| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas stutzeri RCH2 | Psest_0748 | | RNA polymerase-binding protein DksA | no data | 100 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1993 | | C4-type zinc finger protein, DksA/TraR family | insig. | 77 | 99 |
| o | Pseudomonas sp. BP01 | JOY50_RS14115 | dksA | RNA polymerase-binding protein DksA | no data | 72 | 99 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS29955 | | RNA polymerase-binding protein DksA | insig. | 72 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS29955 | | RNA polymerase-binding protein DksA | insig. | 72 | 100 |
| o | Pseudomonas sp. S08-1 | OH686_23510 | | RNA polymerase-binding protein DksA | insig. | 69 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS25985 | dksA;go_function=enzyme | RNA polymerase-binding protein DksA | sig. | 72 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_25730 | | RNA polymerase-binding protein DksA | no data | 72 | 99 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS58410 | dksA;go_function=enzyme | RNA polymerase-binding protein DksA | sig. | 72 | 99 |
| o | Pseudomonas segetis P6 | ACVTMO_RS10135 | dksA | RNA polymerase-binding protein DksA | insig. | 70 | 97 |
| o | Pseudomonas simiae WCS417 | PS417_28290 | | molecular chaperone DnaK | no data | 74 | 88 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_3262 | | dnaK suppressor protein, putative | sig. | 46 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3262 | | dnaK suppressor protein, putative | no data | 46 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS19355 | | TraR/DksA C4-type zinc finger protein | insig. | 46 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_02414 | | RNA polymerase-binding transcription factor DksA | sig. | 45 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_21400 | | conjugal transfer protein TraR | strong | 45 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_23215 | | conjugal transfer protein TraR | strong | 45 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_525 | | C4-type zinc finger protein, DksA/TraR family | strong | 45 | 100 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS12635 | | conjugal transfer protein TraR | insig. | 44 | 100 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS12635 | | conjugal transfer protein TraR | sig. | 44 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02662 | | RNA polymerase-binding transcription factor DksA | cofit | 44 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS14635 | | TraR/DksA C4-type zinc finger protein | no data | 44 | 100 |
| | Pseudomonas simiae WCS417 | PS417_11900 | | conjugal transfer protein TraR | strong | 44 | 100 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4288 | | C4-type zinc finger protein, DksA/TraR family | no data | 43 | 100 |
| o | Pseudomonas sp. DMC3 | GFF1724 | | RNA polymerase-binding transcription factor DksA | cofit | 43 | 100 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS13420 | | RNA polymerase-binding protein DksA | no data | 48 | 96 |
| o | Pseudomonas putida KT2440 | PP_2220 | | C4-type zinc finger protein, DksA/TraR family | sig. | 44 | 99 |
| | Pseudomonas sp. BP01 | JOY50_RS12615 | | TraR/DksA C4-type zinc finger protein | insig. | 43 | 99 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS23720 | | RNA polymerase-binding protein DksA | strong | 47 | 96 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09645 | | RNA polymerase-binding protein DksA | strong | 46 | 96 |
| o | Ralstonia solanacearum UW163 | UW163_RS03935 | | RNA polymerase-binding protein DksA | insig. | 46 | 96 |
| o | Ralstonia solanacearum GMI1000 | RS_RS00230 | | RNA polymerase-binding protein DksA | cofit | 46 | 96 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2002 | | C4-type zinc finger protein, DksA/TraR family | insig. | 48 | 96 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS00340 | | RNA polymerase-binding protein DksA | no data | 47 | 96 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS05100 | | RNA polymerase-binding protein DksA | strong | 44 | 96 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS00840 | | molecular chaperone DnaK | no data | 48 | 96 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS01030 | | molecular chaperone DnaK | no data | 47 | 96 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS01640 | | molecular chaperone DnaK | no data | 46 | 96 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02205 | | transcriptional regulator, TraR/DksA family | insig. | 46 | 96 |
| o | Paraburkholderia graminis OAS925 | ABIE53_000423 | | DnaK suppressor protein | strong | 46 | 96 |
| | Variovorax sp. OAS795 | ABID97_RS06170 | | RNA polymerase-binding protein DksA | no data | 48 | 96 |
| | Variovorax sp. SCN45 | GFF4486 | | DksA family protein PA5536 (no Zn-finger) | no data | 47 | 96 |
| o | Serratia liquefaciens MT49 | IAI46_09985 | | RNA polymerase-binding protein DksA | insig. | 49 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5427 | | C4-type zinc finger protein, DksA/TraR family | insig. | 39 | 97 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF550 | | C4-type zinc finger protein, DksA/TraR family | sig. | 44 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS10345 | | RNA polymerase-binding protein DksA | strong | 45 | 96 |
| | Sinorhizobium meliloti 1021 | SMc00469 | | DnaK suppressor protein | no data | 48 | 90 |
| | Agrobacterium fabrum C58 | Atu1359 | | dnaK deletion suppressor protein | strong | 48 | 89 |
| | Azospirillum brasilense Sp245 | AZOBR_RS11245 | | molecular chaperone DnaK | no data | 46 | 90 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS19350 | | RNA polymerase-binding protein DksA | no data | 43 | 99 |
| | Xanthobacter sp. DMC5 | GFF1254 | | RNA polymerase-binding transcription factor DksA | no data | 45 | 88 |
| | Azospirillum sp. SherDot2 | MPMX19_01492 | | RNA polymerase-binding transcription factor DksA | insig. | 44 | 90 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1884 | | transcriptional regulator, TraR/DksA family (RefSeq) | no data | 46 | 90 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c11040 | | dnaK suppressor protein DksA | strong | 43 | 90 |
| | Rhodopseudomonas palustris CGA009 | TX73_020255 | | RNA polymerase-binding protein DksA | strong | 43 | 90 |
| | Caulobacter crescentus NA1000 | CCNA_02663 | | DnaK suppressor protein DksA | strong | 43 | 82 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02663 | | DnaK suppressor protein DksA | cofit | 43 | 82 |
| | Rhodospirillum rubrum S1H | Rru_A2847 | | Transcriptional regulators, TraR/DksA family (NCBI) | cofit | 43 | 90 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS08530 | | RNA polymerase-binding protein DksA | strong | 44 | 83 |
| | Dechlorosoma suillum PS | Dsui_2717 | | RNA polymerase-binding protein DksA | strong | 40 | 92 |
| | Methylophilus sp. DMC18 | GFF2238 | | RNA polymerase-binding transcription factor DksA | no data | 42 | 88 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0274 | | transcriptional regulator, TraR/DksA family | strong | 41 | 92 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_16095 | | molecular chaperone DnaK | strong | 40 | 92 |
| | Marinobacter adhaerens HP15 | HP15_332 | | transcriptional regulator, TraR/DksA family | no data | 39 | 88 |
| | Sphingobium sp. HT1-2 | GFF2254 | | DksA family protein PA5536 (no Zn-finger) | strong | 42 | 90 |
| | Bosea sp. OAE506 | ABIE41_RS13460 | | RNA polymerase-binding protein DksA | strong | 41 | 88 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS02195 | | RNA polymerase-binding protein DksA | no data | 41 | 90 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS02440 | | RNA polymerase-binding protein DksA | strong | 41 | 90 |
| | Pseudomonas sp. RS175 | PFR28_03714 | | RNA polymerase-binding transcription factor DksA | strong | 40 | 92 |
| | Pseudomonas sp. DMC3 | GFF4034 | | RNA polymerase-binding transcription factor DksA | strong | 39 | 92 |
| | Pseudomonas stutzeri RCH2 | Psest_1003 | | RNA polymerase-binding protein DksA | no data | 40 | 88 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS07505 | | RNA polymerase-binding protein DksA | no data | 41 | 88 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2862 | | C4-type zinc finger protein, DksA/TraR family | no data | 39 | 88 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_09500 | dksA | RNA polymerase-binding protein DksA | sig. | 42 | 88 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04926 | | RNA polymerase-binding transcription factor DksA | strong | 40 | 88 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS09350 | dksA;go_function=enzyme | RNA polymerase-binding protein DksA | strong | 40 | 88 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_30000 | | RNA polymerase-binding protein DksA | strong | 40 | 88 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS52680 | dksA;go_function=enzyme | RNA polymerase-binding protein DksA | strong | 40 | 88 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS08750 | | RNA polymerase-binding protein DksA | no data | 41 | 88 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS25715 | | RNA polymerase-binding protein DksA | strong | 39 | 88 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS25715 | | RNA polymerase-binding protein DksA | strong | 39 | 88 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5160 | | C4-type zinc finger protein, DksA/TraR family | strong | 41 | 86 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_14420 | | molecular chaperone DnaK | strong | 37 | 92 |
| | Pseudomonas orientalis W4I3 | QF045_RS26135 | | RNA polymerase-binding protein DksA | cofit | 37 | 92 |
| | Pseudomonas simiae WCS417 | PS417_23875 | | molecular chaperone DnaK | no data | 37 | 92 |
| | Pseudomonas putida KT2440 | PP_4693 | | RNA polymerase-binding transcription factor DksA | strong | 39 | 88 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0835 | | transcriptional regulator, TraR/DksA family | strong | 39 | 88 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0835 | | transcriptional regulator, TraR/DksA family | strong | 39 | 88 |
| | Pseudomonas sp. S08-1 | OH686_17280 | | RNA polymerase-binding protein DksA | no data | 38 | 88 |
| | Pseudomonas sp. SVBP6 | COO64_RS15070 | dksA | RNA polymerase-binding protein DksA | cofit | 40 | 88 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2150 | dksA | dnaK suppressor protein, putative (TIGR) | sig. | 40 | 80 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2307.1 | | C4-type zinc finger protein, DksA/TraR family | no data | 38 | 90 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1528 | | C4-type zinc finger protein, DksA/TraR family | insig. | 36 | 92 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0008 | | transcriptional regulator, TraR/DksA family (RefSeq) | no data | 46 | 60 |
| | Pseudomonas segetis P6 | ACVTMO_RS06235 | dksA | RNA polymerase-binding protein DksA | no data | 38 | 88 |
| | Pseudomonas sp. BP01 | JOY50_RS27695 | dksA | RNA polymerase-binding protein DksA | cofit | 38 | 88 |
| | Lysobacter sp. OAE881 | ABIE51_RS13450 | | RNA polymerase-binding protein DksA | no data | 38 | 89 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0056 | | transcriptional regulator, TraR/DksA family | strong | 37 | 91 |
| | Escherichia coli BL21 | ECD_00144 | | transcriptional regulator of rRNA transcription; DnaK suppressor protein | no data | 36 | 90 |
| | Escherichia fergusonii Becca | EFB2_03899 | | RNA polymerase-binding transcription factor DksA | strong | 36 | 90 |
| | Escherichia coli ECOR27 | NOLOHH_02690 | dksA | RNA polymerase-binding protein DksA | strong | 36 | 90 |
| | Escherichia coli ECOR38 | HEPCGN_08295 | dksA | RNA polymerase-binding protein DksA | strong | 36 | 90 |
| | Escherichia coli ECRC100 | OKFHMN_10345 | dksA | RNA polymerase-binding protein DksA | strong | 36 | 90 |
| | Escherichia coli ECRC101 | MCAODC_00860 | dksA | RNA polymerase-binding protein DksA | strong | 36 | 90 |
| | Escherichia coli ECRC102 | NIAGMN_08195 | dksA | RNA polymerase-binding protein DksA | strong | 36 | 90 |
| | Escherichia coli ECRC62 | BNILDI_08980 | dksA | RNA polymerase-binding protein DksA | strong | 36 | 90 |
| | Escherichia coli ECRC98 | JDDGAC_13940 | dksA | RNA polymerase-binding protein DksA | strong | 36 | 90 |
| | Escherichia coli ECRC99 | KEDOAH_17810 | dksA | RNA polymerase-binding protein DksA | no data | 36 | 90 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03517 | | RNA polymerase-binding transcription factor DksA | sig. | 36 | 90 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS00800 | | RNA polymerase-binding protein DksA | no data | 36 | 90 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS00815 | | RNA polymerase-binding protein DksA | no data | 36 | 90 |
| | Escherichia coli BW25113 | b0145 | dksA | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | strong | 36 | 90 |
| | Pantoea sp. MT58 | IAI47_15635 | | RNA polymerase-binding protein DksA | strong | 35 | 91 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS13365 | | RNA polymerase-binding protein DksA | strong | 35 | 91 |
| | Erwinia amylovora T8 | OLJFJH_00765 | | RNA polymerase-binding protein DksA | no data | 35 | 90 |
| | Dickeya dadantii 3937 | DDA3937_RS15935 | | RNA polymerase-binding protein DksA | no data | 37 | 90 |
| | Dickeya dianthicola 67-19 | HGI48_RS16050 | | RNA polymerase-binding protein DksA | insig. | 37 | 90 |
| | Dickeya dianthicola ME23 | DZA65_RS17135 | | RNA polymerase-binding protein DksA | no data | 37 | 90 |
| | Pectobacterium carotovorum WPP14 | HER17_RS05580 | | RNA polymerase-binding protein DksA | strong | 37 | 90 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_13270 | | RNA polymerase-binding protein DksA | no data | 35 | 90 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS11715 | dksA;inference=COORDINATES | RNA polymerase-binding protein DksA | strong | 35 | 90 |
| | Rahnella sp. WP5 | EX31_RS03250 | | RNA polymerase-binding protein DksA | strong | 35 | 90 |
| | Serratia liquefaciens MT49 | IAI46_21210 | | RNA polymerase-binding protein DksA | strong | 35 | 90 |
| | Shewanella loihica PV-4 | Shew_3129 | | TraR/DksA family transcriptional regulator (RefSeq) | no data | 34 | 90 |
| | Klebsiella michiganensis M5al | BWI76_RS05015 | | transcriptional regulator | strong | 35 | 91 |
| | Acinetobacter baumannii LAC-4 | RR41_RS17730 | | RNA polymerase-binding protein DksA | no data | 35 | 93 |
| | Shewanella amazonensis SB2B | Sama_0780 | | TraR/DksA family transcriptional regulator (RefSeq) | strong | 34 | 90 |
| | Shewanella oneidensis MR-1 | SO0874 | dksA | DnaK suppressor protein (NCBI ptt file) | no data | 34 | 90 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3734 | | transcriptional regulator, TraR/DksA family | no data | 34 | 90 |
| | Enterobacter sp. TBS_079 | MPMX20_00831 | | RNA polymerase-binding transcription factor DksA | strong | 34 | 90 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_15060 | dksA | RNA polymerase-binding protein DksA | no data | 34 | 90 |
| | Erwinia tracheiphila SCR3 | LU632_RS20080 | dksA | RNA polymerase-binding protein DksA | no data | 34 | 90 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF87 | | C4-type zinc finger protein, DksA/TraR family | insig. | 34 | 90 |
| | Shewanella sp. ANA-3 | Shewana3_3404 | | TraR/DksA family transcriptional regulator (RefSeq) | sig. | 34 | 90 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_03155 | | RNA polymerase-binding transcription factor DksA | cofit | 34 | 90 |
| | Acinetobacter radioresistens SK82 | MPMX26_00177 | | RNA polymerase-binding transcription factor DksA | strong | 33 | 93 |
| | Alteromonas macleodii MIT1002 | MIT1002_03690 | | DnaK suppressor protein | strong | 35 | 88 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15020 | | TraR/DksA C4-type zinc finger protein | insig. | 33 | 76 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS17490 | | molecular chaperone DnaK | no data | 40 | 50 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2168 | | transcriptional regulator, TraR/DksA family (RefSeq) | insig. | 30 | 72 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS19205 | | TraR/DksA C4-type zinc finger protein | strong | 42 | 50 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS14970 | | TraR/DksA C4-type zinc finger protein | no data | 31 | 75 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08290 | | TraR/DksA C4-type zinc finger protein | insig. | 37 | 51 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0878 | | dnaK suppressor protein, putative (TIGR) | insig. | 42 | 41 |
| | Cellulophaga baltica 18 | M666_RS03755 | | TraR/DksA C4-type zinc finger protein | sig. | 33 | 58 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02235 | | conjugal transfer protein TraR | insig. | 35 | 75 |
| | Ralstonia solanacearum UW163 | UW163_RS15545 | | conjugal transfer protein TraR | insig. | 35 | 75 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1936 | | transcriptional regulator, TraR/DksA family | insig. | 35 | 47 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0717 | | DnaK suppressor protein | strong | 43 | 37 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0812 | | transcriptional regulator, TraR/DksA family (RefSeq) | insig. | 31 | 71 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02541 | | putative RNA polymerase-binding protein DksA | strong | 33 | 57 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS14620 | | TraR/DksA C4-type zinc finger protein | strong | 33 | 57 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0807 | | DnaK suppressor protein, putative (NCBI ptt file) | no data | 33 | 57 |