Homologs of HSERO_RS00695 from Herbaspirillum seropedicae SmR1

30S ribosomal protein S4
SEED: SSU ribosomal protein S4p (S9e)
KEGG: small subunit ribosomal protein S4

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS00695 30S ribosomal protein S4 no data 100 100
o Ralstonia solanacearum PSI07 RPSI07_RS10175 30S ribosomal protein S4 no data 85 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS07065 30S ribosomal protein S4 no data 85 100
o Ralstonia solanacearum UW163 UW163_RS06550 30S ribosomal protein S4 no data 85 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS02715 30S ribosomal protein S4 no data 85 100
o Ralstonia solanacearum GMI1000 RS_RS15005 30S ribosomal protein S4 no data 84 100
o Cupriavidus basilensis FW507-4G11 RR42_RS19130 30S ribosomal protein S4 no data 85 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS28140 30S ribosomal protein S4 no data 86 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05594 SSU ribosomal protein S4P no data 86 100
o Paraburkholderia graminis OAS925 ABIE53_003761 small subunit ribosomal protein S4 no data 86 100
o Burkholderia phytofirmans PsJN BPHYT_RS17990 30S ribosomal protein S4 no data 85 100
o Castellaniella sp019104865 MT123 ABCV34_RS11305 30S ribosomal protein S4 no data 77 100
o Variovorax sp. OAS795 ABID97_RS01475 30S ribosomal protein S4 no data 81 100
o Variovorax sp. SCN45 GFF5569 SSU ribosomal protein S4p (S9e) @ SSU ribosomal protein S4p (S9e), zinc-independent no data 81 100
o Acidovorax sp. GW101-3H11 Ac3H11_812 SSU ribosomal protein S4p (S9e) no data 80 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2830 SSU ribosomal protein S4p (S9e) no data 79 100
o Alteromonas macleodii MIT1002 MIT1002_03586 30S ribosomal protein S4 no data 71 100
o Klebsiella michiganensis M5al BWI76_RS25720 30S ribosomal protein S4 no data 70 100
o Enterobacter asburiae PDN3 EX28DRAFT_0031 ribosomal protein S4, bacterial/organelle type no data 70 100
o Enterobacter sp. TBS_079 MPMX20_04204 30S ribosomal protein S4 no data 70 100
o Escherichia coli BL21 ECD_03147 30S ribosomal subunit protein S4 no data 69 100
o Escherichia fergusonii Becca EFB2_00527 30S ribosomal protein S4 no data 69 100
o Escherichia coli ECOR27 NOLOHH_09280 rpsD 30S ribosomal protein S4 no data 69 100
o Escherichia coli ECOR38 HEPCGN_16310 rpsD 30S ribosomal protein S4 no data 69 100
o Escherichia coli ECRC101 OKFHMN_17480 rpsD 30S ribosomal protein S4 no data 69 100
o Escherichia coli ECRC101 MCAODC_08010 rpsD 30S ribosomal protein S4 no data 69 100
o Escherichia coli ECRC102 NIAGMN_15250 rpsD 30S ribosomal protein S4 no data 69 100
o Escherichia coli ECRC62 BNILDI_02240 rpsD 30S ribosomal protein S4 no data 69 100
o Escherichia coli ECRC98 JDDGAC_21110 rpsD 30S ribosomal protein S4 no data 69 100
o Escherichia coli ECRC99 KEDOAH_10660 rpsD 30S ribosomal protein S4 no data 69 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00407 30S ribosomal protein S4 no data 69 100
o Escherichia coli Nissle 1917 ECOLIN_RS18915 30S ribosomal protein S4 no data 69 100
o Escherichia coli BW25113 b3296 rpsD 30S ribosomal protein S4 (NCBI) no data 69 100
o Pseudomonas sp. S08-1 OH686_15475 ribosomal protein S4 no data 69 100
o Pantoea sp. MT58 IAI47_02240 30S ribosomal protein S4 no data 68 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_13020 30S ribosomal protein S4 no data 68 100
o Serratia liquefaciens MT49 IAI46_23315 30S ribosomal protein S4 no data 67 100
o Dickeya dadantii 3937 DDA3937_RS19165 30S ribosomal protein S4 no data 68 100
o Dickeya dianthicola 67-19 HGI48_RS19265 30S ribosomal protein S4 no data 68 100
o Dickeya dianthicola ME23 DZA65_RS20385 30S ribosomal protein S4 no data 68 100
o Pseudomonas stutzeri RCH2 Psest_3581 ribosomal protein S4, bacterial/organelle type no data 68 100
o Erwinia tracheiphila SCR3 LU632_RS22535 rpsD 30S ribosomal protein S4 no data 68 100
o Rahnella sp. WP5 EX31_RS16025 30S ribosomal protein S4 no data 67 100
o Pectobacterium carotovorum WPP14 HER17_RS02185 30S ribosomal protein S4 no data 67 100
o Shewanella amazonensis SB2B Sama_0237 rpsD 30S ribosomal protein S4 (RefSeq) no data 67 100
o Shewanella loihica PV-4 Shew_0182 rpsD 30S ribosomal protein S4 (RefSeq) no data 67 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2383 SSU ribosomal protein S4p (S9e) no data 68 98
o Pseudomonas fluorescens SBW25 PFLU_RS27050 30S ribosomal protein S4 no data 67 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27050 30S ribosomal protein S4 no data 67 100
o Pseudomonas sp. RS175 PFR28_03979 30S ribosomal protein S4 no data 67 100
o Pseudomonas simiae WCS417 PS417_25420 30S ribosomal protein S4 no data 67 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1278 SSU ribosomal protein S4p (S9e) no data 67 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2606 SSU ribosomal protein S4p (S9e) no data 67 100
o Pseudomonas fluorescens FW300-N2C3 AO356_14760 30S ribosomal protein S4 no data 67 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4883 SSU ribosomal protein S4p (S9e) no data 67 100
o Pseudomonas fluorescens FW300-N2E3 AO353_06880 30S ribosomal protein S4 no data 66 100
o Shewanella sp. ANA-3 Shewana3_0223 rpsD 30S ribosomal protein S4 (RefSeq) no data 66 100
o Shewanella oneidensis MR-1 SO0255 rpsD ribosomal protein S4 (NCBI ptt file) no data 66 100
o Pseudomonas syringae pv. syringae B728a Psyr_4525 SSU ribosomal protein S4P no data 66 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4525 SSU ribosomal protein S4P no data 66 100
o Acinetobacter radioresistens SK82 MPMX26_02697 30S ribosomal protein S4 no data 69 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4117.1 SSU ribosomal protein S4p (S9e) no data 63 100
o Pseudomonas putida KT2440 PP_0478 30S ribosomal protein S4 no data 66 100
o Lysobacter sp. OAE881 ABIE51_RS05955 30S ribosomal protein S4 no data 64 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1900 ribosomal protein S4, bacterial/organelle type no data 65 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS21790 30S ribosomal protein S4 no data 63 100
o Rhodanobacter denitrificans MT42 LRK55_RS03210 30S ribosomal protein S4 no data 64 100
o Rhodanobacter sp. FW510-T8 OKGIIK_10350 rpsD 30S ribosomal protein S4 no data 64 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03460 30S ribosomal protein S4 no data 63 100
o Dechlorosoma suillum PS Dsui_0334 ribosomal protein S4, bacterial/organelle type no data 55 100
o Marinobacter adhaerens HP15 HP15_403 30S ribosomal protein S4 no data 65 81
o Desulfovibrio vulgaris Miyazaki F DvMF_0104 rpsD 30S ribosomal protein S4 (RefSeq) no data 52 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16855 30S ribosomal protein S4 no data 53 100
o Desulfovibrio vulgaris Hildenborough JW710 DVU1328 rpsD ribosomal protein S4 (TIGR) no data 50 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19475 30S ribosomal protein S4 no data 51 100
o Bacteroides stercoris CC31F HMPREF1181_RS00400 30S ribosomal protein S4 no data 50 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16795 30S ribosomal protein S4 no data 49 100
o Bacteroides thetaiotaomicron VPI-5482 BT2702 30S ribosomal protein S4 (NCBI ptt file) no data 49 100
o Bacteroides ovatus ATCC 8483 BACOVA_01002 ribosomal protein S4 no data 49 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0229 ribosomal protein S4, bacterial/organelle type no data 49 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00580 30S ribosomal protein S4 no data 49 100
o Phocaeicola dorei CL03T12C01 ABI39_RS03605 30S ribosomal protein S4 no data 47 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09220 30S ribosomal protein S4 no data 47 100
o Caulobacter crescentus NA1000 CCNA_02596 SSU ribosomal protein S4P no data 47 96
o Caulobacter crescentus NA1000 Δfur CCNA_02596 SSU ribosomal protein S4P no data 47 96
o Mycobacterium tuberculosis H37Rv Rv3458c 30S ribosomal protein S4 RpsD no data 45 100
o Rhizobium sp. OAE497 ABIE40_RS10240 30S ribosomal protein S4 no data 47 97
o Agrobacterium fabrum C58 Atu1860 30S ribosomal protein S4 no data 45 97
o Bosea sp. OAE506 ABIE41_RS13530 30S ribosomal protein S4 no data 44 97
o Phaeobacter inhibens DSM 17395 PGA1_c25280 30S ribosomal protein S4 no data 45 97
o Sinorhizobium meliloti 1021 SMc00485 30S ribosomal protein S4 no data 45 97
o Dinoroseobacter shibae DFL-12 Dshi_2948 RNA-binding S4 domain protein (RefSeq) no data 44 97
o Synechococcus elongatus PCC 7942 Synpcc7942_1487 rpsD 30S ribosomal protein S4 no data 43 100
o Fusobacterium nucleatum SB010 HUW76_03815 30S ribosomal protein S4 no data 41 100
o Magnetospirillum magneticum AMB-1 AMB_RS10745 30S ribosomal protein S4 no data 43 100
o Azospirillum sp. SherDot2 MPMX19_01959 30S ribosomal protein S4 no data 45 97
o Azospirillum brasilense Sp245 AZOBR_RS04290 30S ribosomal protein S4 no data 45 97
o Rhodopseudomonas palustris CGA009 TX73_008160 30S ribosomal protein S4 no data 43 97
o Rhodospirillum rubrum S1H Rru_A0701 Ribosomal protein S4 (NCBI) no data 40 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1983 ribosomal protein S4, bacterial/organelle type no data 41 97