Homologs of GFF3698 from Variovorax sp. SCN45

ATP-dependent, 3'-5' DNA helicase with strand annealing activity
SEED: FIG003033: Helicase domain protein
KEGG: ATP-dependent helicase Lhr and Lhr-like helicase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF3698 ATP-dependent, 3'-5' DNA helicase with strand annealing activity insig. 100 100
o Variovorax sp. OAS795 ABID97_RS00385 ligase-associated DNA damage response DEXH box helicase insig. 90 93
o Ralstonia sp. UNC404CL21Col ABZR87_RS21360 ligase-associated DNA damage response DEXH box helicase insig. 67 94
o Pseudomonas simiae WCS417 PS417_06390 DEAD/DEAH box helicase insig. 66 89
o Acidovorax sp. GW101-3H11 Ac3H11_4923 FIG003033: Helicase domain protein insig. 63 93
o Pseudomonas fluorescens SBW25 PFLU_RS06455 ligase-associated DNA damage response DEXH box helicase insig. 66 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06455 ligase-associated DNA damage response DEXH box helicase insig. 66 89
o Pseudomonas syringae pv. syringae B728a Psyr_3880 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 66 89
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3880 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 66 89
o Pseudomonas sp. S08-1 OH686_06065 DEXH box helicase, DNA ligase-associated insig. 66 89
o Pseudomonas stutzeri RCH2 Psest_1647 Lhr-like helicases sig. 65 93
o Pseudomonas fluorescens FW300-N2C3 AO356_05520 DNA ligase-associated DEXH box helicase insig. 65 89
o Pseudomonas sp. RS175 PFR28_00502 hypothetical protein insig. 64 89
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2963 FIG003033: Helicase domain protein insig. 64 89
o Herbaspirillum seropedicae SmR1 HSERO_RS11390 DEAD/DEAH box helicase insig. 63 90
o Pseudomonas putida KT2440 PP_1103 ATP-dependent helicase, DEAD box family insig. 64 89
o Burkholderia phytofirmans PsJN BPHYT_RS22150 DEAD/DEAH box helicase insig. 60 92
o Paraburkholderia graminis OAS925 ABIE53_004154 ATP-dependent Lhr-like helicase insig. 60 89
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03145 ATP-dependent helicase Lhr and Lhr-like helicase insig. 61 89
o Paraburkholderia sabiae LMG 24235 QEN71_RS30600 ligase-associated DNA damage response DEXH box helicase insig. 60 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3657.1 FIG003033: Helicase domain protein insig. 51 89
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20800 ligase-associated DNA damage response DEXH box helicase insig. 45 89
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09090 DNA ligase-associated DEXH box helicase strong 44 90
o Azospirillum brasilense Sp245 AZOBR_RS09305 helicase insig. 36 90
o Rhizobium sp. OAE497 ABIE40_RS02475 ligase-associated DNA damage response DEXH box helicase insig. 35 87
o Dinoroseobacter shibae DFL-12 Dshi_1119 DNA damage response helicase, ligase-associated (from data) strong 35 91
o Phaeobacter inhibens DSM 17395 PGA1_c06040 DNA damage response helicase, ligase-associated (from data) sig. 34 90
o Caulobacter crescentus NA1000 CCNA_02121 ATP-dependent helicase strong 34 88
o Caulobacter crescentus NA1000 Δfur CCNA_02121 ATP-dependent helicase cofit 34 88
o Rhodopseudomonas palustris CGA009 TX73_004160 ligase-associated DNA damage response DEXH box helicase insig. 34 89
o Sinorhizobium meliloti 1021 SMc02237 DNA damage response helicase, ligase-associated (from data) strong 34 92
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1941 DNA damage response helicase, ligase-associated (from data) strong 36 88
o Azospirillum sp. SherDot2 MPMX19_01581 ATP-dependent RNA helicase DbpA insig. 36 86
o Bosea sp. OAE506 ABIE41_RS24120 ligase-associated DNA damage response DEXH box helicase insig. 37 88
o Alteromonas macleodii MIT1002 MIT1002_03764 ATP-dependent helicase insig. 35 80
o Agrobacterium fabrum C58 Atu0494 large atp-dependant helicase-related protein strong 35 86
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11475 ligase-associated DNA damage response DEXH box helicase insig. 34 85
  Methanococcus maripaludis S2 MMP_RS05890 ATP-dependent helicase insig. 27 84
  Methanococcus maripaludis JJ MMJJ_RS08465 ATP-dependent helicase insig. 27 84
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2235.1 Lhr-like helicases insig. 33 72
  Burkholderia phytofirmans PsJN BPHYT_RS27095 ATP-dependent DNA helicase insig. 29 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02925 ATP dependent helicase, Lhr family insig. 33 61
  Pantoea sp. MT58 IAI47_18890 ATP-dependent helicase insig. 29 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS10885 DEAD/DEAH box helicase insig. 33 63
  Paraburkholderia graminis OAS925 ABIE53_005864 ATP-dependent Lhr-like helicase strong 32 61
  Pseudomonas fluorescens FW300-N2C3 AO356_14865 ATP-dependent DNA helicase insig. 30 87
  Escherichia coli ECRC98 JDDGAC_02010 lhr ATP-dependent helicase cofit 27 90
  Escherichia coli ECRC100 OKFHMN_27420 lhr ATP-dependent helicase insig. 27 90
  Escherichia coli ECRC101 MCAODC_17990 lhr ATP-dependent helicase insig. 27 90
  Escherichia coli ECRC102 NIAGMN_00645 lhr ATP-dependent helicase insig. 27 90
  Escherichia coli ECRC99 KEDOAH_00690 lhr ATP-dependent helicase no data 27 90
  Variovorax sp. SCN45 GFF1558 Uncharacterized ATP-dependent DNA helicase PA3272 insig. 30 87
  Pseudomonas putida KT2440 PP_1061 putative ATP-dependent DNA helicase lhr insig. 30 72
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4905 Lhr-like helicases insig. 29 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1299 Lhr-like helicases insig. 28 87
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02072 ATP-dependent RNA helicase SrmB insig. 27 88
  Escherichia coli BL21 ECD_01623 putative ATP-dependent helicase insig. 27 88
  Escherichia coli BW25113 b1653 lhr predicted ATP-dependent helicase (NCBI) insig. 27 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2634 Lhr-like helicases insig. 29 84
  Escherichia coli ECOR38 HEPCGN_05805 lhr ATP-dependent helicase insig. 27 88
  Escherichia coli ECOR27 NOLOHH_17940 lhr ATP-dependent helicase insig. 27 88
  Escherichia coli ECRC62 BNILDI_16730 lhr ATP-dependent helicase cofit 27 88
  Pseudomonas sp. RS175 PFR28_03962 ATP-dependent RNA helicase SrmB insig. 29 87
  Pseudomonas fluorescens FW300-N2E3 AO353_06780 DNA repair helicase Lhr (from data) sig. 28 87
  Rhodanobacter sp. FW510-T8 OKGIIK_14210 ATP-dependent DNA helicase insig. 28 86
  Mycobacterium tuberculosis H37Rv Rv3296 Probable ATP-dependent helicase Lhr (large helicase-related protein) insig. 28 84
  Pseudomonas stutzeri RCH2 Psest_2922 Lhr-like helicases insig. 33 59
  Pseudomonas fluorescens SBW25 PFLU_RS26960 DEAD/DEAH box helicase insig. 29 68
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26960 DEAD/DEAH box helicase insig. 29 68
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07665 DEAD/DEAH box helicase insig. 28 59
  Rhodanobacter denitrificans MT42 LRK55_RS07400 DEAD/DEAH box helicase insig. 29 59
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14645 DNA repair helicase Lhr (from data) cofit 35 34
  Paraburkholderia sabiae LMG 24235 QEN71_RS21550 DEAD/DEAH box helicase insig. 28 70
  Klebsiella michiganensis M5al BWI76_RS21605 ATP-dependent helicase insig. 27 62
  Bifidobacterium breve UCC2003 BBR_RS16460 ATP-dependent helicase insig. 25 59
  Pseudomonas stutzeri RCH2 Psest_0914 Lhr-like helicases insig. 29 40
  Pseudomonas fluorescens FW300-N2E3 AO353_24235 DEAD/DEAH box helicase insig. 30 35
  Bifidobacterium breve UCC2003 BBR_RS16460 ATP-dependent helicase insig. 40 19
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14645 DNA repair helicase Lhr (from data) cofit 35 22
  Rhodanobacter denitrificans MT42 LRK55_RS07400 DEAD/DEAH box helicase insig. 35 22
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07665 DEAD/DEAH box helicase insig. 34 23
  Methanococcus maripaludis S2 MMP_RS02620 DEAD/DEAH box helicase insig. 25 40
  Desulfovibrio vulgaris Hildenborough JW710 DVU0256 ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) insig. 27 42
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.67.1 ATP-dependent RNA helicase insig. 25 48
  Lysobacter sp. OAE881 ABIE51_RS14440 DEAD/DEAH box helicase insig. 24 48
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS03955 DEAD/DEAH box helicase cofit 26 41
  Mycobacterium tuberculosis H37Rv Rv3649 Probable helicase insig. 26 41
  Methanococcus maripaludis JJ MMJJ_RS00510 DEAD/DEAH box helicase insig. 22 35
  Pseudomonas putida KT2440 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis strong 27 37
  Methanococcus maripaludis S2 MMP_RS04625 DEAD/DEAH box helicase sig. 22 33
  Shewanella amazonensis SB2B Sama_2742 ATP-dependent RNA helicase SrmB (RefSeq) cofit 27 39
  Caulobacter crescentus NA1000 CCNA_00878 ATP-dependent RNA helicase cofit 27 37
  Caulobacter crescentus NA1000 Δfur CCNA_00878 ATP-dependent RNA helicase cofit 27 37
  Pseudomonas fluorescens SBW25 PFLU_RS22195 DEAD/DEAH box helicase strong 24 36
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22195 DEAD/DEAH box helicase strong 24 36
  Pseudomonas simiae WCS417 PS417_20275 RNA helicase no data 24 36
  Variovorax sp. SCN45 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) insig. 25 40
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_543 ATP-dependent RNA helicase SrmB no data 24 36
  Pseudomonas sp. RS175 PFR28_00756 ATP-dependent RNA helicase RhlE insig. 24 36
  Pseudomonas fluorescens FW300-N2E3 AO353_18305 RNA helicase sig. 24 36