Homologs of HMPREF1078_RS13015 from Parabacteroides merdae CL09T00C40

Holliday junction branch migration protein RuvA
SEED: Holliday junction DNA helicase RuvA
KEGG: holliday junction DNA helicase RuvA

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13015 Holliday junction branch migration protein RuvA strong 100 100
o Bacteroides stercoris CC31F HMPREF1181_RS07915 Holliday junction branch migration protein RuvA sig. 62 100
o Bacteroides thetaiotaomicron VPI-5482 BT1978 Holliday junction DNA helicase ruvA (NCBI ptt file) no data 59 100
o Bacteroides ovatus ATCC 8483 BACOVA_00691 Holliday junction DNA helicase RuvA no data 58 100
o Phocaeicola dorei CL03T12C01 ABI39_RS08200 Holliday junction branch migration protein RuvA no data 58 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00595 Holliday junction branch migration protein RuvA strong 58 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18995 Holliday junction branch migration protein RuvA strong 45 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18310 Holliday junction branch migration protein RuvA no data 42 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4082 Holliday junction DNA helicase, RuvA subunit insig. 42 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14545 Holliday junction branch migration protein RuvA no data 42 99
o Pseudomonas putida KT2440 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA strong 38 99
o Pseudomonas sp. S08-1 OH686_19130 Holliday junction DNA helicase RuvA no data 39 99
o Pseudomonas syringae pv. syringae B728a Psyr_1409 Holliday junction DNA helicase subunit RuvA no data 35 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1409 Holliday junction DNA helicase subunit RuvA sig. 35 99
o Pseudomonas sp. RS175 PFR28_03413 Holliday junction ATP-dependent DNA helicase RuvA strong 37 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_638 Holliday junction DNA helicase RuvA no data 36 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5536 Holliday junction DNA helicase RuvA insig. 36 99
o Pseudomonas stutzeri RCH2 Psest_1496 Holliday junction DNA helicase, RuvA subunit sig. 37 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1852 Holliday junction DNA helicase RuvA strong 37 99
o Pseudomonas simiae WCS417 PS417_22450 ATP-dependent DNA helicase RuvA insig. 38 99
o Pseudomonas fluorescens FW300-N2C3 AO356_18020 ATP-dependent DNA helicase RuvA strong 36 99
o Pseudomonas fluorescens SBW25 PFLU_RS24090 Holliday junction branch migration protein RuvA strong 37 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24090 Holliday junction branch migration protein RuvA strong 37 99
o Enterobacter sp. TBS_079 MPMX20_02767 Holliday junction ATP-dependent DNA helicase RuvA strong 37 99
o Marinobacter adhaerens HP15 HP15_2041 Holliday junction ATP-dependent DNA helicase RuvA no data 34 99
o Pseudomonas fluorescens FW300-N2E3 AO353_03585 ATP-dependent DNA helicase RuvA strong 36 99
o Enterobacter asburiae PDN3 EX28DRAFT_0695 Holliday junction DNA helicase subunit RuvA no data 37 99
o Klebsiella michiganensis M5al BWI76_RS18150 Holliday junction branch migration protein RuvA no data 36 99
o Erwinia tracheiphila SCR3 LU632_RS13415 ruvA Holliday junction branch migration protein RuvA no data 37 99
o Pantoea sp. MT58 IAI47_08445 Holliday junction branch migration protein RuvA insig. 37 99
o Escherichia fergusonii Becca EFB2_02081 Holliday junction ATP-dependent DNA helicase RuvA no data 35 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01867 Holliday junction ATP-dependent DNA helicase RuvA no data 35 99
o Escherichia coli Nissle 1917 ECOLIN_RS10365 Holliday junction branch migration protein RuvA no data 35 99
o Escherichia coli BW25113 b1861 ruvA Holliday junction DNA helicase motor protein (NCBI) strong 35 99
o Alteromonas macleodii MIT1002 MIT1002_01332 Holliday junction ATP-dependent DNA helicase RuvA no data 34 99
o Escherichia coli BL21 ECD_01832 component of RuvABC resolvasome, regulatory subunit no data 35 99
o Escherichia coli ECOR27 NOLOHH_16725 ruvA Holliday junction branch migration protein RuvA no data 35 99
o Escherichia coli ECOR38 HEPCGN_04690 ruvA Holliday junction branch migration protein RuvA no data 35 99
o Escherichia coli ECRC101 OKFHMN_26280 ruvA Holliday junction branch migration protein RuvA no data 35 99
o Escherichia coli ECRC101 MCAODC_19125 ruvA Holliday junction branch migration protein RuvA no data 35 99
o Escherichia coli ECRC102 NIAGMN_01780 ruvA Holliday junction branch migration protein RuvA no data 35 99
o Escherichia coli ECRC62 BNILDI_15515 ruvA Holliday junction branch migration protein RuvA no data 35 99
o Escherichia coli ECRC98 JDDGAC_00855 ruvA Holliday junction branch migration protein RuvA no data 35 99
o Escherichia coli ECRC99 KEDOAH_01825 ruvA Holliday junction branch migration protein RuvA no data 35 99
o Dechlorosoma suillum PS Dsui_0485 Holliday junction DNA helicase, RuvA subunit no data 36 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1640 Holliday junction DNA helicase RuvA no data 35 99
o Rahnella sp. WP5 EX31_RS11675 Holliday junction branch migration protein RuvA sig. 35 99
o Mycobacterium tuberculosis H37Rv Rv2593c Probable holliday junction DNA helicase RuvA no data 35 100
o Shewanella amazonensis SB2B Sama_1840 ruvA Holliday junction DNA helicase RuvA (RefSeq) no data 34 99
o Shewanella oneidensis MR-1 SO2430 ruvA Holliday junction DNA helicase RuvA (NCBI ptt file) sig. 33 99
o Shewanella sp. ANA-3 Shewana3_1956 ruvA Holliday junction DNA helicase RuvA (RefSeq) insig. 33 99
o Desulfovibrio vulgaris Miyazaki F DvMF_3204 Holliday junction DNA helicase RuvA (RefSeq) strong 37 94
o Desulfovibrio vulgaris Hildenborough JW710 DVU2256 ruvA Holliday junction DNA helicase RuvA (TIGR) insig. 37 94
o Castellaniella sp019104865 MT123 ABCV34_RS07980 Holliday junction branch migration protein RuvA insig. 35 100
o Shewanella loihica PV-4 Shew_2076 Holliday junction DNA helicase RuvA (RefSeq) no data 32 99
o Ralstonia solanacearum GMI1000 RS_RS02490 Holliday junction branch migration protein RuvA no data 36 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_09245 Holliday junction branch migration protein RuvA strong 31 99
o Burkholderia phytofirmans PsJN BPHYT_RS16615 holliday junction ATP-dependent DNA helicase RuvA no data 36 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1125 Holliday junction DNA helicase subunit RuvA strong 34 100
o Dickeya dadantii 3937 DDA3937_RS10080 Holliday junction branch migration protein RuvA no data 34 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11670 Holliday junction branch migration protein RuvA no data 37 100
o Ralstonia solanacearum UW163 UW163_RS01915 Holliday junction branch migration protein RuvA no data 37 100
o Magnetospirillum magneticum AMB-1 AMB_RS16255 Holliday junction branch migration protein RuvA no data 37 89
o Ralstonia sp. UNC404CL21Col ABZR87_RS07625 Holliday junction branch migration protein RuvA strong 37 100
o Ralstonia solanacearum PSI07 RPSI07_RS21550 Holliday junction branch migration protein RuvA no data 35 100
o Pectobacterium carotovorum WPP14 HER17_RS11845 Holliday junction branch migration protein RuvA no data 33 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS10840 Holliday junction branch migration protein RuvA strong 33 99
o Dickeya dianthicola 67-19 HGI48_RS10110 Holliday junction branch migration protein RuvA no data 35 73
o Dickeya dianthicola ME23 DZA65_RS10525 Holliday junction branch migration protein RuvA no data 35 73
o Acinetobacter radioresistens SK82 MPMX26_02185 Holliday junction ATP-dependent DNA helicase RuvA strong 33 88
o Lysobacter sp. OAE881 ABIE51_RS05045 Holliday junction branch migration protein RuvA insig. 34 99
o Paraburkholderia graminis OAS925 ABIE53_003494 Holliday junction DNA helicase RuvA sig. 36 100
o Serratia liquefaciens MT49 IAI46_14625 Holliday junction branch migration protein RuvA no data 37 69
o Variovorax sp. OAS795 ABID97_RS24920 Holliday junction branch migration protein RuvA insig. 36 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1666 Holliday junction DNA helicase RuvA sig. 35 100
o Cupriavidus basilensis FW507-4G11 RR42_RS02705 Holliday junction DNA helicase RuvA insig. 37 100
o Bifidobacterium breve UCC2003 BBR_RS15655 Holliday junction branch migration protein RuvA strong 30 88
o Rhodanobacter denitrificans MT42 LRK55_RS04690 Holliday junction branch migration protein RuvA no data 32 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04910 Holliday junction branch migration protein RuvA no data 32 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS26795 Holliday junction branch migration protein RuvA no data 35 100
o Variovorax sp. SCN45 GFF2073 Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) strong 35 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04254 Holliday junction DNA helicase subunit RuvA no data 39 62
o Acidovorax sp. GW101-3H11 Ac3H11_4683 Holliday junction DNA helicase RuvA no data 40 62
o Herbaspirillum seropedicae SmR1 HSERO_RS02090 Holliday junction DNA helicase RuvA insig. 37 100
o Rhodanobacter sp. FW510-T8 OKGIIK_01840 ruvA Holliday junction branch migration protein RuvA no data 31 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1436.1 Holliday junction DNA helicase RuvA insig. 32 84
o Sinorhizobium meliloti 1021 SMc03966 Holliday junction DNA helicase RuvA no data 37 69
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15860 Holliday junction branch migration protein RuvA no data 32 100
o Azospirillum brasilense Sp245 AZOBR_RS09045 Holliday junction DNA helicase RuvA no data 31 88
o Rhizobium sp. OAE497 ABIE40_RS15745 Holliday junction branch migration protein RuvA strong 33 85
o Rhodopseudomonas palustris CGA009 TX73_005655 Holliday junction branch migration protein RuvA no data 32 84
o Synechococcus elongatus PCC 7942 Synpcc7942_2298 ruvA Holliday junction DNA helicase motor protein no data 31 100
o Azospirillum sp. SherDot2 MPMX19_00697 Holliday junction ATP-dependent DNA helicase RuvA no data 32 88
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0820 Holliday junction DNA helicase subunit RuvA no data 31 99
o Agrobacterium fabrum C58 Atu3723 Holliday junction DNA helicase RuvA no data 33 85
o Fusobacterium nucleatum SB010 HUW76_06655 Holliday junction branch migration protein RuvA cofit 31 99
o Phaeobacter inhibens DSM 17395 PGA1_c05860 holliday junction ATP-dependent DNA helicase RuvA sig. 35 76
o Bosea sp. OAE506 ABIE41_RS09475 Holliday junction branch migration protein RuvA no data 34 84
o Rhodospirillum rubrum S1H Rru_A1088 DNA recombination protein RuvA (NCBI) no data 32 100
o Caulobacter crescentus NA1000 CCNA_03345 Holliday junction DNA helicase RuvA sig. 32 83