Homologs of HSERO_RS23400 from Herbaspirillum seropedicae SmR1

DNA processing protein DprA
SEED: Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
KEGG: DNA processing protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS23400 DNA processing protein DprA insig. 100 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS04985 DNA-processing protein DprA insig. 59 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09755 DNA-protecting protein DprA insig. 57 96
o Ralstonia solanacearum UW163 UW163_RS03825 DNA-protecting protein DprA insig. 57 96
o Ralstonia solanacearum GMI1000 RS_RS00340 DNA-protecting protein DprA insig. 58 96
o Ralstonia solanacearum PSI07 RPSI07_RS23610 DNA-protecting protein DprA cofit 57 96
o Cupriavidus basilensis FW507-4G11 RR42_RS20480 DNA processing protein DprA insig. 56 96
o Variovorax sp. OAS795 ABID97_RS01830 DNA-processing protein DprA insig. 53 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2571 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 55 95
o Acidovorax sp. GW101-3H11 Ac3H11_4411 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 53 96
o Dechlorosoma suillum PS Dsui_0819 DNA protecting protein DprA cofit 53 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS00150 DNA-processing protein DprA insig. 50 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02242 DNA protecting protein DprA insig. 49 95
o Paraburkholderia graminis OAS925 ABIE53_000387 DNA processing protein insig. 47 95
o Burkholderia phytofirmans PsJN BPHYT_RS01450 DNA-binding protein insig. 47 92
o Castellaniella sp019104865 MT123 ABCV34_RS14195 DNA-processing protein DprA insig. 49 97
o Variovorax sp. SCN45 GFF5489 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 50 88
o Rhodanobacter denitrificans MT42 LRK55_RS09785 DNA-processing protein DprA cofit 44 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10145 DNA-processing protein DprA sig. 44 97
o Marinobacter adhaerens HP15 HP15_3746 DNA protecting protein DprA insig. 46 88
o Pseudomonas stutzeri RCH2 Psest_0025 DNA protecting protein DprA sig. 51 83
  Kangiella aquimarina DSM 16071 B158DRAFT_0400 DNA protecting protein DprA insig. 46 78
o Rhodanobacter sp. FW510-T8 OKGIIK_13770 dprA DNA-processing protein DprA insig. 45 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13870 DNA-processing protein DprA insig. 51 76
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4746.1 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 45 90
o Pseudomonas sp. S08-1 OH686_12505 DNA protecting protein DprA insig. 47 97
  Pseudomonas fluorescens FW300-N2E3 AO353_10650 DNA processing protein DprA insig. 52 76
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1910 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 45 97
o Pseudomonas fluorescens FW300-N2C3 AO356_11295 DNA processing protein DprA insig. 45 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4125 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 49 81
o Pseudomonas fluorescens GW456-L13 PfGW456L13_648 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 44 96
  Pseudomonas fluorescens SBW25 PFLU_RS00100 DNA-protecting protein DprA cofit 50 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00100 DNA-protecting protein DprA insig. 50 80
  Pseudomonas sp. RS175 PFR28_04659 hypothetical protein insig. 51 80
o Pseudomonas syringae pv. syringae B728a Psyr_0021 DNA protecting protein DprA insig. 45 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0021 DNA protecting protein DprA insig. 45 98
  Shewanella sp. ANA-3 Shewana3_0037 DNA protecting protein DprA (RefSeq) insig. 44 79
  Shewanella oneidensis MR-1 SO0034 DNA processing protein DprA, putative (NCBI ptt file) insig. 44 79
  Klebsiella michiganensis M5al BWI76_RS25665 DNA-processing protein DprA insig. 44 79
o Azospirillum brasilense Sp245 AZOBR_RS15885 DNA processing protein DprA insig. 45 93
o Dickeya dadantii 3937 DDA3937_RS19120 DNA-protecting protein DprA insig. 41 95
o Dickeya dianthicola 67-19 HGI48_RS19210 DNA-protecting protein DprA insig. 41 95
o Dickeya dianthicola ME23 DZA65_RS20335 DNA-protecting protein DprA insig. 41 95
  Pectobacterium carotovorum WPP14 HER17_RS02230 DNA-protecting protein DprA insig. 43 79
o Pseudomonas putida KT2440 PP_0069 putative Rossmann fold nucleotide-binding protein sig. 45 96
  Lysobacter sp. OAE881 ABIE51_RS02235 DNA-processing protein DprA insig. 45 77
  Pantoea sp. MT58 IAI47_02295 DNA-protecting protein DprA insig. 44 77
o Shewanella loihica PV-4 Shew_3734 DNA protecting protein DprA (RefSeq) insig. 41 83
o Enterobacter asburiae PDN3 EX28DRAFT_0042 DNA protecting protein DprA insig. 41 86
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 43 82
  Shewanella amazonensis SB2B Sama_0045 DNA processing protein DprA, putative (RefSeq) insig. 42 78
o Magnetospirillum magneticum AMB-1 AMB_RS03500 DNA-protecting protein DprA cofit 43 93
  Erwinia tracheiphila SCR3 LU632_RS22465 dprA DNA-protecting protein DprA insig. 41 79
o Azospirillum sp. SherDot2 MPMX19_01508 hypothetical protein insig. 41 93
o Escherichia coli ECRC101 MCAODC_08065 dprA DNA-protecting protein DprA insig. 41 87
o Escherichia coli ECRC102 NIAGMN_15305 dprA DNA-protecting protein DprA insig. 41 87
o Escherichia coli ECRC98 JDDGAC_21165 dprA DNA-protecting protein DprA no data 41 87
o Escherichia coli ECOR38 HEPCGN_16365 dprA DNA-protecting protein DprA cofit 41 87
o Escherichia coli BL21 ECD_03136 DNA recombination-mediator A family protein insig. 40 87
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00418 hypothetical protein insig. 40 87
o Escherichia coli BW25113 b4473 smf hypothetical protein (NCBI) insig. 40 87
o Escherichia fergusonii Becca EFB2_00538 hypothetical protein insig. 41 87
o Escherichia coli Nissle 1917 ECOLIN_RS18860 DNA-protecting protein DprA insig. 41 87
o Vibrio cholerae E7946 ATCC 55056 CSW01_00245 DNA-protecting protein DprA insig. 41 95
o Escherichia coli ECRC62 BNILDI_02185 dprA DNA-protecting protein DprA insig. 41 82
  Enterobacter sp. TBS_079 MPMX20_04193 hypothetical protein insig. 44 76
o Escherichia coli ECRC99 KEDOAH_10605 dprA DNA-protecting protein DprA no data 41 87
o Escherichia coli ECOR27 NOLOHH_09335 dprA DNA-protecting protein DprA cofit 41 82
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04240 DNA-processing protein DprA insig. 40 95
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04370 DNA protecting protein DprA insig. 34 94
  Serratia liquefaciens MT49 IAI46_23260 DNA-protecting protein DprA insig. 41 78
  Escherichia coli ECRC101 OKFHMN_17535 dprA DNA-protecting protein DprA insig. 46 67
  Desulfovibrio vulgaris Miyazaki F DvMF_0771 DNA protecting protein DprA (RefSeq) insig. 45 75
o Alteromonas macleodii MIT1002 MIT1002_00022 DNA protecting protein DprA insig. 37 94
o Rhodospirillum rubrum S1H Rru_A3194 SMF protein (NCBI) insig. 42 93
o Caulobacter crescentus NA1000 CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 40 93
o Caulobacter crescentus NA1000 Δfur CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 40 93
  Fusobacterium nucleatum SB010 HUW76_06810 DNA-protecting protein DprA strong 34 76
  Rahnella sp. WP5 EX31_RS15970 DNA-protecting protein DprA cofit 39 78
  Acinetobacter radioresistens SK82 MPMX26_00114 hypothetical protein insig. 44 72
o Bosea sp. OAE506 ABIE41_RS17215 DNA-processing protein DprA insig. 39 95
o Synechococcus elongatus PCC 7942 Synpcc7942_0703 smf DNA processing protein DprA, putative insig. 38 96
o Rhizobium sp. OAE497 ABIE40_RS07365 DNA-processing protein DprA insig. 38 93
o Agrobacterium fabrum C58 Atu1305 DNA processing chain A insig. 36 92
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13955 DNA-processing protein DprA insig. 35 94
o Rhodopseudomonas palustris CGA009 TX73_016135 DNA-processing protein DprA insig. 40 93
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2448 DNA protecting protein DprA insig. 40 89
o Dinoroseobacter shibae DFL-12 Dshi_1138 DNA protecting protein DprA (RefSeq) insig. 40 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS05335 DNA-processing protein DprA insig. 31 94
o Sinorhizobium meliloti 1021 SMc01363 hypothetical protein insig. 37 92
o Phaeobacter inhibens DSM 17395 PGA1_c06230 putative protein Smf insig. 38 94
  Desulfovibrio vulgaris Hildenborough JW710 DVU2069 dprA DNA processing protein DprA, putative (TIGR) insig. 44 78
o Bacteroides thetaiotaomicron VPI-5482 BT3070 Smf protein DNA processing chain A (NCBI ptt file) insig. 32 92
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3854 DNA protecting protein DprA insig. 30 95
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06145 DNA protecting protein DprA insig. 31 92
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11685 DNA-protecting protein DprA insig. 31 92
o Phocaeicola dorei CL03T12C01 ABI39_RS05220 DNA-processing protein DprA insig. 30 92
o Bacteroides stercoris CC31F HMPREF1181_RS01510 DNA-protecting protein DprA insig. 30 93
o Bacteroides ovatus ATCC 8483 BACOVA_02721 DNA protecting protein DprA insig. 28 95
  Mycobacterium tuberculosis H37Rv Rv2896c Conserved hypothetical protein insig. 39 69