Homologs of Pf1N1B4_3906 from Pseudomonas fluorescens FW300-N1B4

DNA topoisomerase I (EC 5.99.1.2)
SEED: DNA topoisomerase I (EC 5.99.1.2)
KEGG: DNA topoisomerase I

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3906 DNA topoisomerase I (EC 5.99.1.2) strong 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4038 DNA topoisomerase I (EC 5.99.1.2) strong 98 100
o Pseudomonas sp. RS175 PFR28_01113 DNA topoisomerase 1 strong 96 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2287 DNA topoisomerase I (EC 5.99.1.2) no data 97 99
o Pseudomonas fluorescens SBW25 PFLU_RS07665 type I DNA topoisomerase strong 97 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07665 type I DNA topoisomerase strong 97 100
o Pseudomonas fluorescens FW300-N2C3 AO356_02315 DNA topoisomerase I strong 97 99
o Pseudomonas simiae WCS417 PS417_07590 DNA topoisomerase I no data 96 100
o Pseudomonas fluorescens FW300-N2E3 AO353_00495 DNA topoisomerase I strong 96 99
o Pseudomonas syringae pv. syringae B728a Psyr_3287 DNA topoisomerase I strong 93 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3287 DNA topoisomerase I no data 93 99
o Pseudomonas putida KT2440 PP_2139 DNA topoisomerase I no data 91 99
o Pseudomonas stutzeri RCH2 Psest_2651 DNA topoisomerase I, bacterial strong 89 99
o Pseudomonas sp. S08-1 OH686_21940 DNA topoisomerase I no data 87 99
o Marinobacter adhaerens HP15 HP15_1514 DNA topoisomerase I no data 70 99
o Shewanella amazonensis SB2B Sama_1322 DNA topoisomerase I (RefSeq) no data 67 99
o Shewanella sp. ANA-3 Shewana3_1729 DNA topoisomerase I (RefSeq) no data 67 100
o Shewanella oneidensis MR-1 SO2705 topA DNA topoisomerase I (NCBI ptt file) no data 67 100
o Escherichia coli BL21 ECD_01250 DNA topoisomerase I, omega subunit strong 67 99
o Escherichia coli ECOR27 NOLOHH_20270 type I DNA topoisomerase no data 67 99
o Escherichia coli ECOR38 HEPCGN_25595 type I DNA topoisomerase cofit 67 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02410 DNA topoisomerase 1 strong 67 99
o Escherichia coli BW25113 b1274 topA DNA topoisomerase I (NCBI) no data 67 99
o Escherichia fergusonii Becca EFB2_02653 DNA topoisomerase 1 strong 67 99
o Escherichia coli ECRC101 OKFHMN_02605 type I DNA topoisomerase no data 67 99
o Escherichia coli ECRC101 MCAODC_15660 type I DNA topoisomerase no data 67 99
o Escherichia coli ECRC102 NIAGMN_26775 type I DNA topoisomerase no data 67 99
o Escherichia coli ECRC98 JDDGAC_05150 type I DNA topoisomerase no data 67 99
o Escherichia coli ECRC99 KEDOAH_26160 type I DNA topoisomerase no data 67 99
o Escherichia coli ECRC62 BNILDI_18420 type I DNA topoisomerase no data 67 99
o Escherichia coli Nissle 1917 ECOLIN_RS07675 type I DNA topoisomerase no data 67 99
o Pantoea sp. MT58 IAI47_09235 type I DNA topoisomerase insig. 67 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2714 DNA topoisomerase I (EC 5.99.1.2) no data 66 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_08695 DNA topoisomerase 1 no data 66 100
o Shewanella loihica PV-4 Shew_2224 DNA topoisomerase I (RefSeq) no data 67 99
o Alteromonas macleodii MIT1002 MIT1002_01705 DNA topoisomerase 1 no data 66 99
o Kangiella aquimarina DSM 16071 B158DRAFT_2227 DNA topoisomerase I, bacterial strong 66 99
o Klebsiella michiganensis M5al BWI76_RS11925 DNA topoisomerase I no data 66 99
o Dickeya dadantii 3937 DDA3937_RS10535 type I DNA topoisomerase no data 66 99
o Enterobacter sp. TBS_079 MPMX20_02502 DNA topoisomerase 1 no data 66 99
o Rahnella sp. WP5 EX31_RS09895 type I DNA topoisomerase cofit 67 99
o Enterobacter asburiae PDN3 EX28DRAFT_0945 DNA topoisomerase I, bacterial no data 66 99
o Serratia liquefaciens MT49 IAI46_13970 type I DNA topoisomerase sig. 66 99
o Dickeya dianthicola ME23 DZA65_RS11015 type I DNA topoisomerase no data 66 99
o Dickeya dianthicola 67-19 HGI48_RS10535 type I DNA topoisomerase no data 66 99
o Pectobacterium carotovorum WPP14 HER17_RS10875 type I DNA topoisomerase no data 66 99
o Erwinia tracheiphila SCR3 LU632_RS12555 topA type I DNA topoisomerase no data 64 100
o Acinetobacter radioresistens SK82 MPMX26_00365 DNA topoisomerase 1 no data 65 99
o Desulfovibrio vulgaris Miyazaki F DvMF_2069 DNA topoisomerase I (RefSeq) no data 39 86
o Desulfovibrio vulgaris Hildenborough JW710 DVU3389 topA DNA topoisomerase I (TIGR) no data 38 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3133 DNA topoisomerase I, bacterial no data 44 68
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07630 DNA topoisomerase I no data 43 67
  Dinoroseobacter shibae DFL-12 Dshi_1137 DNA topoisomerase I (RefSeq) no data 41 71
  Rhodanobacter sp. FW510-T8 OKGIIK_13765 topA DNA topoisomerase I no data 45 67
  Azospirillum sp. SherDot2 MPMX19_01509 DNA topoisomerase 1 no data 40 75
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4752.1 DNA topoisomerase I (EC 5.99.1.2) insig. 43 67
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05015 type I DNA topoisomerase no data 42 67
  Azospirillum brasilense Sp245 AZOBR_RS15890 DNA topoisomerase I strong 40 75
  Rhodanobacter denitrificans MT42 LRK55_RS09790 DNA topoisomerase I no data 44 67
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10150 DNA topoisomerase I strong 44 67
  Phaeobacter inhibens DSM 17395 PGA1_c06220 DNA topoisomerase TopA no data 40 71
  Rhodospirillum rubrum S1H Rru_A3202 DNA topoisomerase (NCBI) strong 40 73
  Rhodopseudomonas palustris CGA009 TX73_016155 type I DNA topoisomerase strong 40 71
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12100 type I DNA topoisomerase no data 41 71
  Phocaeicola dorei CL03T12C01 ABI39_RS04700 type I DNA topoisomerase strong 41 71
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07115 DNA topoisomerase I no data 41 67
  Caulobacter crescentus NA1000 CCNA_02535 DNA topoisomerase I insig. 40 73
  Caulobacter crescentus NA1000 Δfur CCNA_02535 DNA topoisomerase I no data 40 73
  Magnetospirillum magneticum AMB-1 AMB_RS03505 type I DNA topoisomerase no data 42 71
  Bacteroides stercoris CC31F HMPREF1181_RS01095 type I DNA topoisomerase strong 40 72
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13865 DNA topoisomerase I sig. 42 71
  Lysobacter sp. OAE881 ABIE51_RS02220 DNA topoisomerase I strong 42 67
  Bosea sp. OAE506 ABIE41_RS17240 type I DNA topoisomerase no data 40 75
  Agrobacterium fabrum C58 Atu1304 DNA topoisomerase I no data 39 71
  Sinorhizobium meliloti 1021 SMc01364 DNA topoisomerase I insig. 38 75
  Rhizobium sp. OAE497 ABIE40_RS07355 type I DNA topoisomerase sig. 38 75
o Fusobacterium nucleatum SB010 HUW76_06805 type I DNA topoisomerase no data 34 85
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04230 type I DNA topoisomerase no data 40 71
  Mycobacterium tuberculosis H37Rv Rv3646c DNA topoisomerase I TopA (omega-protein) (relaxing enzyme) (untwisting enzyme) (swivelase) (type I DNA topoisomerase) (nicking-closing enzyme) (TOPO I) no data 41 73
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2450 DNA topoisomerase I, bacterial no data 41 71
  Bacteroides thetaiotaomicron VPI-5482 BT2827 DNA topoisomerase I (NCBI ptt file) no data 39 71
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11640 type I DNA topoisomerase no data 41 67
  Bifidobacterium breve UCC2003 BBR_RS11185 type I DNA topoisomerase sig. 41 66
  Bacteroides ovatus ATCC 8483 BACOVA_02074 DNA topoisomerase I no data 40 67
  Synechococcus elongatus PCC 7942 Synpcc7942_1416 topA DNA topoisomerase I no data 39 73
o Methanococcus maripaludis JJ MMJJ_RS00180 DNA topoisomerase I strong 29 91
o Methanococcus maripaludis S2 MMP_RS04955 DNA topoisomerase I strong 28 91
  Ralstonia sp. UNC404CL21Col ABZR87_RS04995 DNA topoisomerase III strong 26 70
  Ralstonia solanacearum PSI07 RPSI07_RS23620 DNA topoisomerase III no data 27 70
  Herbaspirillum seropedicae SmR1 HSERO_RS23390 DNA topoisomerase III no data 28 60
  Ralstonia solanacearum GMI1000 RS_RS00330 DNA topoisomerase III no data 26 70
  Cupriavidus basilensis FW507-4G11 RR42_RS20490 DNA topoisomerase III no data 28 64
  Dechlorosoma suillum PS Dsui_0821 DNA topoisomerase III no data 28 70
  Pseudomonas fluorescens FW300-N2C3 AO356_00120 DNA topoisomerase III insig. 27 63
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09745 DNA topoisomerase III no data 26 70
  Ralstonia solanacearum UW163 UW163_RS03835 DNA topoisomerase III no data 26 70
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_972 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster insig. 28 64
  Paraburkholderia sabiae LMG 24235 QEN71_RS00140 DNA topoisomerase III no data 28 60
  Acidovorax sp. GW101-3H11 Ac3H11_1268 DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) insig. 28 60
  Paraburkholderia graminis OAS925 ABIE53_000384 DNA topoisomerase-3 no data 28 60