Homologs of GFF3076 from Variovorax sp. SCN45

SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19)
SEED: Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal small subunit pseudouridine synthase A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) insig. 100 100
o Variovorax sp. OAS795 ABID97_RS09900 16S rRNA pseudouridine(516) synthase insig. 92 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5277 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) cofit 68 96
o Acidovorax sp. GW101-3H11 Ac3H11_4423 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 75 82
o Dechlorosoma suillum PS Dsui_0824 pseudouridine synthase family protein insig. 60 96
o Ralstonia solanacearum PSI07 RPSI07_RS20655 16S rRNA pseudouridine(516) synthase insig. 59 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS12605 16S rRNA pseudouridine(516) synthase insig. 60 95
o Ralstonia solanacearum UW163 UW163_RS00960 16S rRNA pseudouridine(516) synthase insig. 60 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS08605 pseudouridine synthase insig. 60 95
o Ralstonia solanacearum GMI1000 RS_RS03390 16S rRNA pseudouridine(516) synthase insig. 59 95
o Methylophilus sp. DMC18 GFF98 Ribosomal small subunit pseudouridine synthase A insig. 56 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS03150 16S rRNA pseudouridine(516) synthase insig. 52 96
o Cupriavidus basilensis FW507-4G11 RR42_RS15880 pseudouridine synthase insig. 59 96
o Burkholderia phytofirmans PsJN BPHYT_RS15560 pseudouridine synthase insig. 52 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04053 ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-) insig. 50 96
o Paraburkholderia graminis OAS925 ABIE53_003276 16S rRNA pseudouridine516 synthase insig. 51 96
o Herbaspirillum seropedicae SmR1 HSERO_RS08590 pseudouridine synthase insig. 47 96
o Acinetobacter baumannii LAC-4 RR41_RS07045 rRNA pseudouridine synthase sig. 45 94
o Acinetobacter radioresistens SK82 MPMX26_01203 Ribosomal small subunit pseudouridine synthase A insig. 43 98
o Pantoea sp. MT58 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA sig. 40 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00670 16S rRNA pseudouridine(516) synthase RsuA cofit 41 98
o Enterobacter asburiae PDN3 EX28DRAFT_0378 pseudouridine synthase insig. 42 96
o Caulobacter crescentus NA1000 CCNA_01915 ribosomal small subunit pseudouridine synthase A strong 44 92
o Caulobacter crescentus NA1000 Δfur CCNA_01915 ribosomal small subunit pseudouridine synthase A cofit 44 92
o Klebsiella michiganensis M5al BWI76_RS19810 16S rRNA pseudouridine(516) synthase no data 41 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 42 94
o Enterobacter sp. TBS_079 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A insig. 41 96
o Klebsiella pneumoniae MKP103 KDGMDA_26750 16S rRNA pseudouridine(516) synthase RsuA insig. 41 95
o Klebsiella pneumoniae MRSN742743 KFA93_RS06395 rsuA;inference=COORDINATES 16S rRNA pseudouridine(516) synthase RsuA sig. 41 95
o Rahnella sp. WP5 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA insig. 39 98
o Serratia liquefaciens MT49 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA insig. 41 97
o Shewanella sp. ANA-3 Shewana3_0760 ribosomal small subunit pseudouridine synthase A (RefSeq) insig. 42 90
o Escherichia coli BL21 ECD_02113 16S rRNA pseudouridine(516) synthase insig. 41 94
o Escherichia fergusonii Becca EFB2_01673 Ribosomal small subunit pseudouridine synthase A insig. 41 94
o Escherichia coli ECOR27 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 41 94
o Escherichia coli ECRC100 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 41 94
o Escherichia coli ECRC101 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 41 94
o Escherichia coli ECRC102 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 41 94
o Escherichia coli ECRC62 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 41 94
o Escherichia coli ECRC98 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 41 94
o Escherichia coli ECRC99 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 41 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A insig. 41 94
o Escherichia coli Nissle 1917 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA no data 41 94
o Escherichia coli BW25113 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) strong 41 94
o Escherichia coli ECOR38 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 41 94
o Shewanella loihica PV-4 Shew_2975 pseudouridine synthase (RefSeq) insig. 38 96
o Pectobacterium carotovorum WPP14 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA insig. 40 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_16035 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 38 100
o Erwinia tracheiphila SCR3 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 38 100
o Shewanella amazonensis SB2B Sama_2614 pseudouridine synthase, Rsu (RefSeq) insig. 40 96
o Magnetospirillum magneticum AMB-1 AMB_RS12445 rRNA pseudouridine synthase insig. 42 95
o Erwinia amylovora T8 OLJFJH_11710 16S rRNA pseudouridine(516) synthase RsuA insig. 38 96
o Dickeya dianthicola ME23 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA insig. 40 96
o Dickeya dianthicola 67-19 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA insig. 40 96
o Dickeya dadantii 3937 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA insig. 39 96
o Lysobacter sp. OAE881 ABIE51_RS18480 pseudouridine synthase cofit 41 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS00325 16S rRNA pseudouridine(516) synthase insig. 39 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_08220 16S rRNA pseudouridine(516) synthase insig. 40 90
o Rhodanobacter sp. FW510-T8 OKGIIK_09050 Pseudouridine synthase insig. 41 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS15935 rRNA pseudouridine synthase strong 40 97
o Rhodanobacter denitrificans MT42 LRK55_RS15690 pseudouridine synthase cofit 40 97
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12840 rRNA pseudouridine synthase insig. 40 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4611.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 39 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11350 pseudouridine synthase insig. 42 94
o Marinobacter adhaerens HP15 HP15_2675 pseudouridine synthase, Rsu insig. 34 94
  Marinobacter adhaerens HP15 HP15_3359 pseudouridine synthase, Rsu insig. 40 96
  Shewanella loihica PV-4 Shew_0916 pseudouridine synthase (RefSeq) insig. 35 90
o Pseudomonas aeruginosa PUPa3 DQ20_RS44005 16S rRNA pseudouridine(516) synthase insig. 36 90
o Pseudomonas aeruginosa MRSN321 DY961_RS08850 pseudouridine synthase insig. 35 90
o Pseudomonas sp. BP01 JOY50_RS14575 pseudouridine synthase insig. 34 88
  Shewanella amazonensis SB2B Sama_2785 pseudouridine synthase, Rsu (RefSeq) insig. 35 92
  Pseudomonas syringae pv. syringae B728a Psyr_3981 ribosomal small subunit pseudouridine synthase A insig. 35 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3981 ribosomal small subunit pseudouridine synthase A insig. 35 85
  Pseudomonas putida KT2440 PP_1409 ribosomal small subunit pseudouridine synthase A insig. 34 88
  Pseudomonas aeruginosa PA14 IKLFDK_03105 Ribosomal small subunit pseudouridine synthase A insig. 36 90
  Pseudomonas sp. SVBP6 COO64_RS16420 pseudouridine synthase insig. 33 96
  Fusobacterium nucleatum SB010 HUW76_04445 rRNA pseudouridine synthase cofit 32 94
  Pseudomonas fluorescens SBW25 PFLU_RS07085 pseudouridine synthase insig. 34 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07085 pseudouridine synthase insig. 34 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01553 Ribosomal small subunit pseudouridine synthase A insig. 33 90
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07850 pseudouridine synthase insig. 37 92
  Pseudomonas segetis P6 ACVTMO_RS06785 pseudouridine synthase insig. 33 96
  Pseudomonas simiae WCS417 PS417_07010 pseudouridine synthase insig. 33 90
  Pseudomonas orientalis W4I3 QF045_RS09740 16S rRNA pseudouridine(516) synthase cofit 33 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4535 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 32 91
  Pectobacterium carotovorum WPP14 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB strong 32 95
  Shewanella sp. ANA-3 Shewana3_3175 pseudouridine synthase, Rsu (RefSeq) insig. 38 71
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3297 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 31 91
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 29 96
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08925 23S rRNA pseudouridine synthase F insig. 31 96
  Mycobacterium tuberculosis H37Rv Rv1711 Conserved hypothetical protein no data 33 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2785 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 32 90
  Pseudomonas sp. RS175 PFR28_00665 Ribosomal small subunit pseudouridine synthase A insig. 32 86
  Pseudomonas sp. DMC3 GFF2251 Ribosomal small subunit pseudouridine synthase A cofit 31 89
  Dickeya dianthicola ME23 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB sig. 31 95
  Pseudomonas fluorescens FW300-N2E3 AO353_17535 16S rRNA pseudouridine(516) synthase insig. 31 91
  Dickeya dianthicola 67-19 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB sig. 31 95
  Serratia liquefaciens MT49 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB insig. 30 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) sig. 32 96
  Desulfovibrio vulgaris Miyazaki F DvMF_0369 pseudouridine synthase (RefSeq) sig. 35 97