | AMB_RS22765 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.27 | AMB_RS19520 | | DNA repair protein RecN | — | — |
| Mycobacterium tuberculosis H37Rv | 0.34 | Rv1341 | | Conserved protein | 0.21 | Rv1696 | | Probable DNA repair protein RecN (recombination protein N) | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.33 | ABZR88_RS21980 | | non-canonical purine NTP diphosphatase | 0.26 | ABZR88_RS06580 | | DNA repair protein RecN | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.33 | Ga0059261_2742 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.25 | Ga0059261_1026 | | DNA repair protein RecN | low | > 68 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.32 | Echvi_1180 | | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family | 0.23 | Echvi_2067 | | DNA repair protein RecN | low | > 79 |
| Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_00145 | | xanthosine triphosphate pyrophosphatase | 0.21 | CCNA_02062 | | DNA repair protein recN | low | > 67 |
| Caulobacter crescentus NA1000 | 0.32 | CCNA_00145 | | xanthosine triphosphate pyrophosphatase | 0.21 | CCNA_02062 | | DNA repair protein recN | low | > 66 |
| Sinorhizobium meliloti 1021 | 0.31 | SMc01146 | | deoxyribonucleotide triphosphate pyrophosphatase | 0.27 | SMc01877 | | DNA repair protein | low | > 103 |
| Bacteroides stercoris CC31F | 0.30 | HMPREF1181_RS01925 | | non-canonical purine NTP diphosphatase | 0.24 | HMPREF1181_RS10900 | | DNA repair protein RecN | low | > 56 |
| Phocaeicola dorei CL03T12C01 | 0.30 | ABI39_RS05750 | | non-canonical purine NTP diphosphatase | 0.23 | ABI39_RS14500 | | DNA repair protein RecN | low | > 72 |
| Bosea sp. OAE506 | 0.30 | ABIE41_RS03300 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.24 | ABIE41_RS12645 | | DNA repair protein RecN | low | > 77 |
| Agrobacterium fabrum C58 | 0.29 | Atu0326 | | putative deoxyribonucleotide triphosphate pyrophosphatase | 0.26 | Atu2083 | | DNA repair protein RecN | — | — |
| Phaeobacter inhibens DSM 17395 | 0.29 | PGA1_c35040 | | nucleoside-triphosphatase RdgB | 0.24 | PGA1_c09720 | | DNA repair protein RecN | low | > 62 |
| Phocaeicola vulgatus CL09T03C04 | 0.29 | HMPREF1058_RS11235 | | non-canonical purine NTP diphosphatase | 0.23 | HMPREF1058_RS18225 | | DNA repair protein RecN | low | > 67 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.28 | A4249_RS12440 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.22 | A4249_RS02620 | | DNA repair protein RecN | — | — |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_001705 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.24 | TX73_018240 | | DNA repair protein RecN | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.28 | Dshi_3462 | | Ham1 family protein (RefSeq) | 0.24 | Dshi_2413 | | DNA repair protein RecN (RefSeq) | low | > 64 |
| Bacteroides ovatus ATCC 8483 | 0.28 | BACOVA_02837 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.24 | BACOVA_00200 | | DNA repair protein RecN | low | > 94 |
| Parabacteroides merdae CL09T00C40 | 0.28 | HMPREF1078_RS06565 | | non-canonical purine NTP diphosphatase | 0.25 | HMPREF1078_RS02000 | | DNA repair protein RecN | low | > 61 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.27 | BT3128 | | putative xanthosine triphosphate pyrophosphatase (NCBI ptt file) | 0.25 | BT1361 | | DNA repair protein recN (Recombination protein N) (NCBI ptt file) | low | > 81 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.27 | CA264_19890 | | non-canonical purine NTP pyrophosphatase | 0.21 | CA264_13235 | | DNA repair protein RecN | low | > 74 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.27 | CA265_RS24990 | | non-canonical purine NTP pyrophosphatase | 0.23 | CA265_RS14855 | | DNA repair protein RecN | low | > 88 |
| Azospirillum brasilense Sp245 | 0.25 | AZOBR_RS02200 | | nucleoside-triphosphate diphosphatase | 0.24 | AZOBR_RS12395 | | DNA repair protein RecN | — | — |
| Azospirillum sp. SherDot2 | 0.24 | MPMX19_02575 | | dITP/XTP pyrophosphatase | 0.24 | MPMX19_01601 | | DNA repair protein RecN | low | > 112 |
Not shown: 4 genomes with orthologs for b2954 only; 1 genomes with orthologs for b2616 only