Homologs of MIT1002_04071 from Alteromonas macleodii MIT1002

Ribonuclease PH
SEED: Ribonuclease PH (EC 2.7.7.56)
KEGG: ribonuclease PH

162 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Alteromonas macleodii MIT1002 MIT1002_04071 Ribonuclease PH strong 100 100
o Shewanella loihica PV-4 Shew_3488 ribonuclease PH (RefSeq) strong 76 100
o Shewanella sp. ANA-3 Shewana3_3777 RNAse PH (RefSeq) strong 75 100
o Shewanella oneidensis MR-1 SO4256 rph ribonuclease PH (NCBI ptt file) strong 75 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0588 ribonuclease PH cofit 73 100
o Dickeya dianthicola 67-19 HGI48_RS00675 ribonuclease PH cofit 75 100
o Dickeya dianthicola ME23 DZA65_RS00730 ribonuclease PH insig. 75 100
o Shewanella amazonensis SB2B Sama_0320 tRNA nucleotidyltransferase (RefSeq) strong 74 100
o Dickeya dadantii 3937 DDA3937_RS20540 ribonuclease PH cofit 74 100
o Pectobacterium carotovorum WPP14 HER17_RS20855 ribonuclease PH cofit 75 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF366 Ribonuclease PH (EC 2.7.7.56) sig. 75 100
o Rahnella sp. WP5 EX31_RS14505 ribonuclease PH cofit 74 100
o Enterobacter asburiae PDN3 EX28DRAFT_3893 ribonuclease PH insig. 74 100
o Enterobacter sp. TBS_079 MPMX20_00092 Ribonuclease PH insig. 74 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_07755 rph ribonuclease PH cofit 73 100
o Erwinia tracheiphila SCR3 LU632_RS22020 rph ribonuclease PH sig. 73 100
o Serratia liquefaciens MT49 IAI46_24850 ribonuclease PH insig. 73 100
o Erwinia amylovora T8 OLJFJH_05765 ribonuclease PH sig. 74 100
o Pantoea sp. MT58 IAI47_00595 ribonuclease PH sig. 74 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS00585 rph ribonuclease PH cofit 74 100
o Klebsiella michiganensis M5al BWI76_RS27390 ribonuclease PH strong 73 100
o Klebsiella pneumoniae MKP103 KDGMDA_08055 ribonuclease PH strong 73 100
o Klebsiella pneumoniae MRSN742743 KFA93_RS09105 rph;go_function=tRNA ribonuclease PH sig. 73 100
o Marinobacter adhaerens HP15 HP15_300 ribonuclease PH strong 71 100
o Pseudomonas sp. S08-1 OH686_13570 ribonuclease PH insig. 70 100
o Escherichia coli BL21 ECD_03500 ribonuclease PH sig. 73 100
o Escherichia coli ECRC62 BNILDI_04045 rph ribonuclease PH cofit 73 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00059 Ribonuclease PH sig. 73 100
o Pseudomonas aeruginosa MRSN321 DY961_RS12560 rph;go_function=tRNA-specific ribonuclease PH strong 69 100
o Pseudomonas aeruginosa PA14 IKLFDK_26785 ribonuclease PH strong 69 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS49565 rph;go_function=tRNA-specific ribonuclease PH sig. 69 100
o Escherichia fergusonii Becca EFB2_00170 Ribonuclease PH sig. 72 100
o Escherichia coli ECOR27 NOLOHH_07470 rph ribonuclease PH insig. 72 100
o Escherichia coli ECOR38 HEPCGN_14410 rph ribonuclease PH insig. 72 100
o Escherichia coli ECRC100 OKFHMN_15590 rph ribonuclease PH cofit 72 100
o Escherichia coli ECRC101 MCAODC_06100 rph ribonuclease PH sig. 72 100
o Escherichia coli ECRC102 NIAGMN_13350 rph ribonuclease PH sig. 72 100
o Escherichia coli ECRC98 JDDGAC_19215 rph ribonuclease PH strong 72 100
o Escherichia coli ECRC99 KEDOAH_12555 rph ribonuclease PH no data 72 100
o Escherichia coli Nissle 1917 ECOLIN_RS20755 ribonuclease PH cofit 72 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_01115 ribonuclease PH insig. 69 100
o Escherichia coli BW25113 b3643 rph ribonuclease PH (NCBI) strong 77 89
o Pseudomonas stutzeri RCH2 Psest_3813 ribonuclease PH sig. 68 100
o Pseudomonas fluorescens FW300-N2E3 AO353_09260 ribonuclease PH strong 68 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) strong 68 100
o Pseudomonas sp. DMC3 GFF415 Ribonuclease PH cofit 68 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) strong 68 100
o Pseudomonas fluorescens FW300-N2C3 AO356_12500 ribonuclease PH strong 68 100
o Pseudomonas sp. RS175 PFR28_04420 Ribonuclease PH strong 68 100
o Pseudomonas segetis P6 ACVTMO_RS00150 rph ribonuclease PH strong 68 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) strong 67 100
o Pseudomonas sp. SVBP6 COO64_RS01510 rph ribonuclease PH insig. 68 100
o Pseudomonas protegens RBAN4 FABNJH_30565 rph ribonuclease PH insig. 68 100
o Pseudomonas syringae pv. syringae B728a Psyr_0213 RNAse PH sig. 68 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0213 RNAse PH insig. 68 100
o Pseudomonas orientalis W4I3 QF045_RS02165 ribonuclease PH cofit 68 100
o Pseudomonas fluorescens SBW25 PFLU_RS29490 ribonuclease PH strong 67 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29490 ribonuclease PH strong 67 100
o Pseudomonas simiae WCS417 PS417_27810 ribonuclease PH strong 67 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00030 Ribonuclease PH insig. 68 100
o Pseudomonas putida KT2440 PP_5294 Ribonuclease PH strong 66 100
o Pseudomonas sp. BP01 JOY50_RS09025 rph ribonuclease PH cofit 66 100
o Dechlorosoma suillum PS Dsui_0494 ribonuclease PH insig. 64 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) sig. 65 100
o Acinetobacter radioresistens SK82 MPMX26_00040 Ribonuclease PH strong 63 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS11900 ribonuclease PH strong 63 100
o Ralstonia solanacearum PSI07 RPSI07_RS13840 ribonuclease PH no data 62 100
o Methylophilus sp. DMC18 GFF2136 Ribonuclease PH insig. 61 100
o Herbaspirillum seropedicae SmR1 HSERO_RS10655 ribonuclease PH sig. 60 99
o Acinetobacter baumannii LAC-4 RR41_RS18695 ribonuclease PH no data 63 100
o Ralstonia solanacearum GMI1000 RS_RS10830 ribonuclease PH no data 62 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS15255 ribonuclease PH strong 62 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3254 Ribonuclease PH (EC 2.7.7.56) insig. 63 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS03645 ribonuclease PH cofit 61 99
o Variovorax sp. SCN45 GFF2381 Ribonuclease PH (EC 2.7.7.56) cofit 63 99
o Lysobacter sp. OAE881 ABIE51_RS17285 ribonuclease PH cofit 63 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03345 ribonuclease PH insig. 61 100
o Ralstonia solanacearum UW163 UW163_RS10375 ribonuclease PH insig. 61 100
o Burkholderia phytofirmans PsJN BPHYT_RS15325 ribonuclease PH sig. 61 99
o Paraburkholderia graminis OAS925 ABIE53_003234 ribonuclease PH strong 61 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04008 RNAse PH sig. 60 99
o Variovorax sp. OAS795 ABID97_RS23640 ribonuclease PH sig. 62 99
o Acidovorax sp. GW101-3H11 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) insig. 65 95
o Cupriavidus basilensis FW507-4G11 RR42_RS04890 ribonuclease PH sig. 61 100
o Rhodanobacter denitrificans MT42 LRK55_RS11470 ribonuclease PH insig. 61 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS11745 ribonuclease PH strong 61 100
o Sinorhizobium meliloti 1021 SMc01144 ribonuclease PH strong 60 100
o Rhizobium sp. OAE497 ABIE40_RS01640 ribonuclease PH cofit 59 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS16795 ribonuclease PH no data 60 100
o Rhodopseudomonas palustris CGA009 TX73_001710 ribonuclease PH insig. 59 100
o Rhodanobacter sp. FW510-T8 OKGIIK_12150 rph ribonuclease PH no data 59 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13125 ribonuclease PH insig. 59 100
o Bosea sp. OAE506 ABIE41_RS03295 ribonuclease PH insig. 59 100
o Xanthobacter sp. DMC5 GFF1893 Ribonuclease PH no data 58 100
o Castellaniella sp019104865 MT123 ABCV34_RS03515 ribonuclease PH cofit 59 99
o Agrobacterium fabrum C58 Atu0327 ribonuclease PH no data 59 100
o Azospirillum brasilense Sp245 AZOBR_RS02205 ribonuclease PH insig. 56 100
o Dinoroseobacter shibae DFL-12 Dshi_3463 ribonuclease PH (RefSeq) sig. 60 99
o Caulobacter crescentus NA1000 CCNA_00151 ribonuclease PH sig. 56 100
o Caulobacter crescentus NA1000 Δfur CCNA_00151 ribonuclease PH cofit 56 100
o Sphingobium sp. HT1-2 GFF2617 Ribonuclease PH (EC 2.7.7.56) insig. 58 99
o Phaeobacter inhibens DSM 17395 PGA1_c35030 ribonuclease PH sig. 57 99
o Rhodospirillum rubrum S1H Rru_A3641 Ribonuclease PH (NCBI) insig. 55 100
o Mycobacterium tuberculosis H37Rv Rv1340 Probable ribonuclease RphA (RNase PH) (tRNA nucleotidyltransferase) no data 58 100
o Magnetospirillum magneticum AMB-1 AMB_RS22760 ribonuclease PH insig. 56 100
o Azospirillum sp. SherDot2 MPMX19_02576 Ribonuclease PH insig. 54 100
o Bifidobacterium breve UCC2003 BBR_RS12405 ribonuclease PH strong 56 96
  Fusobacterium nucleatum SB010 HUW76_01880 ribonuclease PH strong 52 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2741 ribonuclease PH no data 59 99
o Synechococcus elongatus PCC 7942 Synpcc7942_1073 rph ribonuclease PH insig. 49 100
  Ralstonia solanacearum GMI1000 RS_RS10375 polyribonucleotide nucleotidyltransferase insig. 28 82
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03005 polyribonucleotide nucleotidyltransferase insig. 28 82
  Ralstonia solanacearum PSI07 RPSI07_RS14305 polyribonucleotide nucleotidyltransferase insig. 28 82
  Ralstonia solanacearum UW163 UW163_RS10720 polyribonucleotide nucleotidyltransferase no data 28 82
  Cupriavidus basilensis FW507-4G11 RR42_RS05485 polynucleotide phosphorylase/polyadenylase strong 28 82
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2140 polyribonucleotide nucleotidyltransferase no data 28 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS24175 polyribonucleotide nucleotidyltransferase no data 27 82
  Ralstonia sp. UNC404CL21Col ABZR87_RS14910 polyribonucleotide nucleotidyltransferase strong 27 82
  Paraburkholderia graminis OAS925 ABIE53_001586 polyribonucleotide nucleotidyltransferase strong 27 82
  Sphingobium sp. HT1-2 GFF2343 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) no data 27 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04562 polyribonucleotide nucleotidyltransferase sig. 27 82
  Dechlorosoma suillum PS Dsui_2718 polyribonucleotide nucleotidyltransferase sig. 27 82
  Burkholderia phytofirmans PsJN BPHYT_RS06600 polynucleotide phosphorylase/polyadenylase sig. 27 82
  Methylophilus sp. DMC18 GFF2832 Polyribonucleotide nucleotidyltransferase cofit 26 82
  Herbaspirillum seropedicae SmR1 HSERO_RS08755 polynucleotide phosphorylase/polyadenylase no data 27 82
  Acidovorax sp. GW101-3H11 Ac3H11_1456 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) no data 26 82
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3677 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) no data 27 82
  Rhodospirillum rubrum S1H Rru_A3785 3' exoribonuclease (NCBI) no data 22 82
  Pseudomonas sp. BP01 JOY50_RS26855 pnp polyribonucleotide nucleotidyltransferase no data 26 82
  Pseudomonas sp. SVBP6 COO64_RS15150 pnp polyribonucleotide nucleotidyltransferase no data 26 82
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1156 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) no data 26 82
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04941 Polyribonucleotide nucleotidyltransferase cofit 26 82
  Pseudomonas putida KT2440 PP_4708 Polyribonucleotide nucleotidyltransferase no data 26 82
  Pseudomonas fluorescens FW300-N2E3 AO353_05540 polyribonucleotide nucleotidyltransferase no data 26 82
  Pseudomonas fluorescens FW300-N2C3 AO356_07390 polyribonucleotide nucleotidyltransferase insig. 26 82
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS06490 polyribonucleotide nucleotidyltransferase no data 27 94
  Pseudomonas fluorescens SBW25 PFLU_RS25790 polyribonucleotide nucleotidyltransferase strong 26 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25790 polyribonucleotide nucleotidyltransferase strong 26 82
  Pseudomonas protegens RBAN4 FABNJH_04410 pnp polyribonucleotide nucleotidyltransferase no data 26 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_5084 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) no data 26 82
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3349 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) strong 26 82
  Variovorax sp. OAS795 ABID97_RS20520 polyribonucleotide nucleotidyltransferase strong 26 82
  Castellaniella sp019104865 MT123 ABCV34_RS01240 polyribonucleotide nucleotidyltransferase no data 26 82
  Variovorax sp. SCN45 GFF4746 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) no data 26 82
  Xanthobacter sp. DMC5 GFF2302 Polyribonucleotide nucleotidyltransferase no data 25 82
  Pseudomonas sp. DMC3 GFF4992 Polyribonucleotide nucleotidyltransferase cofit 26 82
  Pseudomonas simiae WCS417 PS417_23950 polynucleotide phosphorylase/polyadenylase strong 26 82
  Pseudomonas orientalis W4I3 QF045_RS26205 polyribonucleotide nucleotidyltransferase no data 26 82
  Pseudomonas syringae pv. syringae B728a Psyr_4176 Polyribonucleotide nucleotidyltransferase no data 26 82
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4176 Polyribonucleotide nucleotidyltransferase no data 26 82
  Magnetospirillum magneticum AMB-1 AMB_RS20820 polyribonucleotide nucleotidyltransferase no data 25 82
  Pseudomonas sp. RS175 PFR28_00094 Polyribonucleotide nucleotidyltransferase no data 26 82
  Pseudomonas aeruginosa MRSN321 DY961_RS09440 pnp;go_function=polyribonucleotide polyribonucleotide nucleotidyltransferase no data 26 82
  Pseudomonas aeruginosa PA14 IKLFDK_29900 polyribonucleotide nucleotidyltransferase strong 26 82
  Pseudomonas aeruginosa PUPa3 DQ20_RS52590 pnp;go_function=polyribonucleotide polyribonucleotide nucleotidyltransferase no data 26 82
  Fusobacterium nucleatum SB010 HUW76_01280 polyribonucleotide nucleotidyltransferase no data 25 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12555 polyribonucleotide nucleotidyltransferase no data 23 97
  Pseudomonas segetis P6 ACVTMO_RS05975 pnp polyribonucleotide nucleotidyltransferase no data 26 86
  Phocaeicola dorei CL03T12C01 ABI39_RS04155 polyribonucleotide nucleotidyltransferase no data 23 97
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10195 polyribonucleotide nucleotidyltransferase insig. 22 82
  Synechocystis sp000284455 PCC 6803 SGL_RS02295 polyribonucleotide nucleotidyltransferase no data 25 89
  Dinoroseobacter shibae DFL-12 Dshi_2997 Polyribonucleotide nucleotidyltransferase (RefSeq) no data 24 82