Homologs of GFF3614 from Variovorax sp. SCN45

UPF0056 inner membrane protein YchE
SEED: Multiple antibiotic resistance protein marC
KEGG: multiple antibiotic resistance protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF3614 UPF0056 inner membrane protein YchE insig. 100 100
o Variovorax sp. OAS795 ABID97_RS00755 MarC family protein insig. 95 98
o Acidovorax sp. GW101-3H11 Ac3H11_2153 Multiple antibiotic resistance (MarC) -related proteins insig. 73 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1820 Multiple antibiotic resistance protein marC insig. 70 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS06830 membrane protein no data 52 97
o Ralstonia solanacearum GMI1000 RS_RS14775 membrane protein no data 52 97
o Ralstonia solanacearum UW163 UW163_RS06785 membrane protein no data 52 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS02485 MarC family protein insig. 51 97
o Ralstonia solanacearum PSI07 RPSI07_RS10405 membrane protein no data 52 97
o Cupriavidus basilensis FW507-4G11 RR42_RS18900 membrane protein strong 50 97
o Burkholderia phytofirmans PsJN BPHYT_RS17695 membrane protein insig. 49 97
o Paraburkholderia graminis OAS925 ABIE53_003698 multiple antibiotic resistance protein sig. 49 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05656 multiple antibiotic resistance protein insig. 48 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS27850 MarC family protein cofit 48 97
o Methylophilus sp. DMC18 GFF2552 hypothetical protein insig. 45 98
o Shewanella amazonensis SB2B Sama_1694 hypothetical protein (RefSeq) strong 43 94
o Shewanella loihica PV-4 Shew_1911 hypothetical protein (RefSeq) no data 41 97
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_22725 YchE family NAAT transporter insig. 40 94
o Erwinia tracheiphila SCR3 LU632_RS12890 YchE family NAAT transporter sig. 40 94
o Shewanella oneidensis MR-1 SO2137 conserved hypothetical protein TIGR00427 (NCBI ptt file) sig. 38 95
o Shewanella sp. ANA-3 Shewana3_1789 hypothetical protein (RefSeq) sig. 38 95
o Enterobacter asburiae PDN3 EX28DRAFT_0866 membrane protein, MarC family insig. 37 94
o Enterobacter sp. TBS_079 MPMX20_02588 hypothetical protein insig. 37 94
o Klebsiella michiganensis M5al BWI76_RS17245 hypothetical protein insig. 38 94
o Serratia liquefaciens MT49 IAI46_14215 YchE family NAAT transporter insig. 38 94
o Klebsiella pneumoniae MKP103 KDGMDA_24480 YchE family NAAT transporter insig. 39 94
o Escherichia coli BL21 ECD_01216 UPF0056 family inner membrane protein insig. 37 94
o Escherichia fergusonii Becca EFB2_02685 hypothetical protein insig. 37 94
o Escherichia coli ECOR38 HEPCGN_25080 ychE NAAT family transporter YchE insig. 37 94
o Escherichia coli ECRC100 OKFHMN_28615 ychE NAAT family transporter YchE cofit 37 94
o Escherichia coli ECRC101 MCAODC_21645 ychE NAAT family transporter YchE insig. 37 94
o Escherichia coli ECRC102 NIAGMN_27620 ychE NAAT family transporter YchE insig. 37 94
o Escherichia coli ECRC98 JDDGAC_05960 ychE NAAT family transporter YchE cofit 37 94
o Escherichia coli ECRC99 KEDOAH_25610 ychE NAAT family transporter YchE no data 37 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02443 hypothetical protein insig. 37 94
o Escherichia coli Nissle 1917 ECOLIN_RS07505 NAAT family transporter YchE no data 37 94
o Escherichia coli BW25113 b1242 ychE predicted inner membrane protein (NCBI) sig. 37 94
o Erwinia amylovora T8 OLJFJH_13390 YchE family NAAT transporter insig. 38 94
o Escherichia coli ECOR27 NOLOHH_20435 ychE NAAT family transporter YchE insig. 37 94
o Escherichia coli ECRC62 BNILDI_18580 ychE NAAT family transporter YchE insig. 37 94
o Pantoea sp. MT58 IAI47_09060 YchE family NAAT transporter insig. 37 94
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02900 YchE family NAAT transporter insig. 37 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2748 Putative membrane protein insig. 37 94
o Dickeya dadantii 3937 DDA3937_RS10370 YchE family NAAT transporter sig. 38 94
o Dickeya dianthicola ME23 DZA65_RS10850 YchE family NAAT transporter insig. 38 94
o Dickeya dianthicola 67-19 HGI48_RS10375 YchE family NAAT transporter strong 37 94
o Rahnella sp. WP5 EX31_RS10070 YchE family NAAT transporter insig. 36 94
o Vibrio cholerae E7946 ATCC 55056 CSW01_10170 MarC family protein insig. 39 91
o Agrobacterium fabrum C58 Atu1508 hypothetical protein insig. 36 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS10700 MarC family protein insig. 35 93
o Phocaeicola dorei CL03T12C01 ABI39_RS01190 NAAT family transporter insig. 32 93
o Bacteroides thetaiotaomicron VPI-5482 BT2270 integral membrane protein (MarC family) (NCBI ptt file) sig. 32 90
o Bacteroides stercoris CC31F HMPREF1181_RS09550 NAAT family transporter insig. 32 94
o Phaeobacter inhibens DSM 17395 PGA1_c19770 membrane protein, MarC family sig. 39 92
o Bosea sp. OAE506 ABIE41_RS15150 MarC family protein no data 35 90
o Rhizobium sp. OAE497 ABIE40_RS09370 MarC family protein insig. 36 94
o Sinorhizobium meliloti 1021 SMc01232 hypothetical protein insig. 36 95
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00315 NAAT family transporter insig. 31 93
o Dinoroseobacter shibae DFL-12 Dshi_1348 multiple antibiotic resistance (MarC)-related protein (RefSeq) sig. 34 94
o Methanococcus maripaludis JJ MMJJ_RS03935 NAAT family transporter cofit 30 89
o Methanococcus maripaludis S2 MMP_RS01440 NAAT family transporter strong 30 89
  Bacteroides stercoris CC31F HMPREF1181_RS13025 MarC family protein insig. 32 89
  Bacteroides thetaiotaomicron VPI-5482 BT1108 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) sig. 32 89
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08220 MarC family protein insig. 32 89
o Bacteroides ovatus ATCC 8483 BACOVA_03076 membrane protein, MarC family insig. 36 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05435 MarC family protein sig. 32 89
o Azospirillum brasilense Sp245 AZOBR_RS25935 antibiotic resistance protein insig. 31 95
o Pseudomonas putida KT2440 PP_4825 Membrane protein, MarC family insig. 30 95
o Pseudomonas sp. BP01 JOY50_RS17610 MarC family protein insig. 30 95
o Castellaniella sp019104865 MT123 ABCV34_RS00685 MarC family protein insig. 32 94
o Rhodospirillum rubrum S1H Rru_A0654 Multiple antibiotic resistance (MarC)-related proteins (NCBI) strong 32 91
o Synechococcus elongatus PCC 7942 Synpcc7942_2083 Multiple antibiotic resistance (MarC)-related proteins insig. 33 91
o Pseudomonas simiae WCS417 PS417_02925 membrane protein insig. 31 91
o Pseudomonas sp. SVBP6 COO64_RS18290 MarC family protein insig. 29 95
o Caulobacter crescentus NA1000 CCNA_00105 MarC family integral membrane protein no data 34 88
o Caulobacter crescentus NA1000 Δfur CCNA_00105 MarC family integral membrane protein no data 34 88
o Xanthobacter sp. DMC5 GFF1576 hypothetical protein insig. 33 94
o Pseudomonas fluorescens SBW25 PFLU_RS03000 MarC family protein insig. 30 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS03000 MarC family protein sig. 30 91
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00817 hypothetical protein cofit 30 91
o Pseudomonas orientalis W4I3 QF045_RS05955 MarC family protein insig. 30 91
o Cellulophaga baltica 18 M666_RS11715 MarC family protein insig. 29 88
o Pseudomonas segetis P6 ACVTMO_RS20385 MarC family protein insig. 30 92
o Azospirillum sp. SherDot2 MPMX19_05023 hypothetical protein insig. 31 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS08795 MarC family protein insig. 32 90
o Pseudomonas fluorescens GW456-L13 PfGW456L13_60 membrane protein, MarC family insig. 30 91
o Pseudomonas sp. DMC3 GFF3305 hypothetical protein insig. 29 91
o Pseudomonas fluorescens FW300-N2E3 AO353_13635 hypothetical protein insig. 30 91
o Marinobacter adhaerens HP15 HP15_3589 multiple antibiotic resistance (MarC)-related protein insig. 31 86
  Synechococcus elongatus PCC 7942 Synpcc7942_1365 Multiple antibiotic resistance (MarC)-related proteins insig. 31 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3525 membrane protein, MarC family insig. 29 91
o Pseudomonas syringae pv. syringae B728a Psyr_4409 Multiple antibiotic resistance (MarC)-related protein insig. 28 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4409 Multiple antibiotic resistance (MarC)-related protein insig. 28 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1320 membrane protein, MarC family insig. 29 91
o Pseudomonas fluorescens FW300-N2C3 AO356_08255 hypothetical protein insig. 29 91
  Paraburkholderia graminis OAS925 ABIE53_005956 multiple antibiotic resistance protein insig. 33 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02837 multiple antibiotic resistance protein insig. 35 95
o Pseudomonas sp. RS175 PFR28_05211 hypothetical protein insig. 29 91
  Xanthobacter sp. DMC5 GFF3487 hypothetical protein insig. 32 91
o Pseudomonas aeruginosa MRSN321 DY961_RS10065 MarC family protein strong 29 91